Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0522:0523
Extra
PDB:
ATOM 1 O3' U A 521 22.476 135.633 113.373 1.00 47.06 O
ATOM 2 P C A 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 3 OP1 C A 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 4 OP2 C A 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 5 O5' C A 522 22.971 134.755 111.085 1.00 52.56 O
ATOM 6 C5' C A 522 23.547 133.455 111.209 1.00 55.52 C
ATOM 7 C4' C A 522 24.990 133.504 110.815 1.00 55.93 C
ATOM 8 O4' C A 522 25.673 134.463 111.646 1.00 57.08 O
ATOM 9 C3' C A 522 25.753 132.221 111.053 1.00 56.85 C
ATOM 10 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 11 C2' C A 522 27.199 132.712 111.104 1.00 57.86 C
ATOM 12 O2' C A 522 27.741 132.889 109.813 1.00 59.36 O
ATOM 13 C1' C A 522 27.035 134.103 111.731 1.00 57.62 C
ATOM 14 N1 C A 522 27.496 134.315 113.115 1.00 57.25 N
ATOM 15 C2 C A 522 28.534 135.223 113.335 1.00 55.91 C
ATOM 16 O2 C A 522 29.056 135.780 112.366 1.00 55.16 O
ATOM 17 N3 C A 522 28.946 135.468 114.594 1.00 57.50 N
ATOM 18 C4 C A 522 28.372 134.839 115.618 1.00 58.93 C
ATOM 19 N4 C A 522 28.819 135.120 116.846 1.00 59.75 N
ATOM 20 C5 C A 522 27.317 133.893 115.428 1.00 58.09 C
ATOM 21 C6 C A 522 26.916 133.662 114.170 1.00 57.27 C
ATOM 22 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 23 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 24 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 25 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
TER
ATOM 1 O3' C B 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 2 P G B 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 3 OP1 G B 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 4 OP2 G B 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 5 O5' G B 523 26.877 129.411 109.249 1.00 56.85 O
ATOM 6 C5' G B 523 27.019 129.890 107.911 1.00 53.37 C
ATOM 7 C4' G B 523 28.252 129.315 107.271 1.00 51.77 C
ATOM 8 O4' G B 523 29.432 129.885 107.891 1.00 51.59 O
ATOM 9 C3' G B 523 28.438 127.804 107.354 1.00 51.42 C
ATOM 10 O3' G B 523 29.046 127.446 106.125 1.00 52.85 O
ATOM 11 C2' G B 523 29.471 127.665 108.473 1.00 49.75 C
ATOM 12 O2' G B 523 30.246 126.493 108.407 1.00 50.38 O
ATOM 13 C1' G B 523 30.352 128.852 108.139 1.00 50.19 C
ATOM 14 N9 G B 523 31.337 129.323 109.102 1.00 50.30 N
ATOM 15 C8 G B 523 31.224 129.434 110.465 1.00 50.88 C
ATOM 16 N7 G B 523 32.276 129.974 111.018 1.00 49.64 N
ATOM 17 C5 G B 523 33.132 130.220 109.956 1.00 48.34 C
ATOM 18 C6 G B 523 34.404 130.818 109.927 1.00 47.90 C
ATOM 19 O6 G B 523 35.047 131.297 110.860 1.00 48.94 O
ATOM 20 N1 G B 523 34.925 130.844 108.642 1.00 46.97 N
ATOM 21 C2 G B 523 34.295 130.367 107.528 1.00 46.78 C
ATOM 22 N2 G B 523 34.970 130.443 106.381 1.00 48.91 N
ATOM 23 N3 G B 523 33.096 129.842 107.537 1.00 46.92 N
ATOM 24 C4 G B 523 32.577 129.797 108.775 1.00 48.72 C
