Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0522:0523
Extra
PDB:
ATOM 1 O3' U A 521 22.385 135.515 113.069 1.00 41.32 O
ATOM 2 P C A 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 3 OP1 C A 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 4 OP2 C A 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 5 O5' C A 522 22.900 134.577 110.816 1.00 44.53 O
ATOM 6 C5' C A 522 23.483 133.284 110.976 1.00 46.58 C
ATOM 7 C4' C A 522 24.906 133.316 110.511 1.00 47.48 C
ATOM 8 O4' C A 522 25.625 134.291 111.295 1.00 48.82 O
ATOM 9 C3' C A 522 25.673 132.029 110.715 1.00 48.89 C
ATOM 10 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 11 C2' C A 522 27.123 132.513 110.757 1.00 50.44 C
ATOM 12 O2' C A 522 27.667 132.692 109.468 1.00 53.14 O
ATOM 13 C1' C A 522 26.975 133.897 111.402 1.00 49.76 C
ATOM 14 N1 C A 522 27.411 134.097 112.797 1.00 49.65 N
ATOM 15 C2 C A 522 28.479 134.968 113.044 1.00 50.56 C
ATOM 16 O2 C A 522 29.067 135.483 112.084 1.00 50.15 O
ATOM 17 N3 C A 522 28.847 135.222 114.322 1.00 52.45 N
ATOM 18 C4 C A 522 28.202 134.633 115.333 1.00 52.79 C
ATOM 19 N4 C A 522 28.588 134.933 116.580 1.00 52.92 N
ATOM 20 C5 C A 522 27.131 133.714 115.111 1.00 51.39 C
ATOM 21 C6 C A 522 26.774 133.476 113.838 1.00 50.72 C
ATOM 22 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 23 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 24 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 25 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
TER
ATOM 1 O3' C B 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 2 P G B 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 3 OP1 G B 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 4 OP2 G B 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 5 O5' G B 523 26.978 129.351 108.919 1.00 46.58 O
ATOM 6 C5' G B 523 27.050 129.646 107.522 1.00 41.64 C
ATOM 7 C4' G B 523 28.263 128.990 106.919 1.00 40.09 C
ATOM 8 O4' G B 523 29.458 129.595 107.472 1.00 39.28 O
ATOM 9 C3' G B 523 28.416 127.493 107.175 1.00 39.57 C
ATOM 10 O3' G B 523 29.098 126.957 106.059 1.00 41.62 O
ATOM 11 C2' G B 523 29.402 127.465 108.332 1.00 39.07 C
ATOM 12 O2' G B 523 30.116 126.255 108.425 1.00 39.91 O
ATOM 13 C1' G B 523 30.330 128.574 107.877 1.00 39.79 C
ATOM 14 N9 G B 523 31.305 129.119 108.810 1.00 41.87 N
ATOM 15 C8 G B 523 31.204 129.262 110.171 1.00 43.25 C
ATOM 16 N7 G B 523 32.258 129.819 110.702 1.00 42.54 N
ATOM 17 C5 G B 523 33.101 130.048 109.626 1.00 42.27 C
ATOM 18 C6 G B 523 34.384 130.632 109.576 1.00 43.25 C
ATOM 19 O6 G B 523 35.065 131.081 110.507 1.00 44.10 O
ATOM 20 N1 G B 523 34.876 130.665 108.277 1.00 42.51 N
ATOM 21 C2 G B 523 34.220 130.188 107.174 1.00 42.76 C
ATOM 22 N2 G B 523 34.865 130.281 106.006 1.00 44.35 N
ATOM 23 N3 G B 523 33.023 129.650 107.209 1.00 41.86 N
ATOM 24 C4 G B 523 32.527 129.612 108.456 1.00 41.83 C
