Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B48:B49
Extra
PDB:
ATOM 1 O3' U A 47 -6.733 43.315 95.782 1.00 38.98 O
ATOM 2 P C A 48 -7.139 41.770 95.722 1.00 45.31 P
ATOM 3 OP1 C A 48 -8.612 41.788 95.560 1.00 47.48 O
ATOM 4 OP2 C A 48 -6.557 40.995 96.847 1.00 54.98 O
ATOM 5 O5' C A 48 -6.423 41.236 94.400 1.00 41.48 O
ATOM 6 C5' C A 48 -7.055 41.162 93.155 1.00 30.39 C
ATOM 7 C4' C A 48 -7.008 39.705 92.668 1.00 26.52 C
ATOM 8 O4' C A 48 -7.703 38.881 93.604 1.00 32.52 O
ATOM 9 C3' C A 48 -7.691 39.610 91.339 1.00 34.45 C
ATOM 10 O3' C A 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 11 C2' C A 48 -8.992 38.880 91.657 1.00 24.46 C
ATOM 12 O2' C A 48 -9.456 38.126 90.606 1.00 28.28 O
ATOM 13 C1' C A 48 -8.625 38.077 92.917 1.00 32.74 C
ATOM 14 N1 C A 48 -9.756 37.838 93.823 1.00 30.46 N
ATOM 15 C2 C A 48 -10.307 36.543 93.897 1.00 34.44 C
ATOM 16 O2 C A 48 -9.801 35.626 93.210 1.00 34.79 O
ATOM 17 N3 C A 48 -11.383 36.314 94.715 1.00 29.69 N
ATOM 18 C4 C A 48 -11.905 37.319 95.448 1.00 36.58 C
ATOM 19 N4 C A 48 -12.938 37.017 96.265 1.00 33.20 N
ATOM 20 C5 C A 48 -11.368 38.655 95.397 1.00 27.33 C
ATOM 21 C6 C A 48 -10.290 38.872 94.581 1.00 29.44 C
ATOM 22 P G A 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 23 OP1 G A 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 24 OP2 G A 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 25 O5' G A 49 -5.656 40.353 89.021 1.00 37.95 O
TER
ATOM 1 O3' C B 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 2 P G B 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 3 OP1 G B 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 4 OP2 G B 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 5 O5' G B 49 -5.656 40.353 89.021 1.00 37.95 O
ATOM 6 C5' G B 49 -4.405 40.402 89.743 1.00 39.39 C
ATOM 7 C4' G B 49 -3.519 41.516 89.184 1.00 36.11 C
ATOM 8 O4' G B 49 -3.090 41.164 87.835 1.00 36.16 O
ATOM 9 C3' G B 49 -4.343 42.787 88.975 1.00 32.37 C
ATOM 10 O3' G B 49 -4.424 43.504 90.177 1.00 31.36 O
ATOM 11 C2' G B 49 -3.563 43.479 87.859 1.00 38.49 C
ATOM 12 O2' G B 49 -2.375 44.022 88.280 1.00 39.57 O
ATOM 13 C1' G B 49 -3.133 42.300 87.003 1.00 29.19 C
ATOM 14 N9 G B 49 -4.088 42.068 85.935 1.00 36.50 N
ATOM 15 C8 G B 49 -4.811 40.930 85.716 1.00 27.87 C
ATOM 16 N7 G B 49 -5.520 41.001 84.614 1.00 42.49 N
ATOM 17 C5 G B 49 -5.272 42.269 84.112 1.00 31.03 C
ATOM 18 C6 G B 49 -5.750 42.907 82.949 1.00 29.08 C
ATOM 19 O6 G B 49 -6.564 42.494 82.076 1.00 35.67 O
ATOM 20 N1 G B 49 -5.208 44.177 82.812 1.00 32.42 N
ATOM 21 C2 G B 49 -4.345 44.760 83.675 1.00 27.06 C
ATOM 22 N2 G B 49 -3.935 46.006 83.330 1.00 37.32 N
ATOM 23 N3 G B 49 -3.914 44.197 84.763 1.00 36.89 N