ATOM 25 P A B 524 28.551 126.148 105.336 1.00 55.70 P
ATOM 26 OP1 A B 524 27.138 126.359 104.932 1.00 55.39 O
ATOM 27 OP2 A B 524 28.912 124.951 106.143 1.00 54.21 O
ATOM 28 O5' A B 524 29.476 126.148 104.039 1.00 54.96 O
TER
ATOM 2 P C A 522 21.760 135.192 112.010 1.00 50.94 P
ATOM 3 OP1 C A 522 21.218 136.425 111.390 1.00 53.18 O
ATOM 4 OP2 C A 522 20.871 134.009 112.220 1.00 48.52 O
ATOM 5 O5' C A 522 22.971 134.755 111.085 1.00 52.56 O
ATOM 6 C5' C A 522 23.547 133.455 111.209 1.00 55.52 C
ATOM 7 C4' C A 522 24.990 133.504 110.815 1.00 55.93 C
ATOM 8 O4' C A 522 25.673 134.463 111.646 1.00 57.08 O
ATOM 9 C3' C A 522 25.753 132.221 111.053 1.00 56.85 C
ATOM 10 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 11 C2' C A 522 27.199 132.712 111.104 1.00 57.86 C
ATOM 12 O2' C A 522 27.741 132.889 109.813 1.00 59.36 O
ATOM 13 C1' C A 522 27.035 134.103 111.731 1.00 57.62 C
ATOM 14 N1 C A 522 27.496 134.315 113.115 1.00 57.25 N
ATOM 15 C2 C A 522 28.534 135.223 113.335 1.00 55.91 C
ATOM 16 O2 C A 522 29.056 135.780 112.366 1.00 55.16 O
ATOM 17 N3 C A 522 28.946 135.468 114.594 1.00 57.50 N
ATOM 18 C4 C A 522 28.372 134.839 115.618 1.00 58.93 C
ATOM 19 N4 C A 522 28.819 135.120 116.846 1.00 59.75 N
ATOM 20 C5 C A 522 27.317 133.893 115.428 1.00 58.09 C
ATOM 21 C6 C A 522 26.916 133.662 114.170 1.00 57.27 C
ATOM 22 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 23 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 24 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 25 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
TER
ATOM 1 O3' C B 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 2 P G B 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 3 OP1 G B 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 4 OP2 G B 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 5 O5' G B 523 26.877 129.411 109.249 1.00 56.85 O
ATOM 6 C5' G B 523 27.019 129.890 107.911 1.00 53.37 C
ATOM 7 C4' G B 523 28.252 129.315 107.271 1.00 51.77 C
ATOM 8 O4' G B 523 29.432 129.885 107.891 1.00 51.59 O
ATOM 9 C3' G B 523 28.438 127.804 107.354 1.00 51.42 C
ATOM 10 O3' G B 523 29.046 127.446 106.125 1.00 52.85 O
ATOM 11 C2' G B 523 29.471 127.665 108.473 1.00 49.75 C
ATOM 12 O2' G B 523 30.246 126.493 108.407 1.00 50.38 O
ATOM 13 C1' G B 523 30.352 128.852 108.139 1.00 50.19 C
ATOM 14 N9 G B 523 31.337 129.323 109.102 1.00 50.30 N
ATOM 15 C8 G B 523 31.224 129.434 110.465 1.00 50.88 C
ATOM 16 N7 G B 523 32.276 129.974 111.018 1.00 49.64 N
ATOM 17 C5 G B 523 33.132 130.220 109.956 1.00 48.34 C
ATOM 18 C6 G B 523 34.404 130.818 109.927 1.00 47.90 C
ATOM 19 O6 G B 523 35.047 131.297 110.860 1.00 48.94 O
ATOM 20 N1 G B 523 34.925 130.844 108.642 1.00 46.97 N
ATOM 21 C2 G B 523 34.295 130.367 107.528 1.00 46.78 C
ATOM 22 N2 G B 523 34.970 130.443 106.381 1.00 48.91 N
