Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01308:0437
Extra
PDB:
ATOM 1 O3' A A1307 23.837 104.727 50.486 1.00 37.78 O
ATOM 2 P G A1308 25.310 104.668 51.127 1.00 35.78 P
ATOM 3 OP1 G A1308 25.877 103.348 50.733 1.00 31.08 O
ATOM 4 OP2 G A1308 25.242 105.048 52.566 1.00 31.56 O
ATOM 5 O5' G A1308 26.092 105.807 50.334 1.00 35.66 O
ATOM 6 C5' G A1308 27.110 106.597 50.967 1.00 32.42 C
ATOM 7 C4' G A1308 27.473 107.762 50.088 1.00 30.60 C
ATOM 8 O4' G A1308 26.386 108.724 50.074 1.00 31.35 O
ATOM 9 C3' G A1308 28.652 108.589 50.550 1.00 31.24 C
ATOM 10 O3' G A1308 29.881 107.962 50.209 1.00 33.07 O
ATOM 11 C2' G A1308 28.430 109.884 49.787 1.00 30.29 C
ATOM 12 O2' G A1308 28.767 109.753 48.426 1.00 30.75 O
ATOM 13 C1' G A1308 26.914 110.030 49.903 1.00 29.42 C
ATOM 14 N9 G A1308 26.540 110.840 51.057 1.00 29.49 N
ATOM 15 C8 G A1308 25.827 110.445 52.161 1.00 29.47 C
ATOM 16 N7 G A1308 25.651 111.406 53.027 1.00 29.05 N
ATOM 17 C5 G A1308 26.281 112.501 52.457 1.00 28.81 C
ATOM 18 C6 G A1308 26.408 113.832 52.924 1.00 30.73 C
ATOM 19 O6 G A1308 25.972 114.329 53.965 1.00 32.48 O
ATOM 20 N1 G A1308 27.123 114.620 52.030 1.00 32.13 N
ATOM 21 C2 G A1308 27.643 114.189 50.837 1.00 31.25 C
ATOM 22 N2 G A1308 28.273 115.109 50.103 1.00 29.73 N
ATOM 23 N3 G A1308 27.539 112.950 50.394 1.00 31.89 N
ATOM 24 C4 G A1308 26.843 112.166 51.247 1.00 29.78 C
ATOM 25 P U A1309 31.104 108.004 51.248 1.00 33.17 P
ATOM 26 OP1 U A1309 32.194 107.181 50.671 1.00 31.75 O
ATOM 27 OP2 U A1309 30.587 107.688 52.601 1.00 33.47 O
ATOM 28 O5' U A1309 31.542 109.534 51.240 1.00 32.90 O
TER
ATOM 1 O3' G B 436 34.123 119.946 42.652 1.00 33.18 O
ATOM 2 P A B 437 33.437 118.492 42.607 1.00 31.01 P
ATOM 3 OP1 A B 437 34.526 117.489 42.479 1.00 27.83 O
ATOM 4 OP2 A B 437 32.357 118.537 41.589 1.00 31.42 O
ATOM 5 O5' A B 437 32.792 118.317 44.053 1.00 28.65 O
ATOM 6 C5' A B 437 31.645 119.094 44.454 1.00 32.46 C
ATOM 7 C4' A B 437 31.224 118.732 45.863 1.00 32.61 C
ATOM 8 O4' A B 437 30.793 117.357 45.908 1.00 33.14 O
ATOM 9 C3' A B 437 32.337 118.813 46.892 1.00 32.83 C
ATOM 10 O3' A B 437 32.392 120.158 47.368 1.00 32.35 O
ATOM 11 C2' A B 437 31.880 117.844 47.985 1.00 32.07 C
ATOM 12 O2' A B 437 31.055 118.434 48.966 1.00 33.06 O
ATOM 13 C1' A B 437 31.044 116.831 47.194 1.00 30.64 C
ATOM 14 N9 A B 437 31.581 115.485 47.035 1.00 27.19 N
ATOM 15 C8 A B 437 32.841 115.107 46.671 1.00 27.43 C
ATOM 16 N7 A B 437 32.995 113.813 46.567 1.00 25.37 N
ATOM 17 C5 A B 437 31.749 113.304 46.888 1.00 25.40 C
ATOM 18 C6 A B 437 31.248 111.994 46.933 1.00 25.33 C
ATOM 19 N6 A B 437 31.971 110.913 46.612 1.00 21.42 N
ATOM 20 N1 A B 437 29.959 111.830 47.308 1.00 25.51 N
ATOM 21 C2 A B 437 29.229 112.916 47.595 1.00 24.30 C
ATOM 22 N3 A B 437 29.583 114.196 47.565 1.00 25.54 N
ATOM 23 C4 A B 437 30.873 114.323 47.198 1.00 25.81 C
