Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:920:92
Extra
PDB:
ATOM 1 O3' G A 19 57.980 11.349 117.212 1.00113.73 O
ATOM 2 P G A 20 58.705 10.412 116.117 1.00116.46 P
ATOM 3 OP1 G A 20 58.139 9.041 116.230 1.00116.52 O
ATOM 4 OP2 G A 20 60.174 10.608 116.233 1.00117.01 O
ATOM 5 O5' G A 20 58.232 11.012 114.720 1.00117.49 O
ATOM 6 C5' G A 20 56.979 10.622 114.128 1.00119.75 C
ATOM 7 C4' G A 20 57.101 10.629 112.626 1.00121.54 C
ATOM 8 O4' G A 20 57.285 11.992 112.158 1.00121.95 O
ATOM 9 C3' G A 20 58.314 9.878 112.103 1.00122.82 C
ATOM 10 O3' G A 20 58.039 8.483 112.004 1.00125.09 O
ATOM 11 C2' G A 20 58.556 10.552 110.757 1.00122.57 C
ATOM 12 O2' G A 20 57.681 10.084 109.747 1.00121.68 O
ATOM 13 C1' G A 20 58.220 12.010 111.090 1.00122.10 C
ATOM 14 N9 G A 20 59.371 12.806 111.517 1.00122.03 N
ATOM 15 C8 G A 20 59.863 12.926 112.796 1.00121.80 C
ATOM 16 N7 G A 20 60.894 13.723 112.878 1.00121.51 N
ATOM 17 C5 G A 20 61.101 14.152 111.574 1.00121.75 C
ATOM 18 C6 G A 20 62.082 15.034 111.039 1.00121.63 C
ATOM 19 O6 G A 20 62.994 15.629 111.632 1.00121.95 O
ATOM 20 N1 G A 20 61.928 15.195 109.667 1.00121.21 N
ATOM 21 C2 G A 20 60.961 14.588 108.905 1.00121.36 C
ATOM 22 N2 G A 20 60.976 14.872 107.595 1.00121.83 N
ATOM 23 N3 G A 20 60.045 13.765 109.389 1.00121.55 N
ATOM 24 C4 G A 20 60.172 13.594 110.720 1.00121.75 C
ATOM 25 P G A 21 59.241 7.436 111.781 1.00126.09 P
ATOM 26 OP1 G A 21 59.129 6.443 112.880 1.00125.43 O
ATOM 27 OP2 G A 21 60.513 8.184 111.597 1.00126.10 O
ATOM 28 O5' G A 21 58.851 6.728 110.402 1.00127.03 O
TER
ATOM 1 O3' U B 1 54.370 11.972 102.620 1.00143.14 O
ATOM 2 P A B 2 54.833 13.352 101.928 1.00137.21 P
ATOM 3 OP1 A B 2 53.621 14.004 101.374 1.00137.07 O
ATOM 4 OP2 A B 2 55.979 13.053 101.035 1.00136.96 O
ATOM 5 O5' A B 2 55.371 14.225 103.146 1.00131.08 O
ATOM 6 C5' A B 2 55.118 15.639 103.228 1.00121.98 C
ATOM 7 C4' A B 2 56.416 16.383 103.419 1.00116.17 C
ATOM 8 O4' A B 2 57.190 15.700 104.440 1.00114.88 O
ATOM 9 C3' A B 2 57.326 16.433 102.199 1.00112.69 C
ATOM 10 O3' A B 2 58.177 17.575 102.249 1.00106.42 O
ATOM 11 C2' A B 2 58.112 15.132 102.323 1.00113.56 C
ATOM 12 O2' A B 2 59.393 15.173 101.728 1.00114.62 O
ATOM 13 C1' A B 2 58.225 14.947 103.837 1.00114.35 C
ATOM 14 N9 A B 2 58.025 13.539 104.182 1.00114.65 N
ATOM 15 C8 A B 2 57.728 12.521 103.306 1.00114.75 C
ATOM 16 N7 A B 2 57.606 11.347 103.876 1.00114.42 N
ATOM 17 C5 A B 2 57.838 11.605 105.219 1.00114.45 C
ATOM 18 C6 A B 2 57.859 10.769 106.346 1.00114.13 C
ATOM 19 N6 A B 2 57.641 9.453 106.294 1.00114.07 N
ATOM 20 N1 A B 2 58.120 11.338 107.542 1.00114.09 N
ATOM 21 C2 A B 2 58.348 12.658 107.589 1.00114.44 C
ATOM 22 N3 A B 2 58.361 13.550 106.597 1.00114.48 N
ATOM 23 C4 A B 2 58.096 12.953 105.424 1.00114.66 C