ATOM 23 N3 G B 523 33.096 129.842 107.537 1.00 46.92 N
ATOM 24 C4 G B 523 32.577 129.797 108.775 1.00 48.72 C
ATOM 25 P A B 524 28.551 126.148 105.336 1.00 55.70 P
ATOM 26 OP1 A B 524 27.138 126.359 104.932 1.00 55.39 O
ATOM 27 OP2 A B 524 28.912 124.951 106.143 1.00 54.21 O
ATOM 28 O5' A B 524 29.476 126.148 104.039 1.00 54.96 O
TER
Atoms:
C2: (28.534,135.223,113.335)
OP1: (21.218,136.425,111.390)
OP2: (20.871,134.009,112.220)
C4: (28.372,134.839,115.618)
O5': (22.971,134.755,111.085)
C3': (25.753,132.221,111.053)
C1': (27.035,134.103,111.731)
O4': (25.673,134.463,111.646)
C5': (23.547,133.455,111.209)
P: (21.760,135.192,112.010)
O2: (29.056,135.780,112.366)
C4': (24.990,133.504,110.815)
C2': (27.199,132.712,111.104)
O2': (27.741,132.889,109.813)
N1: (27.496,134.315,113.115)
N3: (28.946,135.468,114.594)
N4: (28.819,135.120,116.846)
C6: (26.916,133.662,114.170)
C5: (27.317,133.893,115.428)
O3': (25.511,131.379,109.935)
OP1: (21.218,136.425,111.390)
OP2: (20.871,134.009,112.220)
C4: (28.372,134.839,115.618)
O5': (22.971,134.755,111.085)
C3': (25.753,132.221,111.053)
C1': (27.035,134.103,111.731)
O4': (25.673,134.463,111.646)
C5': (23.547,133.455,111.209)
P: (21.760,135.192,112.010)
O2: (29.056,135.780,112.366)
C4': (24.990,133.504,110.815)
C2': (27.199,132.712,111.104)
O2': (27.741,132.889,109.813)
N1: (27.496,134.315,113.115)
N3: (28.946,135.468,114.594)
N4: (28.819,135.120,116.846)
C6: (26.916,133.662,114.170)
C5: (27.317,133.893,115.428)
O3': (25.511,131.379,109.935)
OP1: (24.403,129.236,109.349)
OP2: (25.799,129.397,111.518)
C3': (28.438,127.804,107.354)
C1': (30.352,128.852,108.139)
C5': (27.019,129.890,107.911)
O6: (35.047,131.297,110.860)
O4': (29.432,129.885,107.891)
C8: (31.224,129.434,110.465)
C2: (34.295,130.367,107.528)
C6: (34.404,130.818,109.927)
C5: (33.132,130.220,109.956)
C4: (32.577,129.797,108.775)
P: (25.578,129.781,110.087)
C4': (28.252,129.315,107.271)
C2': (29.471,127.665,108.473)
O2': (30.246,126.493,108.407)
N1: (34.925,130.844,108.642)
N2: (34.970,130.443,106.381)
N3: (33.096,129.842,107.537)
N7: (32.276,129.974,111.018)
N9: (31.337,129.323,109.102)
O5': (26.877,129.411,109.249)
O3': (29.046,127.446,106.125)
OP2: (25.799,129.397,111.518)
C3': (28.438,127.804,107.354)
C1': (30.352,128.852,108.139)
C5': (27.019,129.890,107.911)
O6: (35.047,131.297,110.860)
O4': (29.432,129.885,107.891)
C8: (31.224,129.434,110.465)
C2: (34.295,130.367,107.528)
C6: (34.404,130.818,109.927)
C5: (33.132,130.220,109.956)
C4: (32.577,129.797,108.775)
P: (25.578,129.781,110.087)
C4': (28.252,129.315,107.271)
C2': (29.471,127.665,108.473)
O2': (30.246,126.493,108.407)
N1: (34.925,130.844,108.642)
N2: (34.970,130.443,106.381)
N3: (33.096,129.842,107.537)
N7: (32.276,129.974,111.018)
N9: (31.337,129.323,109.102)
O5': (26.877,129.411,109.249)
O3': (29.046,127.446,106.125)
Image (generated by PyMOL):