ATOM 24 P C B 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 25 OP1 C B 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 26 OP2 C B 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 27 O5' C B 438 34.391 121.302 48.327 1.00 35.42 O
TER
ATOM 2 P G A1308 25.310 104.668 51.127 1.00 35.78 P
ATOM 3 OP1 G A1308 25.877 103.348 50.733 1.00 31.08 O
ATOM 4 OP2 G A1308 25.242 105.048 52.566 1.00 31.56 O
ATOM 5 O5' G A1308 26.092 105.807 50.334 1.00 35.66 O
ATOM 6 C5' G A1308 27.110 106.597 50.967 1.00 32.42 C
ATOM 7 C4' G A1308 27.473 107.762 50.088 1.00 30.60 C
ATOM 8 O4' G A1308 26.386 108.724 50.074 1.00 31.35 O
ATOM 9 C3' G A1308 28.652 108.589 50.550 1.00 31.24 C
ATOM 10 O3' G A1308 29.881 107.962 50.209 1.00 33.07 O
ATOM 11 C2' G A1308 28.430 109.884 49.787 1.00 30.29 C
ATOM 12 O2' G A1308 28.767 109.753 48.426 1.00 30.75 O
ATOM 13 C1' G A1308 26.914 110.030 49.903 1.00 29.42 C
ATOM 14 N9 G A1308 26.540 110.840 51.057 1.00 29.49 N
ATOM 15 C8 G A1308 25.827 110.445 52.161 1.00 29.47 C
ATOM 16 N7 G A1308 25.651 111.406 53.027 1.00 29.05 N
ATOM 17 C5 G A1308 26.281 112.501 52.457 1.00 28.81 C
ATOM 18 C6 G A1308 26.408 113.832 52.924 1.00 30.73 C
ATOM 19 O6 G A1308 25.972 114.329 53.965 1.00 32.48 O
ATOM 20 N1 G A1308 27.123 114.620 52.030 1.00 32.13 N
ATOM 21 C2 G A1308 27.643 114.189 50.837 1.00 31.25 C
ATOM 22 N2 G A1308 28.273 115.109 50.103 1.00 29.73 N
ATOM 23 N3 G A1308 27.539 112.950 50.394 1.00 31.89 N
ATOM 24 C4 G A1308 26.843 112.166 51.247 1.00 29.78 C
ATOM 25 P U A1309 31.104 108.004 51.248 1.00 33.17 P
ATOM 26 OP1 U A1309 32.194 107.181 50.671 1.00 31.75 O
ATOM 27 OP2 U A1309 30.587 107.688 52.601 1.00 33.47 O
ATOM 28 O5' U A1309 31.542 109.534 51.240 1.00 32.90 O
TER
ATOM 1 O3' G B 436 34.123 119.946 42.652 1.00 33.18 O
ATOM 2 P A B 437 33.437 118.492 42.607 1.00 31.01 P
ATOM 3 OP1 A B 437 34.526 117.489 42.479 1.00 27.83 O
ATOM 4 OP2 A B 437 32.357 118.537 41.589 1.00 31.42 O
ATOM 5 O5' A B 437 32.792 118.317 44.053 1.00 28.65 O
ATOM 6 C5' A B 437 31.645 119.094 44.454 1.00 32.46 C
ATOM 7 C4' A B 437 31.224 118.732 45.863 1.00 32.61 C
ATOM 8 O4' A B 437 30.793 117.357 45.908 1.00 33.14 O
ATOM 9 C3' A B 437 32.337 118.813 46.892 1.00 32.83 C
ATOM 10 O3' A B 437 32.392 120.158 47.368 1.00 32.35 O
ATOM 11 C2' A B 437 31.880 117.844 47.985 1.00 32.07 C
ATOM 12 O2' A B 437 31.055 118.434 48.966 1.00 33.06 O
ATOM 13 C1' A B 437 31.044 116.831 47.194 1.00 30.64 C
ATOM 14 N9 A B 437 31.581 115.485 47.035 1.00 27.19 N
ATOM 15 C8 A B 437 32.841 115.107 46.671 1.00 27.43 C
ATOM 16 N7 A B 437 32.995 113.813 46.567 1.00 25.37 N
ATOM 17 C5 A B 437 31.749 113.304 46.888 1.00 25.40 C
ATOM 18 C6 A B 437 31.248 111.994 46.933 1.00 25.33 C
ATOM 19 N6 A B 437 31.971 110.913 46.612 1.00 21.42 N
ATOM 20 N1 A B 437 29.959 111.830 47.308 1.00 25.51 N
ATOM 21 C2 A B 437 29.229 112.916 47.595 1.00 24.30 C