ATOM 24 C4 G B 49 -4.402 42.940 84.912 1.00 22.26 C
ATOM 25 P C B 50 -5.802 44.276 90.623 1.00 36.63 P
ATOM 26 OP1 C B 50 -5.674 44.679 92.019 1.00 36.86 O
ATOM 27 OP2 C B 50 -6.893 43.352 90.234 1.00 35.39 O
ATOM 28 O5' C B 50 -5.807 45.601 89.763 1.00 36.64 O
TER
ATOM 2 P C A 48 -7.139 41.770 95.722 1.00 45.31 P
ATOM 3 OP1 C A 48 -8.612 41.788 95.560 1.00 47.48 O
ATOM 4 OP2 C A 48 -6.557 40.995 96.847 1.00 54.98 O
ATOM 5 O5' C A 48 -6.423 41.236 94.400 1.00 41.48 O
ATOM 6 C5' C A 48 -7.055 41.162 93.155 1.00 30.39 C
ATOM 7 C4' C A 48 -7.008 39.705 92.668 1.00 26.52 C
ATOM 8 O4' C A 48 -7.703 38.881 93.604 1.00 32.52 O
ATOM 9 C3' C A 48 -7.691 39.610 91.339 1.00 34.45 C
ATOM 10 O3' C A 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 11 C2' C A 48 -8.992 38.880 91.657 1.00 24.46 C
ATOM 12 O2' C A 48 -9.456 38.126 90.606 1.00 28.28 O
ATOM 13 C1' C A 48 -8.625 38.077 92.917 1.00 32.74 C
ATOM 14 N1 C A 48 -9.756 37.838 93.823 1.00 30.46 N
ATOM 15 C2 C A 48 -10.307 36.543 93.897 1.00 34.44 C
ATOM 16 O2 C A 48 -9.801 35.626 93.210 1.00 34.79 O
ATOM 17 N3 C A 48 -11.383 36.314 94.715 1.00 29.69 N
ATOM 18 C4 C A 48 -11.905 37.319 95.448 1.00 36.58 C
ATOM 19 N4 C A 48 -12.938 37.017 96.265 1.00 33.20 N
ATOM 20 C5 C A 48 -11.368 38.655 95.397 1.00 27.33 C
ATOM 21 C6 C A 48 -10.290 38.872 94.581 1.00 29.44 C
ATOM 22 P G A 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 23 OP1 G A 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 24 OP2 G A 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 25 O5' G A 49 -5.656 40.353 89.021 1.00 37.95 O
TER
ATOM 1 O3' C B 48 -6.820 38.764 90.539 1.00 26.94 O
ATOM 2 P G B 49 -6.601 39.047 89.023 1.00 33.53 P
ATOM 3 OP1 G B 49 -7.771 39.474 88.213 1.00 32.34 O
ATOM 4 OP2 G B 49 -5.785 37.905 88.548 1.00 35.35 O
ATOM 5 O5' G B 49 -5.656 40.353 89.021 1.00 37.95 O
ATOM 6 C5' G B 49 -4.405 40.402 89.743 1.00 39.39 C
ATOM 7 C4' G B 49 -3.519 41.516 89.184 1.00 36.11 C
ATOM 8 O4' G B 49 -3.090 41.164 87.835 1.00 36.16 O
ATOM 9 C3' G B 49 -4.343 42.787 88.975 1.00 32.37 C
ATOM 10 O3' G B 49 -4.424 43.504 90.177 1.00 31.36 O
ATOM 11 C2' G B 49 -3.563 43.479 87.859 1.00 38.49 C
ATOM 12 O2' G B 49 -2.375 44.022 88.280 1.00 39.57 O
ATOM 13 C1' G B 49 -3.133 42.300 87.003 1.00 29.19 C
ATOM 14 N9 G B 49 -4.088 42.068 85.935 1.00 36.50 N
ATOM 15 C8 G B 49 -4.811 40.930 85.716 1.00 27.87 C
ATOM 16 N7 G B 49 -5.520 41.001 84.614 1.00 42.49 N
ATOM 17 C5 G B 49 -5.272 42.269 84.112 1.00 31.03 C
ATOM 18 C6 G B 49 -5.750 42.907 82.949 1.00 29.08 C
ATOM 19 O6 G B 49 -6.564 42.494 82.076 1.00 35.67 O
ATOM 20 N1 G B 49 -5.208 44.177 82.812 1.00 32.42 N
ATOM 21 C2 G B 49 -4.345 44.760 83.675 1.00 27.06 C
ATOM 22 N2 G B 49 -3.935 46.006 83.330 1.00 37.32 N
