Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2S:G3:G4
Extra
PDB:
ATOM 1 O3' C A 2 -0.444 13.295 -13.481 1.00 20.48 O
ATOM 2 P U A 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 3 OP1 U A 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 4 OP2 U A 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 5 O5' U A 3 0.957 13.530 -11.331 1.00 22.48 O
ATOM 6 C5' U A 3 1.869 14.596 -11.562 1.00 21.71 C
ATOM 7 C4' U A 3 2.295 15.206 -10.247 1.00 20.33 C
ATOM 8 O4' U A 3 1.114 15.603 -9.506 1.00 18.76 O
ATOM 9 C3' U A 3 3.062 14.244 -9.350 1.00 20.64 C
ATOM 10 O3' U A 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 11 C2' U A 3 1.967 13.667 -8.473 1.00 20.52 C
ATOM 12 O2' U A 3 2.436 13.143 -7.248 1.00 20.94 O
ATOM 13 C1' U A 3 1.112 14.910 -8.269 1.00 20.89 C
ATOM 14 N1 U A 3 -0.309 14.650 -7.919 1.00 19.59 N
ATOM 15 C2 U A 3 -0.794 15.134 -6.719 1.00 20.80 C
ATOM 16 O2 U A 3 -0.104 15.749 -5.915 1.00 20.24 O
ATOM 17 N3 U A 3 -2.116 14.843 -6.499 1.00 20.37 N
ATOM 18 C4 U A 3 -2.963 14.140 -7.337 1.00 20.91 C
ATOM 19 O4 U A 3 -4.125 13.956 -7.006 1.00 21.72 O
ATOM 20 C5 U A 3 -2.379 13.670 -8.566 1.00 19.49 C
ATOM 21 C6 U A 3 -1.100 13.951 -8.805 1.00 19.34 C
ATOM 22 P G A 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 23 OP1 G A 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 24 OP2 G A 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 25 O5' G A 4 6.001 13.696 -8.931 1.00 23.76 O
TER
ATOM 1 O3' U B 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 2 P G B 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 3 OP1 G B 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 4 OP2 G B 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 5 O5' G B 4 6.001 13.696 -8.931 1.00 23.76 O
ATOM 6 C5' G B 4 7.409 13.476 -8.972 1.00 24.27 C
ATOM 7 C4' G B 4 7.654 11.988 -9.043 1.00 23.40 C
ATOM 8 O4' G B 4 7.283 11.387 -7.772 1.00 22.56 O
ATOM 9 C3' G B 4 6.839 11.285 -10.111 1.00 23.99 C
ATOM 10 O3' G B 4 7.706 10.447 -10.827 1.00 24.11 O
ATOM 11 C2' G B 4 5.776 10.531 -9.330 1.00 22.51 C
ATOM 12 O2' G B 4 5.337 9.319 -9.905 1.00 25.09 O
ATOM 13 C1' G B 4 6.496 10.236 -8.025 1.00 20.42 C
ATOM 14 N9 G B 4 5.622 10.028 -6.871 1.00 18.78 N
ATOM 15 C8 G B 4 4.253 10.185 -6.799 1.00 18.13 C
ATOM 16 N7 G B 4 3.749 9.942 -5.622 1.00 19.33 N
ATOM 17 C5 G B 4 4.864 9.575 -4.862 1.00 18.67 C
ATOM 18 C6 G B 4 4.940 9.186 -3.502 1.00 19.08 C
ATOM 19 O6 G B 4 3.987 9.115 -2.727 1.00 16.97 O
ATOM 20 N1 G B 4 6.252 8.895 -3.117 1.00 16.86 N
ATOM 21 C2 G B 4 7.373 8.951 -3.924 1.00 18.23 C
ATOM 22 N2 G B 4 8.571 8.629 -3.392 1.00 16.70 N
ATOM 23 N3 G B 4 7.297 9.300 -5.215 1.00 15.97 N
