ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A2399:A1078

Extra

PDB:
ATOM 1 O3' C A2398 96.201 -53.089 19.212 1.00 70.58 O
ATOM 2 P G A2399 95.362 -53.377 17.890 1.00 75.17 P
ATOM 3 OP1 G A2399 96.074 -52.694 16.777 1.00 73.86 O
ATOM 4 OP2 G A2399 93.956 -53.032 18.170 1.00 44.37 O
ATOM 5 O5' G A2399 95.490 -54.939 17.734 1.00 59.70 O
ATOM 6 C5' G A2399 95.564 -55.512 16.455 1.00 61.83 C
ATOM 7 C4' G A2399 96.297 -56.808 16.487 1.00 49.68 C
ATOM 8 O4' G A2399 96.370 -57.306 17.840 1.00 48.03 O
ATOM 9 C3' G A2399 95.647 -57.929 15.740 1.00 51.31 C
ATOM 10 O3' G A2399 95.838 -57.823 14.364 1.00 52.93 O
ATOM 11 C2' G A2399 96.305 -59.138 16.366 1.00 54.40 C
ATOM 12 O2' G A2399 97.657 -59.246 15.926 1.00 44.61 O
ATOM 13 C1' G A2399 96.299 -58.712 17.831 1.00 43.01 C
ATOM 14 N9 G A2399 95.051 -59.068 18.481 1.00 34.65 N
ATOM 15 C8 G A2399 94.226 -58.100 18.975 1.00 51.75 C
ATOM 16 N7 G A2399 93.132 -58.561 19.503 1.00 52.18 N
ATOM 17 C5 G A2399 93.252 -59.919 19.327 1.00 47.96 C
ATOM 18 C6 G A2399 92.335 -60.910 19.718 1.00 50.52 C
ATOM 19 O6 G A2399 91.231 -60.749 20.288 1.00 61.95 O
ATOM 20 N1 G A2399 92.823 -62.166 19.367 1.00 41.47 N
ATOM 21 C2 G A2399 94.007 -62.418 18.736 1.00 46.55 C
ATOM 22 N2 G A2399 94.220 -63.720 18.515 1.00 45.51 N
ATOM 23 N3 G A2399 94.885 -61.487 18.363 1.00 43.99 N
ATOM 24 C4 G A2399 94.436 -60.264 18.692 1.00 46.74 C
ATOM 25 P G A2400 94.600 -57.940 13.402 1.00 35.50 P
ATOM 26 OP1 G A2400 94.970 -57.270 12.152 1.00 62.64 O
ATOM 27 OP2 G A2400 93.405 -57.467 14.149 1.00 50.64 O
ATOM 28 O5' G A2400 94.512 -59.488 13.179 1.00 40.50 O
TER

ATOM 1 O3' A B1077 100.100 -68.724 16.330 1.00 73.79 O
ATOM 2 P A B1078 99.907 -70.189 15.728 1.00 78.88 P
ATOM 3 OP1 A B1078 100.339 -71.153 16.759 1.00 67.77 O
ATOM 4 OP2 A B1078 100.564 -70.209 14.389 1.00 84.58 O
ATOM 5 O5' A B1078 98.342 -70.251 15.568 1.00 68.40 O
ATOM 6 C5' A B1078 97.520 -70.329 16.707 1.00 53.69 C
ATOM 7 C4' A B1078 96.647 -69.111 16.859 1.00 52.03 C
ATOM 8 O4' A B1078 97.421 -67.906 16.798 1.00 47.73 O
ATOM 9 C3' A B1078 95.591 -68.867 15.806 1.00 48.01 C
ATOM 10 O3' A B1078 94.500 -69.765 15.906 1.00 51.30 O
ATOM 11 C2' A B1078 95.205 -67.415 16.094 1.00 48.17 C
ATOM 12 O2' A B1078 94.237 -67.354 17.139 1.00 44.40 O
ATOM 13 C1' A B1078 96.535 -66.834 16.615 1.00 44.77 C
ATOM 14 N9 A B1078 97.121 -65.853 15.693 1.00 39.18 N
ATOM 15 C8 A B1078 97.509 -65.984 14.404 1.00 49.89 C
ATOM 16 N7 A B1078 97.922 -64.872 13.857 1.00 39.89 N
ATOM 17 C5 A B1078 97.790 -63.952 14.853 1.00 32.60 C
ATOM 18 C6 A B1078 98.054 -62.605 14.895 1.00 30.90 C
ATOM 19 N6 A B1078 98.528 -61.901 13.902 1.00 40.70 N
ATOM 20 N1 A B1078 97.807 -61.972 16.022 1.00 40.96 N
ATOM 21 C2 A B1078 97.303 -62.662 17.051 1.00 45.69 C
ATOM 22 N3 A B1078 97.004 -63.948 17.132 1.00 44.26 N
ATOM 23 C4 A B1078 97.282 -64.535 15.975 1.00 38.62 C
ATOM 24 P U B1079 93.484 -69.931 14.687 1.00 40.52 P
ATOM 25 OP1 U B1079 94.285 -70.326 13.502 1.00 43.47 O
ATOM 26 OP2 U B1079 92.677 -68.694 14.635 1.00 47.74 O
ATOM 27 O5' U B1079 92.580 -71.137 15.140 1.00 38.35 O
TER

Atoms:
OP1: (96.074,-52.694,16.777)
OP2: (93.956,-53.032,18.170)
C3': (95.647,-57.929,15.740)
C1': (96.299,-58.712,17.831)
C5': (95.564,-55.512,16.455)
O6: (91.231,-60.749,20.288)
O4': (96.370,-57.306,17.840)
C8: (94.226,-58.100,18.975)
C2: (94.007,-62.418,18.736)
C6: (92.335,-60.910,19.718)
C5: (93.252,-59.919,19.327)
C4: (94.436,-60.264,18.692)
P: (95.362,-53.377,17.890)
C4': (96.297,-56.808,16.487)
C2': (96.305,-59.138,16.366)
O2': (97.657,-59.246,15.926)
N1: (92.823,-62.166,19.367)
N2: (94.220,-63.720,18.515)
N3: (94.885,-61.487,18.363)
N7: (93.132,-58.561,19.503)
N9: (95.051,-59.068,18.481)
O5': (95.490,-54.939,17.734)
O3': (95.838,-57.823,14.364)
OP1: (100.339,-71.153,16.759)
OP2: (100.564,-70.209,14.389)
C3': (95.591,-68.867,15.806)
C1': (96.535,-66.834,16.615)
C5': (97.520,-70.329,16.707)
O4': (97.421,-67.906,16.798)
C8: (97.509,-65.984,14.404)
O2': (94.237,-67.354,17.139)
C6: (98.054,-62.605,14.895)
C5: (97.790,-63.952,14.853)
C4: (97.282,-64.535,15.975)
P: (99.907,-70.189,15.728)
C4': (96.647,-69.111,16.859)
C2': (95.205,-67.415,16.094)
C2: (97.303,-62.662,17.051)
N1: (97.807,-61.972,16.022)
N3: (97.004,-63.948,17.132)
N6: (98.528,-61.901,13.902)
N7: (97.922,-64.872,13.857)
N9: (97.121,-65.853,15.693)
O5': (98.342,-70.251,15.568)
O3': (94.500,-69.765,15.906)
Image (generated by PyMOL):
PyMOL image
show in jmol