Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A522:A523
Extra
PDB:
ATOM 1 O3' U A 521 22.512 135.533 113.464 1.00 36.83 O
ATOM 2 P C A 522 21.820 135.083 112.114 1.00 36.31 P
ATOM 3 OP1 C A 522 21.314 136.351 111.573 1.00 37.27 O
ATOM 4 OP2 C A 522 20.900 133.941 112.301 1.00 34.77 O
ATOM 5 O5' C A 522 23.042 134.640 111.204 1.00 38.38 O
ATOM 6 C5' C A 522 23.487 133.284 111.169 1.00 42.34 C
ATOM 7 C4' C A 522 24.907 133.241 110.699 1.00 43.71 C
ATOM 8 O4' C A 522 25.646 134.253 111.407 1.00 45.98 O
ATOM 9 C3' C A 522 25.659 131.961 110.987 1.00 43.61 C
ATOM 10 O3' C A 522 25.424 131.042 109.934 1.00 42.46 O
ATOM 11 C2' C A 522 27.107 132.426 110.976 1.00 44.65 C
ATOM 12 O2' C A 522 27.549 132.538 109.633 1.00 44.86 O
ATOM 13 C1' C A 522 26.974 133.816 111.605 1.00 45.69 C
ATOM 14 N1 C A 522 27.284 133.963 113.037 1.00 46.58 N
ATOM 15 C2 C A 522 28.304 134.843 113.392 1.00 47.55 C
ATOM 16 O2 C A 522 28.902 135.447 112.494 1.00 48.50 O
ATOM 17 N3 C A 522 28.613 135.023 114.694 1.00 47.68 N
ATOM 18 C4 C A 522 27.940 134.358 115.631 1.00 48.27 C
ATOM 19 N4 C A 522 28.289 134.568 116.899 1.00 48.77 N
ATOM 20 C5 C A 522 26.883 133.446 115.304 1.00 47.12 C
ATOM 21 C6 C A 522 26.594 133.278 114.003 1.00 46.78 C
ATOM 22 P G A 523 25.838 129.513 110.116 1.00 42.77 P
ATOM 23 OP1 G A 523 24.848 128.774 109.327 1.00 44.70 O
ATOM 24 OP2 G A 523 26.009 129.205 111.567 1.00 41.74 O
ATOM 25 O5' G A 523 27.207 129.416 109.322 1.00 41.18 O
TER
ATOM 1 O3' C B 522 25.424 131.042 109.934 1.00 42.46 O
ATOM 2 P G B 523 25.838 129.513 110.116 1.00 42.77 P
ATOM 3 OP1 G B 523 24.848 128.774 109.327 1.00 44.70 O
ATOM 4 OP2 G B 523 26.009 129.205 111.567 1.00 41.74 O
ATOM 5 O5' G B 523 27.207 129.416 109.322 1.00 41.18 O
ATOM 6 C5' G B 523 27.222 129.732 107.939 1.00 38.37 C
ATOM 7 C4' G B 523 28.395 129.093 107.271 1.00 37.52 C
ATOM 8 O4' G B 523 29.586 129.689 107.805 1.00 36.98 O
ATOM 9 C3' G B 523 28.568 127.591 107.451 1.00 36.92 C
ATOM 10 O3' G B 523 29.207 127.138 106.281 1.00 38.87 O
ATOM 11 C2' G B 523 29.606 127.508 108.554 1.00 36.32 C
ATOM 12 O2' G B 523 30.385 126.340 108.461 1.00 37.01 O
ATOM 13 C1' G B 523 30.479 128.674 108.145 1.00 35.80 C
ATOM 14 N9 G B 523 31.416 129.209 109.109 1.00 35.50 N
ATOM 15 C8 G B 523 31.292 129.320 110.465 1.00 36.29 C
ATOM 16 N7 G B 523 32.314 129.903 111.017 1.00 34.55 N
ATOM 17 C5 G B 523 33.148 130.186 109.953 1.00 34.31 C
ATOM 18 C6 G B 523 34.393 130.831 109.912 1.00 35.52 C
ATOM 19 O6 G B 523 35.029 131.337 110.840 1.00 35.48 O
ATOM 20 N1 G B 523 34.905 130.870 108.614 1.00 34.67 N
ATOM 21 C2 G B 523 34.280 130.366 107.504 1.00 33.53 C
ATOM 22 N2 G B 523 34.938 130.464 106.339 1.00 34.28 N
ATOM 23 N3 G B 523 33.104 129.799 107.536 1.00 32.95 N
ATOM 24 C4 G B 523 32.607 129.738 108.781 1.00 33.79 C