ATOM 24 C4 G B 4 6.028 9.601 -5.605 1.00 18.61 C
ATOM 25 P U B 5 8.447 10.954 -12.160 1.00 27.81 P
ATOM 26 OP1 U B 5 7.575 11.927 -12.869 1.00 26.76 O
ATOM 27 OP2 U B 5 8.744 9.638 -12.799 1.00 27.68 O
ATOM 28 O5' U B 5 9.757 11.713 -11.621 1.00 22.11 O
TER
ATOM 2 P U A 3 0.537 12.517 -12.498 1.00 23.50 P
ATOM 3 OP1 U A 3 1.783 12.176 -13.204 1.00 26.39 O
ATOM 4 OP2 U A 3 -0.306 11.477 -11.857 1.00 26.78 O
ATOM 5 O5' U A 3 0.957 13.530 -11.331 1.00 22.48 O
ATOM 6 C5' U A 3 1.869 14.596 -11.562 1.00 21.71 C
ATOM 7 C4' U A 3 2.295 15.206 -10.247 1.00 20.33 C
ATOM 8 O4' U A 3 1.114 15.603 -9.506 1.00 18.76 O
ATOM 9 C3' U A 3 3.062 14.244 -9.350 1.00 20.64 C
ATOM 10 O3' U A 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 11 C2' U A 3 1.967 13.667 -8.473 1.00 20.52 C
ATOM 12 O2' U A 3 2.436 13.143 -7.248 1.00 20.94 O
ATOM 13 C1' U A 3 1.112 14.910 -8.269 1.00 20.89 C
ATOM 14 N1 U A 3 -0.309 14.650 -7.919 1.00 19.59 N
ATOM 15 C2 U A 3 -0.794 15.134 -6.719 1.00 20.80 C
ATOM 16 O2 U A 3 -0.104 15.749 -5.915 1.00 20.24 O
ATOM 17 N3 U A 3 -2.116 14.843 -6.499 1.00 20.37 N
ATOM 18 C4 U A 3 -2.963 14.140 -7.337 1.00 20.91 C
ATOM 19 O4 U A 3 -4.125 13.956 -7.006 1.00 21.72 O
ATOM 20 C5 U A 3 -2.379 13.670 -8.566 1.00 19.49 C
ATOM 21 C6 U A 3 -1.100 13.951 -8.805 1.00 19.34 C
ATOM 22 P G A 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 23 OP1 G A 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 24 OP2 G A 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 25 O5' G A 4 6.001 13.696 -8.931 1.00 23.76 O
TER
ATOM 1 O3' U B 3 3.984 14.961 -8.594 1.00 21.67 O
ATOM 2 P G B 4 5.458 15.185 -9.138 1.00 23.87 P
ATOM 3 OP1 G B 4 6.211 16.057 -8.224 1.00 21.75 O
ATOM 4 OP2 G B 4 5.446 15.435 -10.604 1.00 20.69 O
ATOM 5 O5' G B 4 6.001 13.696 -8.931 1.00 23.76 O
ATOM 6 C5' G B 4 7.409 13.476 -8.972 1.00 24.27 C
ATOM 7 C4' G B 4 7.654 11.988 -9.043 1.00 23.40 C
ATOM 8 O4' G B 4 7.283 11.387 -7.772 1.00 22.56 O
ATOM 9 C3' G B 4 6.839 11.285 -10.111 1.00 23.99 C
ATOM 10 O3' G B 4 7.706 10.447 -10.827 1.00 24.11 O
ATOM 11 C2' G B 4 5.776 10.531 -9.330 1.00 22.51 C
ATOM 12 O2' G B 4 5.337 9.319 -9.905 1.00 25.09 O
ATOM 13 C1' G B 4 6.496 10.236 -8.025 1.00 20.42 C
ATOM 14 N9 G B 4 5.622 10.028 -6.871 1.00 18.78 N
ATOM 15 C8 G B 4 4.253 10.185 -6.799 1.00 18.13 C
ATOM 16 N7 G B 4 3.749 9.942 -5.622 1.00 19.33 N
ATOM 17 C5 G B 4 4.864 9.575 -4.862 1.00 18.67 C
ATOM 18 C6 G B 4 4.940 9.186 -3.502 1.00 19.08 C
ATOM 19 O6 G B 4 3.987 9.115 -2.727 1.00 16.97 O
ATOM 20 N1 G B 4 6.252 8.895 -3.117 1.00 16.86 N
ATOM 21 C2 G B 4 7.373 8.951 -3.924 1.00 18.23 C