ATOM 24 P G B 3 58.014 18.755 101.161 1.00102.02 P
ATOM 25 OP1 G B 3 59.274 19.533 101.222 1.00103.11 O
ATOM 26 OP2 G B 3 56.713 19.440 101.389 1.00101.80 O
ATOM 27 O5' G B 3 57.986 18.043 99.733 1.00 96.79 O
TER
ATOM 2 P G A 20 58.705 10.412 116.117 1.00116.46 P
ATOM 3 OP1 G A 20 58.139 9.041 116.230 1.00116.52 O
ATOM 4 OP2 G A 20 60.174 10.608 116.233 1.00117.01 O
ATOM 5 O5' G A 20 58.232 11.012 114.720 1.00117.49 O
ATOM 6 C5' G A 20 56.979 10.622 114.128 1.00119.75 C
ATOM 7 C4' G A 20 57.101 10.629 112.626 1.00121.54 C
ATOM 8 O4' G A 20 57.285 11.992 112.158 1.00121.95 O
ATOM 9 C3' G A 20 58.314 9.878 112.103 1.00122.82 C
ATOM 10 O3' G A 20 58.039 8.483 112.004 1.00125.09 O
ATOM 11 C2' G A 20 58.556 10.552 110.757 1.00122.57 C
ATOM 12 O2' G A 20 57.681 10.084 109.747 1.00121.68 O
ATOM 13 C1' G A 20 58.220 12.010 111.090 1.00122.10 C
ATOM 14 N9 G A 20 59.371 12.806 111.517 1.00122.03 N
ATOM 15 C8 G A 20 59.863 12.926 112.796 1.00121.80 C
ATOM 16 N7 G A 20 60.894 13.723 112.878 1.00121.51 N
ATOM 17 C5 G A 20 61.101 14.152 111.574 1.00121.75 C
ATOM 18 C6 G A 20 62.082 15.034 111.039 1.00121.63 C
ATOM 19 O6 G A 20 62.994 15.629 111.632 1.00121.95 O
ATOM 20 N1 G A 20 61.928 15.195 109.667 1.00121.21 N
ATOM 21 C2 G A 20 60.961 14.588 108.905 1.00121.36 C
ATOM 22 N2 G A 20 60.976 14.872 107.595 1.00121.83 N
ATOM 23 N3 G A 20 60.045 13.765 109.389 1.00121.55 N
ATOM 24 C4 G A 20 60.172 13.594 110.720 1.00121.75 C
ATOM 25 P G A 21 59.241 7.436 111.781 1.00126.09 P
ATOM 26 OP1 G A 21 59.129 6.443 112.880 1.00125.43 O
ATOM 27 OP2 G A 21 60.513 8.184 111.597 1.00126.10 O
ATOM 28 O5' G A 21 58.851 6.728 110.402 1.00127.03 O
TER
ATOM 1 O3' U B 1 54.370 11.972 102.620 1.00143.14 O
ATOM 2 P A B 2 54.833 13.352 101.928 1.00137.21 P
ATOM 3 OP1 A B 2 53.621 14.004 101.374 1.00137.07 O
ATOM 4 OP2 A B 2 55.979 13.053 101.035 1.00136.96 O
ATOM 5 O5' A B 2 55.371 14.225 103.146 1.00131.08 O
ATOM 6 C5' A B 2 55.118 15.639 103.228 1.00121.98 C
ATOM 7 C4' A B 2 56.416 16.383 103.419 1.00116.17 C
ATOM 8 O4' A B 2 57.190 15.700 104.440 1.00114.88 O
ATOM 9 C3' A B 2 57.326 16.433 102.199 1.00112.69 C
ATOM 10 O3' A B 2 58.177 17.575 102.249 1.00106.42 O
ATOM 11 C2' A B 2 58.112 15.132 102.323 1.00113.56 C
ATOM 12 O2' A B 2 59.393 15.173 101.728 1.00114.62 O
ATOM 13 C1' A B 2 58.225 14.947 103.837 1.00114.35 C
ATOM 14 N9 A B 2 58.025 13.539 104.182 1.00114.65 N
ATOM 15 C8 A B 2 57.728 12.521 103.306 1.00114.75 C
ATOM 16 N7 A B 2 57.606 11.347 103.876 1.00114.42 N
ATOM 17 C5 A B 2 57.838 11.605 105.219 1.00114.45 C
ATOM 18 C6 A B 2 57.859 10.769 106.346 1.00114.13 C
ATOM 19 N6 A B 2 57.641 9.453 106.294 1.00114.07 N
ATOM 20 N1 A B 2 58.120 11.338 107.542 1.00114.09 N
ATOM 21 C2 A B 2 58.348 12.658 107.589 1.00114.44 C
ATOM 22 N3 A B 2 58.361 13.550 106.597 1.00114.48 N