ATOM 25 P A B 524 28.461 126.122 105.317 1.00 41.35 P
ATOM 26 OP1 A B 524 27.185 126.762 104.933 1.00 40.89 O
ATOM 27 OP2 A B 524 28.459 124.788 105.939 1.00 41.21 O
ATOM 28 O5' A B 524 29.420 126.038 104.063 1.00 39.77 O
TER
ATOM 2 P C A 522 21.820 135.083 112.114 1.00 36.31 P
ATOM 3 OP1 C A 522 21.314 136.351 111.573 1.00 37.27 O
ATOM 4 OP2 C A 522 20.900 133.941 112.301 1.00 34.77 O
ATOM 5 O5' C A 522 23.042 134.640 111.204 1.00 38.38 O
ATOM 6 C5' C A 522 23.487 133.284 111.169 1.00 42.34 C
ATOM 7 C4' C A 522 24.907 133.241 110.699 1.00 43.71 C
ATOM 8 O4' C A 522 25.646 134.253 111.407 1.00 45.98 O
ATOM 9 C3' C A 522 25.659 131.961 110.987 1.00 43.61 C
ATOM 10 O3' C A 522 25.424 131.042 109.934 1.00 42.46 O
ATOM 11 C2' C A 522 27.107 132.426 110.976 1.00 44.65 C
ATOM 12 O2' C A 522 27.549 132.538 109.633 1.00 44.86 O
ATOM 13 C1' C A 522 26.974 133.816 111.605 1.00 45.69 C
ATOM 14 N1 C A 522 27.284 133.963 113.037 1.00 46.58 N
ATOM 15 C2 C A 522 28.304 134.843 113.392 1.00 47.55 C
ATOM 16 O2 C A 522 28.902 135.447 112.494 1.00 48.50 O
ATOM 17 N3 C A 522 28.613 135.023 114.694 1.00 47.68 N
ATOM 18 C4 C A 522 27.940 134.358 115.631 1.00 48.27 C
ATOM 19 N4 C A 522 28.289 134.568 116.899 1.00 48.77 N
ATOM 20 C5 C A 522 26.883 133.446 115.304 1.00 47.12 C
ATOM 21 C6 C A 522 26.594 133.278 114.003 1.00 46.78 C
ATOM 22 P G A 523 25.838 129.513 110.116 1.00 42.77 P
ATOM 23 OP1 G A 523 24.848 128.774 109.327 1.00 44.70 O
ATOM 24 OP2 G A 523 26.009 129.205 111.567 1.00 41.74 O
ATOM 25 O5' G A 523 27.207 129.416 109.322 1.00 41.18 O
TER
ATOM 1 O3' C B 522 25.424 131.042 109.934 1.00 42.46 O
ATOM 2 P G B 523 25.838 129.513 110.116 1.00 42.77 P
ATOM 3 OP1 G B 523 24.848 128.774 109.327 1.00 44.70 O
ATOM 4 OP2 G B 523 26.009 129.205 111.567 1.00 41.74 O
ATOM 5 O5' G B 523 27.207 129.416 109.322 1.00 41.18 O
ATOM 6 C5' G B 523 27.222 129.732 107.939 1.00 38.37 C
ATOM 7 C4' G B 523 28.395 129.093 107.271 1.00 37.52 C
ATOM 8 O4' G B 523 29.586 129.689 107.805 1.00 36.98 O
ATOM 9 C3' G B 523 28.568 127.591 107.451 1.00 36.92 C
ATOM 10 O3' G B 523 29.207 127.138 106.281 1.00 38.87 O
ATOM 11 C2' G B 523 29.606 127.508 108.554 1.00 36.32 C
ATOM 12 O2' G B 523 30.385 126.340 108.461 1.00 37.01 O
ATOM 13 C1' G B 523 30.479 128.674 108.145 1.00 35.80 C
ATOM 14 N9 G B 523 31.416 129.209 109.109 1.00 35.50 N
ATOM 15 C8 G B 523 31.292 129.320 110.465 1.00 36.29 C
ATOM 16 N7 G B 523 32.314 129.903 111.017 1.00 34.55 N
ATOM 17 C5 G B 523 33.148 130.186 109.953 1.00 34.31 C
ATOM 18 C6 G B 523 34.393 130.831 109.912 1.00 35.52 C
ATOM 19 O6 G B 523 35.029 131.337 110.840 1.00 35.48 O
ATOM 20 N1 G B 523 34.905 130.870 108.614 1.00 34.67 N
ATOM 21 C2 G B 523 34.280 130.366 107.504 1.00 33.53 C
ATOM 22 N2 G B 523 34.938 130.464 106.339 1.00 34.28 N
ATOM 23 N3 G B 523 33.104 129.799 107.536 1.00 32.95 N
