Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1319:1320
Extra
PDB:
ATOM 1 O3' C A 318 60.165 -33.647 131.051 1.00 52.89 O
ATOM 2 P U A 319 60.701 -33.016 129.666 1.00 56.49 P
ATOM 3 OP1 U A 319 61.136 -31.622 129.944 1.00 56.48 O
ATOM 4 OP2 U A 319 59.640 -33.228 128.638 1.00 55.96 O
ATOM 5 O5' U A 319 61.964 -33.921 129.339 1.00 56.66 O
ATOM 6 C5' U A 319 63.117 -33.871 130.151 1.00 57.16 C
ATOM 7 C4' U A 319 64.143 -34.876 129.719 1.00 57.29 C
ATOM 8 O4' U A 319 63.586 -36.194 129.749 1.00 57.42 O
ATOM 9 C3' U A 319 64.645 -34.718 128.311 1.00 56.76 C
ATOM 10 O3' U A 319 65.657 -33.738 128.239 1.00 56.75 O
ATOM 11 C2' U A 319 65.135 -36.113 127.957 1.00 56.91 C
ATOM 12 O2' U A 319 66.451 -36.289 128.401 1.00 57.33 O
ATOM 13 C1' U A 319 64.236 -37.003 128.806 1.00 57.26 C
ATOM 14 N1 U A 319 63.225 -37.729 128.012 1.00 56.90 N
ATOM 15 C2 U A 319 63.633 -38.808 127.272 1.00 56.86 C
ATOM 16 O2 U A 319 64.775 -39.172 127.219 1.00 57.08 O
ATOM 17 N3 U A 319 62.665 -39.454 126.573 1.00 56.55 N
ATOM 18 C4 U A 319 61.340 -39.114 126.578 1.00 56.30 C
ATOM 19 O4 U A 319 60.546 -39.777 125.912 1.00 56.05 O
ATOM 20 C5 U A 319 60.985 -38.001 127.381 1.00 56.37 C
ATOM 21 C6 U A 319 61.915 -37.362 128.058 1.00 56.67 C
ATOM 22 P A A 320 65.560 -32.532 127.187 1.00 50.48 P
ATOM 23 OP1 A A 320 64.786 -31.408 127.847 1.00 50.48 O
ATOM 24 OP2 A A 320 65.032 -33.141 125.904 1.00 49.98 O
ATOM 25 O5' A A 320 67.096 -32.115 127.043 1.00 50.62 O
TER
ATOM 1 O3' U B 319 65.657 -33.738 128.239 1.00 56.75 O
ATOM 2 P A B 320 65.560 -32.532 127.187 1.00 50.48 P
ATOM 3 OP1 A B 320 64.786 -31.408 127.847 1.00 50.48 O
ATOM 4 OP2 A B 320 65.032 -33.141 125.904 1.00 49.98 O
ATOM 5 O5' A B 320 67.096 -32.115 127.043 1.00 50.62 O
ATOM 6 C5' A B 320 67.716 -32.091 125.787 1.00 50.22 C
ATOM 7 C4' A B 320 69.150 -32.465 125.879 1.00 50.55 C
ATOM 8 O4' A B 320 69.273 -33.766 126.462 1.00 50.99 O
ATOM 9 C3' A B 320 69.866 -32.566 124.560 1.00 50.18 C
ATOM 10 O3' A B 320 70.331 -31.317 124.127 1.00 49.92 O
ATOM 11 C2' A B 320 70.972 -33.586 124.817 1.00 50.62 C
ATOM 12 O2' A B 320 72.114 -32.969 125.380 1.00 50.96 O
ATOM 13 C1' A B 320 70.336 -34.476 125.870 1.00 51.05 C
ATOM 14 N9 A B 320 69.789 -35.712 125.305 1.00 50.92 N
ATOM 15 C8 A B 320 68.453 -36.026 125.274 1.00 50.73 C
ATOM 16 N7 A B 320 68.220 -37.196 124.780 1.00 50.69 N
ATOM 17 C5 A B 320 69.470 -37.671 124.461 1.00 50.86 C
ATOM 18 C6 A B 320 69.893 -38.879 123.875 1.00 50.93 C
ATOM 19 N6 A B 320 69.035 -39.822 123.511 1.00 50.81 N
ATOM 20 N1 A B 320 71.220 -39.094 123.677 1.00 51.13 N
ATOM 21 C2 A B 320 72.037 -38.103 124.058 1.00 51.25 C
ATOM 22 N3 A B 320 71.742 -36.915 124.608 1.00 51.20 N
ATOM 23 C4 A B 320 70.440 -36.768 124.792 1.00 51.01 C
