Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2S:E3:E4
Extra
PDB:
ATOM 1 O3' C A 2 27.511 13.376 -13.563 1.00 14.63 O
ATOM 2 P U A 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 3 OP1 U A 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 4 OP2 U A 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 5 O5' U A 3 28.883 13.627 -11.356 1.00 15.64 O
ATOM 6 C5' U A 3 29.716 14.740 -11.568 1.00 15.80 C
ATOM 7 C4' U A 3 30.122 15.307 -10.229 1.00 15.34 C
ATOM 8 O4' U A 3 28.934 15.664 -9.489 1.00 13.63 O
ATOM 9 C3' U A 3 30.879 14.313 -9.360 1.00 15.19 C
ATOM 10 O3' U A 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 11 C2' U A 3 29.806 13.720 -8.474 1.00 15.77 C
ATOM 12 O2' U A 3 30.352 13.264 -7.263 1.00 15.39 O
ATOM 13 C1' U A 3 28.943 14.953 -8.267 1.00 16.50 C
ATOM 14 N1 U A 3 27.523 14.702 -7.931 1.00 16.35 N
ATOM 15 C2 U A 3 27.036 15.263 -6.775 1.00 17.20 C
ATOM 16 O2 U A 3 27.747 15.931 -6.031 1.00 17.32 O
ATOM 17 N3 U A 3 25.707 15.000 -6.557 1.00 17.30 N
ATOM 18 C4 U A 3 24.859 14.246 -7.361 1.00 17.55 C
ATOM 19 O4 U A 3 23.681 14.089 -7.038 1.00 19.25 O
ATOM 20 C5 U A 3 25.455 13.700 -8.549 1.00 17.30 C
ATOM 21 C6 U A 3 26.740 13.954 -8.783 1.00 16.30 C
ATOM 22 P G A 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 23 OP1 G A 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 24 OP2 G A 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 25 O5' G A 4 33.864 13.727 -8.921 1.00 17.62 O
TER
ATOM 1 O3' U B 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 2 P G B 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 3 OP1 G B 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 4 OP2 G B 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 5 O5' G B 4 33.864 13.727 -8.921 1.00 17.62 O
ATOM 6 C5' G B 4 35.284 13.568 -9.023 1.00 17.17 C
ATOM 7 C4' G B 4 35.617 12.095 -9.088 1.00 17.75 C
ATOM 8 O4' G B 4 35.249 11.480 -7.823 1.00 15.03 O
ATOM 9 C3' G B 4 34.870 11.316 -10.154 1.00 17.85 C
ATOM 10 O3' G B 4 35.814 10.521 -10.826 1.00 18.76 O
ATOM 11 C2' G B 4 33.823 10.524 -9.393 1.00 16.66 C
ATOM 12 O2' G B 4 33.468 9.269 -9.941 1.00 18.87 O
ATOM 13 C1' G B 4 34.517 10.294 -8.062 1.00 13.35 C
ATOM 14 N9 G B 4 33.639 10.079 -6.922 1.00 11.51 N
ATOM 15 C8 G B 4 32.269 10.225 -6.854 1.00 11.12 C
ATOM 16 N7 G B 4 31.747 9.983 -5.684 1.00 12.97 N
ATOM 17 C5 G B 4 32.866 9.661 -4.911 1.00 11.49 C
ATOM 18 C6 G B 4 32.934 9.293 -3.542 1.00 11.39 C
ATOM 19 O6 G B 4 31.984 9.229 -2.789 1.00 9.92 O
ATOM 20 N1 G B 4 34.233 9.025 -3.112 1.00 10.76 N
ATOM 21 C2 G B 4 35.340 9.094 -3.923 1.00 10.86 C
ATOM 22 N2 G B 4 36.532 8.809 -3.382 1.00 9.59 N
ATOM 23 N3 G B 4 35.292 9.428 -5.226 1.00 9.85 N