ATOM 24 C4 G B 523 32.607 129.738 108.781 1.00 33.79 C
ATOM 25 P A B 524 28.461 126.122 105.317 1.00 41.35 P
ATOM 26 OP1 A B 524 27.185 126.762 104.933 1.00 40.89 O
ATOM 27 OP2 A B 524 28.459 124.788 105.939 1.00 41.21 O
ATOM 28 O5' A B 524 29.420 126.038 104.063 1.00 39.77 O
TER
Atoms:
C2: (28.304,134.843,113.392)
OP1: (21.314,136.351,111.573)
OP2: (20.900,133.941,112.301)
C4: (27.940,134.358,115.631)
O5': (23.042,134.640,111.204)
C3': (25.659,131.961,110.987)
C1': (26.974,133.816,111.605)
O4': (25.646,134.253,111.407)
C5': (23.487,133.284,111.169)
P: (21.820,135.083,112.114)
O2: (28.902,135.447,112.494)
C4': (24.907,133.241,110.699)
C2': (27.107,132.426,110.976)
O2': (27.549,132.538,109.633)
N1: (27.284,133.963,113.037)
N3: (28.613,135.023,114.694)
N4: (28.289,134.568,116.899)
C6: (26.594,133.278,114.003)
C5: (26.883,133.446,115.304)
O3': (25.424,131.042,109.934)
OP1: (21.314,136.351,111.573)
OP2: (20.900,133.941,112.301)
C4: (27.940,134.358,115.631)
O5': (23.042,134.640,111.204)
C3': (25.659,131.961,110.987)
C1': (26.974,133.816,111.605)
O4': (25.646,134.253,111.407)
C5': (23.487,133.284,111.169)
P: (21.820,135.083,112.114)
O2: (28.902,135.447,112.494)
C4': (24.907,133.241,110.699)
C2': (27.107,132.426,110.976)
O2': (27.549,132.538,109.633)
N1: (27.284,133.963,113.037)
N3: (28.613,135.023,114.694)
N4: (28.289,134.568,116.899)
C6: (26.594,133.278,114.003)
C5: (26.883,133.446,115.304)
O3': (25.424,131.042,109.934)
OP1: (24.848,128.774,109.327)
OP2: (26.009,129.205,111.567)
C3': (28.568,127.591,107.451)
C1': (30.479,128.674,108.145)
C5': (27.222,129.732,107.939)
O6: (35.029,131.337,110.840)
O4': (29.586,129.689,107.805)
C8: (31.292,129.320,110.465)
C2: (34.280,130.366,107.504)
C6: (34.393,130.831,109.912)
C5: (33.148,130.186,109.953)
C4: (32.607,129.738,108.781)
P: (25.838,129.513,110.116)
C4': (28.395,129.093,107.271)
C2': (29.606,127.508,108.554)
O2': (30.385,126.340,108.461)
N1: (34.905,130.870,108.614)
N2: (34.938,130.464,106.339)
N3: (33.104,129.799,107.536)
N7: (32.314,129.903,111.017)
N9: (31.416,129.209,109.109)
O5': (27.207,129.416,109.322)
O3': (29.207,127.138,106.281)
OP2: (26.009,129.205,111.567)
C3': (28.568,127.591,107.451)
C1': (30.479,128.674,108.145)
C5': (27.222,129.732,107.939)
O6: (35.029,131.337,110.840)
O4': (29.586,129.689,107.805)
C8: (31.292,129.320,110.465)
C2: (34.280,130.366,107.504)
C6: (34.393,130.831,109.912)
C5: (33.148,130.186,109.953)
C4: (32.607,129.738,108.781)
P: (25.838,129.513,110.116)
C4': (28.395,129.093,107.271)
C2': (29.606,127.508,108.554)
O2': (30.385,126.340,108.461)
N1: (34.905,130.870,108.614)
N2: (34.938,130.464,106.339)
N3: (33.104,129.799,107.536)
N7: (32.314,129.903,111.017)
N9: (31.416,129.209,109.109)
O5': (27.207,129.416,109.322)
O3': (29.207,127.138,106.281)
Image (generated by PyMOL):