ATOM 24 P A B 321 70.042 -30.851 122.650 1.00 53.75 P
ATOM 25 OP1 A B 321 70.573 -29.491 122.517 1.00 53.63 O
ATOM 26 OP2 A B 321 68.625 -31.077 122.401 1.00 53.45 O
ATOM 27 O5' A B 321 70.903 -31.878 121.789 1.00 53.72 O
TER
ATOM 2 P U A 319 60.701 -33.016 129.666 1.00 56.49 P
ATOM 3 OP1 U A 319 61.136 -31.622 129.944 1.00 56.48 O
ATOM 4 OP2 U A 319 59.640 -33.228 128.638 1.00 55.96 O
ATOM 5 O5' U A 319 61.964 -33.921 129.339 1.00 56.66 O
ATOM 6 C5' U A 319 63.117 -33.871 130.151 1.00 57.16 C
ATOM 7 C4' U A 319 64.143 -34.876 129.719 1.00 57.29 C
ATOM 8 O4' U A 319 63.586 -36.194 129.749 1.00 57.42 O
ATOM 9 C3' U A 319 64.645 -34.718 128.311 1.00 56.76 C
ATOM 10 O3' U A 319 65.657 -33.738 128.239 1.00 56.75 O
ATOM 11 C2' U A 319 65.135 -36.113 127.957 1.00 56.91 C
ATOM 12 O2' U A 319 66.451 -36.289 128.401 1.00 57.33 O
ATOM 13 C1' U A 319 64.236 -37.003 128.806 1.00 57.26 C
ATOM 14 N1 U A 319 63.225 -37.729 128.012 1.00 56.90 N
ATOM 15 C2 U A 319 63.633 -38.808 127.272 1.00 56.86 C
ATOM 16 O2 U A 319 64.775 -39.172 127.219 1.00 57.08 O
ATOM 17 N3 U A 319 62.665 -39.454 126.573 1.00 56.55 N
ATOM 18 C4 U A 319 61.340 -39.114 126.578 1.00 56.30 C
ATOM 19 O4 U A 319 60.546 -39.777 125.912 1.00 56.05 O
ATOM 20 C5 U A 319 60.985 -38.001 127.381 1.00 56.37 C
ATOM 21 C6 U A 319 61.915 -37.362 128.058 1.00 56.67 C
ATOM 22 P A A 320 65.560 -32.532 127.187 1.00 50.48 P
ATOM 23 OP1 A A 320 64.786 -31.408 127.847 1.00 50.48 O
ATOM 24 OP2 A A 320 65.032 -33.141 125.904 1.00 49.98 O
ATOM 25 O5' A A 320 67.096 -32.115 127.043 1.00 50.62 O
TER
ATOM 1 O3' U B 319 65.657 -33.738 128.239 1.00 56.75 O
ATOM 2 P A B 320 65.560 -32.532 127.187 1.00 50.48 P
ATOM 3 OP1 A B 320 64.786 -31.408 127.847 1.00 50.48 O
ATOM 4 OP2 A B 320 65.032 -33.141 125.904 1.00 49.98 O
ATOM 5 O5' A B 320 67.096 -32.115 127.043 1.00 50.62 O
ATOM 6 C5' A B 320 67.716 -32.091 125.787 1.00 50.22 C
ATOM 7 C4' A B 320 69.150 -32.465 125.879 1.00 50.55 C
ATOM 8 O4' A B 320 69.273 -33.766 126.462 1.00 50.99 O
ATOM 9 C3' A B 320 69.866 -32.566 124.560 1.00 50.18 C
ATOM 10 O3' A B 320 70.331 -31.317 124.127 1.00 49.92 O
ATOM 11 C2' A B 320 70.972 -33.586 124.817 1.00 50.62 C
ATOM 12 O2' A B 320 72.114 -32.969 125.380 1.00 50.96 O
ATOM 13 C1' A B 320 70.336 -34.476 125.870 1.00 51.05 C
ATOM 14 N9 A B 320 69.789 -35.712 125.305 1.00 50.92 N
ATOM 15 C8 A B 320 68.453 -36.026 125.274 1.00 50.73 C
ATOM 16 N7 A B 320 68.220 -37.196 124.780 1.00 50.69 N
ATOM 17 C5 A B 320 69.470 -37.671 124.461 1.00 50.86 C
ATOM 18 C6 A B 320 69.893 -38.879 123.875 1.00 50.93 C
ATOM 19 N6 A B 320 69.035 -39.822 123.511 1.00 50.81 N
ATOM 20 N1 A B 320 71.220 -39.094 123.677 1.00 51.13 N
ATOM 21 C2 A B 320 72.037 -38.103 124.058 1.00 51.25 C
ATOM 22 N3 A B 320 71.742 -36.915 124.608 1.00 51.20 N