ATOM 23 N3 G B 49 -3.914 44.197 84.763 1.00 36.89 N
ATOM 24 C4 G B 49 -4.402 42.940 84.912 1.00 22.26 C
ATOM 25 P C B 50 -5.802 44.276 90.623 1.00 36.63 P
ATOM 26 OP1 C B 50 -5.674 44.679 92.019 1.00 36.86 O
ATOM 27 OP2 C B 50 -6.893 43.352 90.234 1.00 35.39 O
ATOM 28 O5' C B 50 -5.807 45.601 89.763 1.00 36.64 O
TER
Atoms:
C2: (-10.307,36.543,93.897)
OP1: (-8.612,41.788,95.560)
OP2: (-6.557,40.995,96.847)
C4: (-11.905,37.319,95.448)
O5': (-6.423,41.236,94.400)
C3': (-7.691,39.610,91.339)
C1': (-8.625,38.077,92.917)
O4': (-7.703,38.881,93.604)
C5': (-7.055,41.162,93.155)
P: (-7.139,41.770,95.722)
O2: (-9.801,35.626,93.210)
C4': (-7.008,39.705,92.668)
C2': (-8.992,38.880,91.657)
O2': (-9.456,38.126,90.606)
N1: (-9.756,37.838,93.823)
N3: (-11.383,36.314,94.715)
N4: (-12.938,37.017,96.265)
C6: (-10.290,38.872,94.581)
C5: (-11.368,38.655,95.397)
O3': (-6.820,38.764,90.539)
OP1: (-8.612,41.788,95.560)
OP2: (-6.557,40.995,96.847)
C4: (-11.905,37.319,95.448)
O5': (-6.423,41.236,94.400)
C3': (-7.691,39.610,91.339)
C1': (-8.625,38.077,92.917)
O4': (-7.703,38.881,93.604)
C5': (-7.055,41.162,93.155)
P: (-7.139,41.770,95.722)
O2: (-9.801,35.626,93.210)
C4': (-7.008,39.705,92.668)
C2': (-8.992,38.880,91.657)
O2': (-9.456,38.126,90.606)
N1: (-9.756,37.838,93.823)
N3: (-11.383,36.314,94.715)
N4: (-12.938,37.017,96.265)
C6: (-10.290,38.872,94.581)
C5: (-11.368,38.655,95.397)
O3': (-6.820,38.764,90.539)
OP1: (-7.771,39.474,88.213)
OP2: (-5.785,37.905,88.548)
C3': (-4.343,42.787,88.975)
C1': (-3.133,42.300,87.003)
C5': (-4.405,40.402,89.743)
O6: (-6.564,42.494,82.076)
O4': (-3.090,41.164,87.835)
C8: (-4.811,40.930,85.716)
C2: (-4.345,44.760,83.675)
C6: (-5.750,42.907,82.949)
C5: (-5.272,42.269,84.112)
C4: (-4.402,42.940,84.912)
P: (-6.601,39.047,89.023)
C4': (-3.519,41.516,89.184)
C2': (-3.563,43.479,87.859)
O2': (-2.375,44.022,88.280)
N1: (-5.208,44.177,82.812)
N2: (-3.935,46.006,83.330)
N3: (-3.914,44.197,84.763)
N7: (-5.520,41.001,84.614)
N9: (-4.088,42.068,85.935)
O5': (-5.656,40.353,89.021)
O3': (-4.424,43.504,90.177)
OP2: (-5.785,37.905,88.548)
C3': (-4.343,42.787,88.975)
C1': (-3.133,42.300,87.003)
C5': (-4.405,40.402,89.743)
O6: (-6.564,42.494,82.076)
O4': (-3.090,41.164,87.835)
C8: (-4.811,40.930,85.716)
C2: (-4.345,44.760,83.675)
C6: (-5.750,42.907,82.949)
C5: (-5.272,42.269,84.112)
C4: (-4.402,42.940,84.912)
P: (-6.601,39.047,89.023)
C4': (-3.519,41.516,89.184)
C2': (-3.563,43.479,87.859)
O2': (-2.375,44.022,88.280)
N1: (-5.208,44.177,82.812)
N2: (-3.935,46.006,83.330)
N3: (-3.914,44.197,84.763)
N7: (-5.520,41.001,84.614)
N9: (-4.088,42.068,85.935)
O5': (-5.656,40.353,89.021)
O3': (-4.424,43.504,90.177)
Image (generated by PyMOL):