ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QCU:A7:C7

Extra

PDB:
ATOM 1 O3' G A 6 -5.609 8.813 21.633 0.50 24.97 O
ATOM 2 P G A 7 -5.273 9.592 23.006 0.47 26.04 P
ATOM 3 OP1 G A 7 -4.681 8.562 23.907 0.47 30.37 O
ATOM 4 OP2 G A 7 -6.453 10.374 23.427 0.47 29.39 O
ATOM 5 O5' G A 7 -4.130 10.635 22.623 0.50 24.44 O
ATOM 6 C5' G A 7 -2.831 10.183 22.217 0.50 24.68 C
ATOM 7 C4' G A 7 -2.031 11.348 21.716 0.50 23.59 C
ATOM 8 O4' G A 7 -2.710 11.935 20.570 0.50 24.63 O
ATOM 9 C3' G A 7 -1.862 12.533 22.677 0.50 23.47 C
ATOM 10 O3' G A 7 -0.885 12.248 23.663 0.50 24.37 O
ATOM 11 C2' G A 7 -1.445 13.617 21.690 0.50 24.68 C
ATOM 12 O2' G A 7 -0.119 13.428 21.222 0.50 29.16 O
ATOM 13 C1' G A 7 -2.444 13.328 20.569 0.50 25.02 C
ATOM 14 N9 G A 7 -3.716 14.011 20.622 0.47 24.21 N
ATOM 15 C8 G A 7 -4.957 13.571 21.012 0.47 23.60 C
ATOM 16 N7 G A 7 -5.914 14.456 20.865 0.47 22.85 N
ATOM 17 C5 G A 7 -5.219 15.605 20.509 0.47 23.63 C
ATOM 18 C6 G A 7 -5.698 16.903 20.190 0.47 25.27 C
ATOM 19 O6 G A 7 -6.911 17.302 20.275 0.47 24.28 O
ATOM 20 N1 G A 7 -4.692 17.801 19.846 0.47 24.93 N
ATOM 21 C2 G A 7 -3.386 17.406 19.639 0.47 27.08 C
ATOM 22 N2 G A 7 -2.441 18.317 19.326 0.30 26.88 N
ATOM 23 N3 G A 7 -2.916 16.216 19.960 0.47 24.11 N
ATOM 24 C4 G A 7 -3.882 15.346 20.309 0.47 23.81 C
ATOM 25 P C A 8 -1.006 12.939 25.116 0.47 24.56 P
ATOM 26 OP1 C A 8 0.086 12.335 25.880 0.47 30.86 O
ATOM 27 OP2 C A 8 -2.417 12.927 25.546 0.47 27.87 O
ATOM 28 O5' C A 8 -0.660 14.470 24.846 0.50 21.86 O
TER

ATOM 1 O3' G B 6 -5.609 8.813 21.633 0.50 24.97 O
ATOM 2 P C B 7 -5.273 9.592 23.006 0.47 26.04 P
ATOM 3 OP1 C B 7 -4.681 8.562 23.907 0.47 30.37 O
ATOM 4 OP2 C B 7 -6.453 10.374 23.427 0.47 29.39 O
ATOM 5 O5' C B 7 -4.130 10.635 22.623 0.50 24.44 O
ATOM 6 C5' C B 7 -2.831 10.183 22.217 0.50 24.68 C
ATOM 7 C4' C B 7 -2.031 11.348 21.716 0.50 23.59 C
ATOM 8 O4' C B 7 -2.710 11.935 20.570 0.50 24.63 O
ATOM 9 C3' C B 7 -1.862 12.533 22.677 0.50 23.47 C
ATOM 10 O3' C B 7 -0.885 12.248 23.663 0.50 24.37 O
ATOM 11 C2' C B 7 -1.445 13.617 21.690 0.50 24.68 C
ATOM 12 O2' C B 7 -0.119 13.428 21.222 0.50 29.16 O
ATOM 13 C1' C B 7 -2.444 13.328 20.569 0.50 25.02 C
ATOM 14 N1 C B 7 -3.705 14.045 20.669 0.53 23.37 N
ATOM 15 C2 C B 7 -3.755 15.363 20.192 0.53 23.39 C
ATOM 16 O2 C B 7 -2.755 15.918 19.700 0.53 28.75 O
ATOM 17 N3 C B 7 -4.917 16.057 20.265 0.53 23.65 N
ATOM 18 C4 C B 7 -6.010 15.435 20.751 0.53 22.88 C
ATOM 19 N4 C B 7 -7.153 16.141 20.759 0.53 24.64 N
ATOM 20 C5 C B 7 -5.956 14.137 21.324 0.53 21.50 C
ATOM 21 C6 C B 7 -4.802 13.460 21.233 0.53 22.86 C
ATOM 22 P C B 8 -1.006 12.939 25.116 0.47 24.56 P
ATOM 23 OP1 C B 8 0.086 12.335 25.880 0.47 30.86 O
ATOM 24 OP2 C B 8 -2.417 12.927 25.546 0.47 27.87 O
ATOM 25 O5' C B 8 -0.660 14.470 24.846 0.50 21.86 O
TER

Atoms:
OP1: (-4.681,8.562,23.907)
OP2: (-6.453,10.374,23.427)
C3': (-1.862,12.533,22.677)
C1': (-2.444,13.328,20.569)
C5': (-2.831,10.183,22.217)
O6: (-6.911,17.302,20.275)
O4': (-2.710,11.935,20.570)
C8: (-4.957,13.571,21.012)
C2: (-3.386,17.406,19.639)
C6: (-5.698,16.903,20.190)
C5: (-5.219,15.605,20.509)
C4: (-3.882,15.346,20.309)
P: (-5.273,9.592,23.006)
C4': (-2.031,11.348,21.716)
C2': (-1.445,13.617,21.690)
O2': (-0.119,13.428,21.222)
N1: (-4.692,17.801,19.846)
N2: (-2.441,18.317,19.326)
N3: (-2.916,16.216,19.960)
N7: (-5.914,14.456,20.865)
N9: (-3.716,14.011,20.622)
O5': (-4.130,10.635,22.623)
O3': (-0.885,12.248,23.663)
C2: (-3.755,15.363,20.192)
OP1: (-4.681,8.562,23.907)
OP2: (-6.453,10.374,23.427)
C4: (-6.010,15.435,20.751)
O5': (-4.130,10.635,22.623)
C3': (-1.862,12.533,22.677)
C1': (-2.444,13.328,20.569)
O4': (-2.710,11.935,20.570)
C5': (-2.831,10.183,22.217)
P: (-5.273,9.592,23.006)
O2: (-2.755,15.918,19.700)
C4': (-2.031,11.348,21.716)
C2': (-1.445,13.617,21.690)
O2': (-0.119,13.428,21.222)
N1: (-3.705,14.045,20.669)
N3: (-4.917,16.057,20.265)
N4: (-7.153,16.141,20.759)
C6: (-4.802,13.460,21.233)
C5: (-5.956,14.137,21.324)
O3': (-0.885,12.248,23.663)
Image (generated by PyMOL):
PyMOL image
show in jmol