ATOM 23 C4 A B 320 70.440 -36.768 124.792 1.00 51.01 C
ATOM 24 P A B 321 70.042 -30.851 122.650 1.00 53.75 P
ATOM 25 OP1 A B 321 70.573 -29.491 122.517 1.00 53.63 O
ATOM 26 OP2 A B 321 68.625 -31.077 122.401 1.00 53.45 O
ATOM 27 O5' A B 321 70.903 -31.878 121.789 1.00 53.72 O
TER
Atoms:
C4: (61.340,-39.114,126.578)
N3: (62.665,-39.454,126.573)
OP1: (61.136,-31.622,129.944)
OP2: (59.640,-33.228,128.638)
C2: (63.633,-38.808,127.272)
C1': (64.236,-37.003,128.806)
C3': (64.645,-34.718,128.311)
O5': (61.964,-33.921,129.339)
O4': (63.586,-36.194,129.749)
C5': (63.117,-33.871,130.151)
P: (60.701,-33.016,129.666)
C4': (64.143,-34.876,129.719)
C2': (65.135,-36.113,127.957)
O2': (66.451,-36.289,128.401)
N1: (63.225,-37.729,128.012)
O4: (60.546,-39.777,125.912)
O2: (64.775,-39.172,127.219)
C6: (61.915,-37.362,128.058)
C5: (60.985,-38.001,127.381)
O3': (65.657,-33.738,128.239)
N3: (62.665,-39.454,126.573)
OP1: (61.136,-31.622,129.944)
OP2: (59.640,-33.228,128.638)
C2: (63.633,-38.808,127.272)
C1': (64.236,-37.003,128.806)
C3': (64.645,-34.718,128.311)
O5': (61.964,-33.921,129.339)
O4': (63.586,-36.194,129.749)
C5': (63.117,-33.871,130.151)
P: (60.701,-33.016,129.666)
C4': (64.143,-34.876,129.719)
C2': (65.135,-36.113,127.957)
O2': (66.451,-36.289,128.401)
N1: (63.225,-37.729,128.012)
O4: (60.546,-39.777,125.912)
O2: (64.775,-39.172,127.219)
C6: (61.915,-37.362,128.058)
C5: (60.985,-38.001,127.381)
O3': (65.657,-33.738,128.239)
OP1: (64.786,-31.408,127.847)
OP2: (65.032,-33.141,125.904)
C3': (69.866,-32.566,124.560)
C1': (70.336,-34.476,125.870)
C5': (67.716,-32.091,125.787)
O4': (69.273,-33.766,126.462)
C8: (68.453,-36.026,125.274)
O2': (72.114,-32.969,125.380)
C6: (69.893,-38.879,123.875)
C5: (69.470,-37.671,124.461)
C4: (70.440,-36.768,124.792)
P: (65.560,-32.532,127.187)
C4': (69.150,-32.465,125.879)
C2': (70.972,-33.586,124.817)
C2: (72.037,-38.103,124.058)
N1: (71.220,-39.094,123.677)
N3: (71.742,-36.915,124.608)
N6: (69.035,-39.822,123.511)
N7: (68.220,-37.196,124.780)
N9: (69.789,-35.712,125.305)
O5': (67.096,-32.115,127.043)
O3': (70.331,-31.317,124.127)
OP2: (65.032,-33.141,125.904)
C3': (69.866,-32.566,124.560)
C1': (70.336,-34.476,125.870)
C5': (67.716,-32.091,125.787)
O4': (69.273,-33.766,126.462)
C8: (68.453,-36.026,125.274)
O2': (72.114,-32.969,125.380)
C6: (69.893,-38.879,123.875)
C5: (69.470,-37.671,124.461)
C4: (70.440,-36.768,124.792)
P: (65.560,-32.532,127.187)
C4': (69.150,-32.465,125.879)
C2': (70.972,-33.586,124.817)
C2: (72.037,-38.103,124.058)
N1: (71.220,-39.094,123.677)
N3: (71.742,-36.915,124.608)
N6: (69.035,-39.822,123.511)
N7: (68.220,-37.196,124.780)
N9: (69.789,-35.712,125.305)
O5': (67.096,-32.115,127.043)
O3': (70.331,-31.317,124.127)
Image (generated by PyMOL):