ATOM 23 C4 A B 2 58.096 12.953 105.424 1.00114.66 C
ATOM 24 P G B 3 58.014 18.755 101.161 1.00102.02 P
ATOM 25 OP1 G B 3 59.274 19.533 101.222 1.00103.11 O
ATOM 26 OP2 G B 3 56.713 19.440 101.389 1.00101.80 O
ATOM 27 O5' G B 3 57.986 18.043 99.733 1.00 96.79 O
TER
Atoms:
OP1: (58.139,9.041,116.230)
OP2: (60.174,10.608,116.233)
C3': (58.314,9.878,112.103)
C1': (58.220,12.010,111.090)
C5': (56.979,10.622,114.128)
O6: (62.994,15.629,111.632)
O4': (57.285,11.992,112.158)
C8: (59.863,12.926,112.796)
C2: (60.961,14.588,108.905)
C6: (62.082,15.034,111.039)
C5: (61.101,14.152,111.574)
C4: (60.172,13.594,110.720)
P: (58.705,10.412,116.117)
C4': (57.101,10.629,112.626)
C2': (58.556,10.552,110.757)
O2': (57.681,10.084,109.747)
N1: (61.928,15.195,109.667)
N2: (60.976,14.872,107.595)
N3: (60.045,13.765,109.389)
N7: (60.894,13.723,112.878)
N9: (59.371,12.806,111.517)
O5': (58.232,11.012,114.720)
O3': (58.039,8.483,112.004)
OP2: (60.174,10.608,116.233)
C3': (58.314,9.878,112.103)
C1': (58.220,12.010,111.090)
C5': (56.979,10.622,114.128)
O6: (62.994,15.629,111.632)
O4': (57.285,11.992,112.158)
C8: (59.863,12.926,112.796)
C2: (60.961,14.588,108.905)
C6: (62.082,15.034,111.039)
C5: (61.101,14.152,111.574)
C4: (60.172,13.594,110.720)
P: (58.705,10.412,116.117)
C4': (57.101,10.629,112.626)
C2': (58.556,10.552,110.757)
O2': (57.681,10.084,109.747)
N1: (61.928,15.195,109.667)
N2: (60.976,14.872,107.595)
N3: (60.045,13.765,109.389)
N7: (60.894,13.723,112.878)
N9: (59.371,12.806,111.517)
O5': (58.232,11.012,114.720)
O3': (58.039,8.483,112.004)
OP1: (53.621,14.004,101.374)
OP2: (55.979,13.053,101.035)
C3': (57.326,16.433,102.199)
C1': (58.225,14.947,103.837)
C5': (55.118,15.639,103.228)
O4': (57.190,15.700,104.440)
C8: (57.728,12.521,103.306)
O2': (59.393,15.173,101.728)
C6: (57.859,10.769,106.346)
C5: (57.838,11.605,105.219)
C4: (58.096,12.953,105.424)
P: (54.833,13.352,101.928)
C4': (56.416,16.383,103.419)
C2': (58.112,15.132,102.323)
C2: (58.348,12.658,107.589)
N1: (58.120,11.338,107.542)
N3: (58.361,13.550,106.597)
N6: (57.641,9.453,106.294)
N7: (57.606,11.347,103.876)
N9: (58.025,13.539,104.182)
O5': (55.371,14.225,103.146)
O3': (58.177,17.575,102.249)
OP2: (55.979,13.053,101.035)
C3': (57.326,16.433,102.199)
C1': (58.225,14.947,103.837)
C5': (55.118,15.639,103.228)
O4': (57.190,15.700,104.440)
C8: (57.728,12.521,103.306)
O2': (59.393,15.173,101.728)
C6: (57.859,10.769,106.346)
C5: (57.838,11.605,105.219)
C4: (58.096,12.953,105.424)
P: (54.833,13.352,101.928)
C4': (56.416,16.383,103.419)
C2': (58.112,15.132,102.323)
C2: (58.348,12.658,107.589)
N1: (58.120,11.338,107.542)
N3: (58.361,13.550,106.597)
N6: (57.641,9.453,106.294)
N7: (57.606,11.347,103.876)
N9: (58.025,13.539,104.182)
O5': (55.371,14.225,103.146)
O3': (58.177,17.575,102.249)
Image (generated by PyMOL):