ATOM 24 C4 G B 4 34.028 9.697 -5.642 1.00 11.74 C
ATOM 25 P U B 5 36.484 11.027 -12.195 1.00 22.92 P
ATOM 26 OP1 U B 5 35.604 12.010 -12.882 1.00 22.83 O
ATOM 27 OP2 U B 5 36.762 9.719 -12.847 1.00 23.14 O
ATOM 28 O5' U B 5 37.798 11.788 -11.706 1.00 16.20 O
TER
ATOM 2 P U A 3 28.511 12.631 -12.560 1.00 15.66 P
ATOM 3 OP1 U A 3 29.727 12.376 -13.345 1.00 16.13 O
ATOM 4 OP2 U A 3 27.711 11.557 -11.932 1.00 20.06 O
ATOM 5 O5' U A 3 28.883 13.627 -11.356 1.00 15.64 O
ATOM 6 C5' U A 3 29.716 14.740 -11.568 1.00 15.80 C
ATOM 7 C4' U A 3 30.122 15.307 -10.229 1.00 15.34 C
ATOM 8 O4' U A 3 28.934 15.664 -9.489 1.00 13.63 O
ATOM 9 C3' U A 3 30.879 14.313 -9.360 1.00 15.19 C
ATOM 10 O3' U A 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 11 C2' U A 3 29.806 13.720 -8.474 1.00 15.77 C
ATOM 12 O2' U A 3 30.352 13.264 -7.263 1.00 15.39 O
ATOM 13 C1' U A 3 28.943 14.953 -8.267 1.00 16.50 C
ATOM 14 N1 U A 3 27.523 14.702 -7.931 1.00 16.35 N
ATOM 15 C2 U A 3 27.036 15.263 -6.775 1.00 17.20 C
ATOM 16 O2 U A 3 27.747 15.931 -6.031 1.00 17.32 O
ATOM 17 N3 U A 3 25.707 15.000 -6.557 1.00 17.30 N
ATOM 18 C4 U A 3 24.859 14.246 -7.361 1.00 17.55 C
ATOM 19 O4 U A 3 23.681 14.089 -7.038 1.00 19.25 O
ATOM 20 C5 U A 3 25.455 13.700 -8.549 1.00 17.30 C
ATOM 21 C6 U A 3 26.740 13.954 -8.783 1.00 16.30 C
ATOM 22 P G A 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 23 OP1 G A 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 24 OP2 G A 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 25 O5' G A 4 33.864 13.727 -8.921 1.00 17.62 O
TER
ATOM 1 O3' U B 3 31.825 14.993 -8.579 1.00 16.23 O
ATOM 2 P G B 4 33.297 15.204 -9.140 1.00 17.49 P
ATOM 3 OP1 G B 4 34.050 16.067 -8.226 1.00 18.54 O
ATOM 4 OP2 G B 4 33.318 15.488 -10.600 1.00 17.04 O
ATOM 5 O5' G B 4 33.864 13.727 -8.921 1.00 17.62 O
ATOM 6 C5' G B 4 35.284 13.568 -9.023 1.00 17.17 C
ATOM 7 C4' G B 4 35.617 12.095 -9.088 1.00 17.75 C
ATOM 8 O4' G B 4 35.249 11.480 -7.823 1.00 15.03 O
ATOM 9 C3' G B 4 34.870 11.316 -10.154 1.00 17.85 C
ATOM 10 O3' G B 4 35.814 10.521 -10.826 1.00 18.76 O
ATOM 11 C2' G B 4 33.823 10.524 -9.393 1.00 16.66 C
ATOM 12 O2' G B 4 33.468 9.269 -9.941 1.00 18.87 O
ATOM 13 C1' G B 4 34.517 10.294 -8.062 1.00 13.35 C
ATOM 14 N9 G B 4 33.639 10.079 -6.922 1.00 11.51 N
ATOM 15 C8 G B 4 32.269 10.225 -6.854 1.00 11.12 C
ATOM 16 N7 G B 4 31.747 9.983 -5.684 1.00 12.97 N
ATOM 17 C5 G B 4 32.866 9.661 -4.911 1.00 11.49 C
ATOM 18 C6 G B 4 32.934 9.293 -3.542 1.00 11.39 C
ATOM 19 O6 G B 4 31.984 9.229 -2.789 1.00 9.92 O
ATOM 20 N1 G B 4 34.233 9.025 -3.112 1.00 10.76 N
ATOM 21 C2 G B 4 35.340 9.094 -3.923 1.00 10.86 C
ATOM 22 N2 G B 4 36.532 8.809 -3.382 1.00 9.59 N