ATOM 22 N2 G B 4 8.571 8.629 -3.392 1.00 16.70 N
ATOM 23 N3 G B 4 7.297 9.300 -5.215 1.00 15.97 N
ATOM 24 C4 G B 4 6.028 9.601 -5.605 1.00 18.61 C
ATOM 25 P U B 5 8.447 10.954 -12.160 1.00 27.81 P
ATOM 26 OP1 U B 5 7.575 11.927 -12.869 1.00 26.76 O
ATOM 27 OP2 U B 5 8.744 9.638 -12.799 1.00 27.68 O
ATOM 28 O5' U B 5 9.757 11.713 -11.621 1.00 22.11 O
TER
Atoms:
C4: (-2.963,14.140,-7.337)
N3: (-2.116,14.843,-6.499)
OP1: (1.783,12.176,-13.204)
OP2: (-0.306,11.477,-11.857)
C2: (-0.794,15.134,-6.719)
C1': (1.112,14.910,-8.269)
C3': (3.062,14.244,-9.350)
O5': (0.957,13.530,-11.331)
O4': (1.114,15.603,-9.506)
C5': (1.869,14.596,-11.562)
P: (0.537,12.517,-12.498)
C4': (2.295,15.206,-10.247)
C2': (1.967,13.667,-8.473)
O2': (2.436,13.143,-7.248)
N1: (-0.309,14.650,-7.919)
O4: (-4.125,13.956,-7.006)
O2: (-0.104,15.749,-5.915)
C6: (-1.100,13.951,-8.805)
C5: (-2.379,13.670,-8.566)
O3': (3.984,14.961,-8.594)
N3: (-2.116,14.843,-6.499)
OP1: (1.783,12.176,-13.204)
OP2: (-0.306,11.477,-11.857)
C2: (-0.794,15.134,-6.719)
C1': (1.112,14.910,-8.269)
C3': (3.062,14.244,-9.350)
O5': (0.957,13.530,-11.331)
O4': (1.114,15.603,-9.506)
C5': (1.869,14.596,-11.562)
P: (0.537,12.517,-12.498)
C4': (2.295,15.206,-10.247)
C2': (1.967,13.667,-8.473)
O2': (2.436,13.143,-7.248)
N1: (-0.309,14.650,-7.919)
O4: (-4.125,13.956,-7.006)
O2: (-0.104,15.749,-5.915)
C6: (-1.100,13.951,-8.805)
C5: (-2.379,13.670,-8.566)
O3': (3.984,14.961,-8.594)
OP1: (6.211,16.057,-8.224)
OP2: (5.446,15.435,-10.604)
C3': (6.839,11.285,-10.111)
C1': (6.496,10.236,-8.025)
C5': (7.409,13.476,-8.972)
O6: (3.987,9.115,-2.727)
O4': (7.283,11.387,-7.772)
C8: (4.253,10.185,-6.799)
C2: (7.373,8.951,-3.924)
C6: (4.940,9.186,-3.502)
C5: (4.864,9.575,-4.862)
C4: (6.028,9.601,-5.605)
P: (5.458,15.185,-9.138)
C4': (7.654,11.988,-9.043)
C2': (5.776,10.531,-9.330)
O2': (5.337,9.319,-9.905)
N1: (6.252,8.895,-3.117)
N2: (8.571,8.629,-3.392)
N3: (7.297,9.300,-5.215)
N7: (3.749,9.942,-5.622)
N9: (5.622,10.028,-6.871)
O5': (6.001,13.696,-8.931)
O3': (7.706,10.447,-10.827)
OP2: (5.446,15.435,-10.604)
C3': (6.839,11.285,-10.111)
C1': (6.496,10.236,-8.025)
C5': (7.409,13.476,-8.972)
O6: (3.987,9.115,-2.727)
O4': (7.283,11.387,-7.772)
C8: (4.253,10.185,-6.799)
C2: (7.373,8.951,-3.924)
C6: (4.940,9.186,-3.502)
C5: (4.864,9.575,-4.862)
C4: (6.028,9.601,-5.605)
P: (5.458,15.185,-9.138)
C4': (7.654,11.988,-9.043)
C2': (5.776,10.531,-9.330)
O2': (5.337,9.319,-9.905)
N1: (6.252,8.895,-3.117)
N2: (8.571,8.629,-3.392)
N3: (7.297,9.300,-5.215)
N7: (3.749,9.942,-5.622)
N9: (5.622,10.028,-6.871)
O5': (6.001,13.696,-8.931)
O3': (7.706,10.447,-10.827)
Image (generated by PyMOL):