ATOM 25 P A B 524 28.333 126.000 105.038 1.00 44.41 P
ATOM 26 OP1 A B 524 27.105 126.711 104.610 1.00 45.65 O
ATOM 27 OP2 A B 524 28.229 124.641 105.625 1.00 43.61 O
ATOM 28 O5' A B 524 29.333 125.936 103.802 1.00 43.93 O
TER
ATOM 2 P C A 522 21.679 135.038 111.716 1.00 44.15 P
ATOM 3 OP1 C A 522 21.108 136.246 111.067 1.00 46.25 O
ATOM 4 OP2 C A 522 20.811 133.856 111.975 1.00 42.56 O
ATOM 5 O5' C A 522 22.900 134.577 110.816 1.00 44.53 O
ATOM 6 C5' C A 522 23.483 133.284 110.976 1.00 46.58 C
ATOM 7 C4' C A 522 24.906 133.316 110.511 1.00 47.48 C
ATOM 8 O4' C A 522 25.625 134.291 111.295 1.00 48.82 O
ATOM 9 C3' C A 522 25.673 132.029 110.715 1.00 48.89 C
ATOM 10 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 11 C2' C A 522 27.123 132.513 110.757 1.00 50.44 C
ATOM 12 O2' C A 522 27.667 132.692 109.468 1.00 53.14 O
ATOM 13 C1' C A 522 26.975 133.897 111.402 1.00 49.76 C
ATOM 14 N1 C A 522 27.411 134.097 112.797 1.00 49.65 N
ATOM 15 C2 C A 522 28.479 134.968 113.044 1.00 50.56 C
ATOM 16 O2 C A 522 29.067 135.483 112.084 1.00 50.15 O
ATOM 17 N3 C A 522 28.847 135.222 114.322 1.00 52.45 N
ATOM 18 C4 C A 522 28.202 134.633 115.333 1.00 52.79 C
ATOM 19 N4 C A 522 28.588 134.933 116.580 1.00 52.92 N
ATOM 20 C5 C A 522 27.131 133.714 115.111 1.00 51.39 C
ATOM 21 C6 C A 522 26.774 133.476 113.838 1.00 50.72 C
ATOM 22 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 23 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 24 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 25 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
TER
ATOM 1 O3' C B 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 2 P G B 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 3 OP1 G B 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 4 OP2 G B 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 5 O5' G B 523 26.978 129.351 108.919 1.00 46.58 O
ATOM 6 C5' G B 523 27.050 129.646 107.522 1.00 41.64 C
ATOM 7 C4' G B 523 28.263 128.990 106.919 1.00 40.09 C
ATOM 8 O4' G B 523 29.458 129.595 107.472 1.00 39.28 O
ATOM 9 C3' G B 523 28.416 127.493 107.175 1.00 39.57 C
ATOM 10 O3' G B 523 29.098 126.957 106.059 1.00 41.62 O
ATOM 11 C2' G B 523 29.402 127.465 108.332 1.00 39.07 C
ATOM 12 O2' G B 523 30.116 126.255 108.425 1.00 39.91 O
ATOM 13 C1' G B 523 30.330 128.574 107.877 1.00 39.79 C
ATOM 14 N9 G B 523 31.305 129.119 108.810 1.00 41.87 N
ATOM 15 C8 G B 523 31.204 129.262 110.171 1.00 43.25 C
ATOM 16 N7 G B 523 32.258 129.819 110.702 1.00 42.54 N
ATOM 17 C5 G B 523 33.101 130.048 109.626 1.00 42.27 C
ATOM 18 C6 G B 523 34.384 130.632 109.576 1.00 43.25 C
ATOM 19 O6 G B 523 35.065 131.081 110.507 1.00 44.10 O
ATOM 20 N1 G B 523 34.876 130.665 108.277 1.00 42.51 N
ATOM 21 C2 G B 523 34.220 130.188 107.174 1.00 42.76 C
ATOM 22 N2 G B 523 34.865 130.281 106.006 1.00 44.35 N