ATOM 23 N3 G B 4 35.292 9.428 -5.226 1.00 9.85 N
ATOM 24 C4 G B 4 34.028 9.697 -5.642 1.00 11.74 C
ATOM 25 P U B 5 36.484 11.027 -12.195 1.00 22.92 P
ATOM 26 OP1 U B 5 35.604 12.010 -12.882 1.00 22.83 O
ATOM 27 OP2 U B 5 36.762 9.719 -12.847 1.00 23.14 O
ATOM 28 O5' U B 5 37.798 11.788 -11.706 1.00 16.20 O
TER
Atoms:
C4: (24.859,14.246,-7.361)
N3: (25.707,15.000,-6.557)
OP1: (29.727,12.376,-13.345)
OP2: (27.711,11.557,-11.932)
C2: (27.036,15.263,-6.775)
C1': (28.943,14.953,-8.267)
C3': (30.879,14.313,-9.360)
O5': (28.883,13.627,-11.356)
O4': (28.934,15.664,-9.489)
C5': (29.716,14.740,-11.568)
P: (28.511,12.631,-12.560)
C4': (30.122,15.307,-10.229)
C2': (29.806,13.720,-8.474)
O2': (30.352,13.264,-7.263)
N1: (27.523,14.702,-7.931)
O4: (23.681,14.089,-7.038)
O2: (27.747,15.931,-6.031)
C6: (26.740,13.954,-8.783)
C5: (25.455,13.700,-8.549)
O3': (31.825,14.993,-8.579)
N3: (25.707,15.000,-6.557)
OP1: (29.727,12.376,-13.345)
OP2: (27.711,11.557,-11.932)
C2: (27.036,15.263,-6.775)
C1': (28.943,14.953,-8.267)
C3': (30.879,14.313,-9.360)
O5': (28.883,13.627,-11.356)
O4': (28.934,15.664,-9.489)
C5': (29.716,14.740,-11.568)
P: (28.511,12.631,-12.560)
C4': (30.122,15.307,-10.229)
C2': (29.806,13.720,-8.474)
O2': (30.352,13.264,-7.263)
N1: (27.523,14.702,-7.931)
O4: (23.681,14.089,-7.038)
O2: (27.747,15.931,-6.031)
C6: (26.740,13.954,-8.783)
C5: (25.455,13.700,-8.549)
O3': (31.825,14.993,-8.579)
OP1: (34.050,16.067,-8.226)
OP2: (33.318,15.488,-10.600)
C3': (34.870,11.316,-10.154)
C1': (34.517,10.294,-8.062)
C5': (35.284,13.568,-9.023)
O6: (31.984,9.229,-2.789)
O4': (35.249,11.480,-7.823)
C8: (32.269,10.225,-6.854)
C2: (35.340,9.094,-3.923)
C6: (32.934,9.293,-3.542)
C5: (32.866,9.661,-4.911)
C4: (34.028,9.697,-5.642)
P: (33.297,15.204,-9.140)
C4': (35.617,12.095,-9.088)
C2': (33.823,10.524,-9.393)
O2': (33.468,9.269,-9.941)
N1: (34.233,9.025,-3.112)
N2: (36.532,8.809,-3.382)
N3: (35.292,9.428,-5.226)
N7: (31.747,9.983,-5.684)
N9: (33.639,10.079,-6.922)
O5': (33.864,13.727,-8.921)
O3': (35.814,10.521,-10.826)
OP2: (33.318,15.488,-10.600)
C3': (34.870,11.316,-10.154)
C1': (34.517,10.294,-8.062)
C5': (35.284,13.568,-9.023)
O6: (31.984,9.229,-2.789)
O4': (35.249,11.480,-7.823)
C8: (32.269,10.225,-6.854)
C2: (35.340,9.094,-3.923)
C6: (32.934,9.293,-3.542)
C5: (32.866,9.661,-4.911)
C4: (34.028,9.697,-5.642)
P: (33.297,15.204,-9.140)
C4': (35.617,12.095,-9.088)
C2': (33.823,10.524,-9.393)
O2': (33.468,9.269,-9.941)
N1: (34.233,9.025,-3.112)
N2: (36.532,8.809,-3.382)
N3: (35.292,9.428,-5.226)
N7: (31.747,9.983,-5.684)
N9: (33.639,10.079,-6.922)
O5': (33.864,13.727,-8.921)
O3': (35.814,10.521,-10.826)
Image (generated by PyMOL):