ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QCU:A8:C8

Extra

PDB:
ATOM 1 O3' G A 7 -0.885 12.248 23.663 0.50 24.37 O
ATOM 2 P G A 8 -1.006 12.939 25.116 0.47 24.56 P
ATOM 3 OP1 G A 8 0.086 12.335 25.880 0.47 30.86 O
ATOM 4 OP2 G A 8 -2.417 12.927 25.546 0.47 27.87 O
ATOM 5 O5' G A 8 -0.660 14.470 24.846 0.50 21.86 O
ATOM 6 C5' G A 8 0.680 14.859 24.477 0.50 21.57 C
ATOM 7 C4' G A 8 0.711 16.352 24.278 0.50 20.14 C
ATOM 8 O4' G A 8 -0.093 16.681 23.109 0.50 20.30 O
ATOM 9 C3' G A 8 0.081 17.222 25.363 0.50 20.34 C
ATOM 10 O3' G A 8 0.978 17.381 26.457 0.50 22.45 O
ATOM 11 C2' G A 8 -0.107 18.542 24.588 0.50 19.93 C
ATOM 12 O2' G A 8 1.112 19.225 24.395 0.50 22.10 O
ATOM 13 C1' G A 8 -0.656 17.973 23.278 0.50 20.05 C
ATOM 14 N9 G A 8 -2.120 17.918 23.237 0.47 17.88 N
ATOM 15 C8 G A 8 -2.909 16.829 23.497 0.47 18.66 C
ATOM 16 N7 G A 8 -4.196 17.019 23.411 0.47 17.65 N
ATOM 17 C5 G A 8 -4.279 18.362 23.010 0.47 16.94 C
ATOM 18 C6 G A 8 -5.390 19.210 22.823 0.47 17.91 C
ATOM 19 O6 G A 8 -6.643 18.933 22.831 0.47 17.41 O
ATOM 20 N1 G A 8 -5.065 20.524 22.501 0.47 19.14 N
ATOM 21 C2 G A 8 -3.765 20.975 22.460 0.47 18.69 C
ATOM 22 N2 G A 8 -3.640 22.281 22.153 0.30 20.62 N
ATOM 23 N3 G A 8 -2.703 20.218 22.694 0.47 18.84 N
ATOM 24 C4 G A 8 -3.018 18.933 22.962 0.47 18.40 C
ATOM 25 P C A 9 0.399 17.549 27.938 0.47 22.40 P
ATOM 26 OP1 C A 9 1.593 17.477 28.837 0.47 23.43 O
ATOM 27 OP2 C A 9 -0.707 16.592 28.178 0.47 24.48 O
ATOM 28 O5' C A 9 -0.310 18.987 28.002 0.50 21.92 O
TER

ATOM 1 O3' G B 7 -0.885 12.248 23.663 0.50 24.37 O
ATOM 2 P C B 8 -1.006 12.939 25.116 0.47 24.56 P
ATOM 3 OP1 C B 8 0.086 12.335 25.880 0.47 30.86 O
ATOM 4 OP2 C B 8 -2.417 12.927 25.546 0.47 27.87 O
ATOM 5 O5' C B 8 -0.660 14.470 24.846 0.50 21.86 O
ATOM 6 C5' C B 8 0.680 14.859 24.477 0.50 21.57 C
ATOM 7 C4' C B 8 0.711 16.352 24.278 0.50 20.14 C
ATOM 8 O4' C B 8 -0.093 16.681 23.109 0.50 20.30 O
ATOM 9 C3' C B 8 0.081 17.222 25.363 0.50 20.34 C
ATOM 10 O3' C B 8 0.978 17.381 26.457 0.50 22.45 O
ATOM 11 C2' C B 8 -0.107 18.542 24.588 0.50 19.93 C
ATOM 12 O2' C B 8 1.112 19.225 24.395 0.50 22.10 O
ATOM 13 C1' C B 8 -0.656 17.973 23.278 0.50 20.05 C
ATOM 14 N1 C B 8 -2.122 17.778 23.337 0.53 18.29 N
ATOM 15 C2 C B 8 -2.895 18.890 22.974 0.53 17.88 C
ATOM 16 O2 C B 8 -2.266 19.954 22.847 0.53 20.70 O
ATOM 17 N3 C B 8 -4.236 18.816 23.083 0.53 17.64 N
ATOM 18 C4 C B 8 -4.808 17.639 23.394 0.53 17.18 C
ATOM 19 N4 C B 8 -6.130 17.638 23.339 0.53 19.58 N
ATOM 20 C5 C B 8 -4.049 16.475 23.743 0.53 18.83 C
ATOM 21 C6 C B 8 -2.706 16.591 23.657 0.53 18.66 C
ATOM 22 P C B 9 0.399 17.549 27.938 0.47 22.40 P
ATOM 23 OP1 C B 9 1.593 17.477 28.837 0.47 23.43 O
ATOM 24 OP2 C B 9 -0.707 16.592 28.178 0.47 24.48 O
ATOM 25 O5' C B 9 -0.310 18.987 28.002 0.50 21.92 O
TER

Atoms:
OP1: (0.086,12.335,25.880)
OP2: (-2.417,12.927,25.546)
C3': (0.081,17.222,25.363)
C1': (-0.656,17.973,23.278)
C5': (0.680,14.859,24.477)
O6: (-6.643,18.933,22.831)
O4': (-0.093,16.681,23.109)
C8: (-2.909,16.829,23.497)
C2: (-3.765,20.975,22.460)
C6: (-5.390,19.210,22.823)
C5: (-4.279,18.362,23.010)
C4: (-3.018,18.933,22.962)
P: (-1.006,12.939,25.116)
C4': (0.711,16.352,24.278)
C2': (-0.107,18.542,24.588)
O2': (1.112,19.225,24.395)
N1: (-5.065,20.524,22.501)
N2: (-3.640,22.281,22.153)
N3: (-2.703,20.218,22.694)
N7: (-4.196,17.019,23.411)
N9: (-2.120,17.918,23.237)
O5': (-0.660,14.470,24.846)
O3': (0.978,17.381,26.457)
C2: (-2.895,18.890,22.974)
OP1: (0.086,12.335,25.880)
OP2: (-2.417,12.927,25.546)
C4: (-4.808,17.639,23.394)
O5': (-0.660,14.470,24.846)
C3': (0.081,17.222,25.363)
C1': (-0.656,17.973,23.278)
O4': (-0.093,16.681,23.109)
C5': (0.680,14.859,24.477)
P: (-1.006,12.939,25.116)
O2: (-2.266,19.954,22.847)
C4': (0.711,16.352,24.278)
C2': (-0.107,18.542,24.588)
O2': (1.112,19.225,24.395)
N1: (-2.122,17.778,23.337)
N3: (-4.236,18.816,23.083)
N4: (-6.130,17.638,23.339)
C6: (-2.706,16.591,23.657)
C5: (-4.049,16.475,23.743)
O3': (0.978,17.381,26.457)
Image (generated by PyMOL):
PyMOL image
show in jmol