ATOM 22 N3 A B 437 29.583 114.196 47.565 1.00 25.54 N
ATOM 23 C4 A B 437 30.873 114.323 47.198 1.00 25.81 C
ATOM 24 P C B 438 33.617 121.108 46.956 1.00 33.11 P
ATOM 25 OP1 C B 438 33.113 122.443 46.591 1.00 31.75 O
ATOM 26 OP2 C B 438 34.500 120.373 46.014 1.00 30.40 O
ATOM 27 O5' C B 438 34.391 121.302 48.327 1.00 35.42 O
TER
Atoms:
OP1: (25.877,103.348,50.733)
OP2: (25.242,105.048,52.566)
C3': (28.652,108.589,50.550)
C1': (26.914,110.030,49.903)
C5': (27.110,106.597,50.967)
O6: (25.972,114.329,53.965)
O4': (26.386,108.724,50.074)
C8: (25.827,110.445,52.161)
C2: (27.643,114.189,50.837)
C6: (26.408,113.832,52.924)
C5: (26.281,112.501,52.457)
C4: (26.843,112.166,51.247)
P: (25.310,104.668,51.127)
C4': (27.473,107.762,50.088)
C2': (28.430,109.884,49.787)
O2': (28.767,109.753,48.426)
N1: (27.123,114.620,52.030)
N2: (28.273,115.109,50.103)
N3: (27.539,112.950,50.394)
N7: (25.651,111.406,53.027)
N9: (26.540,110.840,51.057)
O5': (26.092,105.807,50.334)
O3': (29.881,107.962,50.209)
OP2: (25.242,105.048,52.566)
C3': (28.652,108.589,50.550)
C1': (26.914,110.030,49.903)
C5': (27.110,106.597,50.967)
O6: (25.972,114.329,53.965)
O4': (26.386,108.724,50.074)
C8: (25.827,110.445,52.161)
C2: (27.643,114.189,50.837)
C6: (26.408,113.832,52.924)
C5: (26.281,112.501,52.457)
C4: (26.843,112.166,51.247)
P: (25.310,104.668,51.127)
C4': (27.473,107.762,50.088)
C2': (28.430,109.884,49.787)
O2': (28.767,109.753,48.426)
N1: (27.123,114.620,52.030)
N2: (28.273,115.109,50.103)
N3: (27.539,112.950,50.394)
N7: (25.651,111.406,53.027)
N9: (26.540,110.840,51.057)
O5': (26.092,105.807,50.334)
O3': (29.881,107.962,50.209)
OP1: (34.526,117.489,42.479)
OP2: (32.357,118.537,41.589)
C3': (32.337,118.813,46.892)
C1': (31.044,116.831,47.194)
C5': (31.645,119.094,44.454)
O4': (30.793,117.357,45.908)
C8: (32.841,115.107,46.671)
O2': (31.055,118.434,48.966)
C6: (31.248,111.994,46.933)
C5: (31.749,113.304,46.888)
C4: (30.873,114.323,47.198)
P: (33.437,118.492,42.607)
C4': (31.224,118.732,45.863)
C2': (31.880,117.844,47.985)
C2: (29.229,112.916,47.595)
N1: (29.959,111.830,47.308)
N3: (29.583,114.196,47.565)
N6: (31.971,110.913,46.612)
N7: (32.995,113.813,46.567)
N9: (31.581,115.485,47.035)
O5': (32.792,118.317,44.053)
O3': (32.392,120.158,47.368)
OP2: (32.357,118.537,41.589)
C3': (32.337,118.813,46.892)
C1': (31.044,116.831,47.194)
C5': (31.645,119.094,44.454)
O4': (30.793,117.357,45.908)
C8: (32.841,115.107,46.671)
O2': (31.055,118.434,48.966)
C6: (31.248,111.994,46.933)
C5: (31.749,113.304,46.888)
C4: (30.873,114.323,47.198)
P: (33.437,118.492,42.607)
C4': (31.224,118.732,45.863)
C2': (31.880,117.844,47.985)
C2: (29.229,112.916,47.595)
N1: (29.959,111.830,47.308)
N3: (29.583,114.196,47.565)
N6: (31.971,110.913,46.612)
N7: (32.995,113.813,46.567)
N9: (31.581,115.485,47.035)
O5': (32.792,118.317,44.053)
O3': (32.392,120.158,47.368)
Image (generated by PyMOL):