ATOM 23 N3 G B 523 33.023 129.650 107.209 1.00 41.86 N
ATOM 24 C4 G B 523 32.527 129.612 108.456 1.00 41.83 C
ATOM 25 P A B 524 28.333 126.000 105.038 1.00 44.41 P
ATOM 26 OP1 A B 524 27.105 126.711 104.610 1.00 45.65 O
ATOM 27 OP2 A B 524 28.229 124.641 105.625 1.00 43.61 O
ATOM 28 O5' A B 524 29.333 125.936 103.802 1.00 43.93 O
TER
Atoms:
C2: (28.479,134.968,113.044)
OP1: (21.108,136.246,111.067)
OP2: (20.811,133.856,111.975)
C4: (28.202,134.633,115.333)
O5': (22.900,134.577,110.816)
C3': (25.673,132.029,110.715)
C1': (26.975,133.897,111.402)
O4': (25.625,134.291,111.295)
C5': (23.483,133.284,110.976)
P: (21.679,135.038,111.716)
O2: (29.067,135.483,112.084)
C4': (24.906,133.316,110.511)
C2': (27.123,132.513,110.757)
O2': (27.667,132.692,109.468)
N1: (27.411,134.097,112.797)
N3: (28.847,135.222,114.322)
N4: (28.588,134.933,116.580)
C6: (26.774,133.476,113.838)
C5: (27.131,133.714,115.111)
O3': (25.401,131.170,109.607)
OP1: (21.108,136.246,111.067)
OP2: (20.811,133.856,111.975)
C4: (28.202,134.633,115.333)
O5': (22.900,134.577,110.816)
C3': (25.673,132.029,110.715)
C1': (26.975,133.897,111.402)
O4': (25.625,134.291,111.295)
C5': (23.483,133.284,110.976)
P: (21.679,135.038,111.716)
O2: (29.067,135.483,112.084)
C4': (24.906,133.316,110.511)
C2': (27.123,132.513,110.757)
O2': (27.667,132.692,109.468)
N1: (27.411,134.097,112.797)
N3: (28.847,135.222,114.322)
N4: (28.588,134.933,116.580)
C6: (26.774,133.476,113.838)
C5: (27.131,133.714,115.111)
O3': (25.401,131.170,109.607)
OP1: (24.533,128.921,108.981)
OP2: (25.874,129.205,111.157)
C3': (28.416,127.493,107.175)
C1': (30.330,128.574,107.877)
C5': (27.050,129.646,107.522)
O6: (35.065,131.081,110.507)
O4': (29.458,129.595,107.472)
C8: (31.204,129.262,110.171)
C2: (34.220,130.188,107.174)
C6: (34.384,130.632,109.576)
C5: (33.101,130.048,109.626)
C4: (32.527,129.612,108.456)
P: (25.629,129.582,109.730)
C4': (28.263,128.990,106.919)
C2': (29.402,127.465,108.332)
O2': (30.116,126.255,108.425)
N1: (34.876,130.665,108.277)
N2: (34.865,130.281,106.006)
N3: (33.023,129.650,107.209)
N7: (32.258,129.819,110.702)
N9: (31.305,129.119,108.810)
O5': (26.978,129.351,108.919)
O3': (29.098,126.957,106.059)
OP2: (25.874,129.205,111.157)
C3': (28.416,127.493,107.175)
C1': (30.330,128.574,107.877)
C5': (27.050,129.646,107.522)
O6: (35.065,131.081,110.507)
O4': (29.458,129.595,107.472)
C8: (31.204,129.262,110.171)
C2: (34.220,130.188,107.174)
C6: (34.384,130.632,109.576)
C5: (33.101,130.048,109.626)
C4: (32.527,129.612,108.456)
P: (25.629,129.582,109.730)
C4': (28.263,128.990,106.919)
C2': (29.402,127.465,108.332)
O2': (30.116,126.255,108.425)
N1: (34.876,130.665,108.277)
N2: (34.865,130.281,106.006)
N3: (33.023,129.650,107.209)
N7: (32.258,129.819,110.702)
N9: (31.305,129.119,108.810)
O5': (26.978,129.351,108.919)
O3': (29.098,126.957,106.059)
Image (generated by PyMOL):