ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0611:0889

Extra

PDB:
ATOM 1 O3' G A 610 39.998 111.894 82.939 1.00 28.44 O
ATOM 2 P U A 611 40.715 110.550 83.455 1.00 30.04 P
ATOM 3 OP1 U A 611 40.666 109.579 82.345 1.00 31.58 O
ATOM 4 OP2 U A 611 40.193 110.157 84.784 1.00 31.05 O
ATOM 5 O5' U A 611 42.238 110.968 83.653 1.00 32.47 O
ATOM 6 C5' U A 611 43.014 111.478 82.561 1.00 29.67 C
ATOM 7 C4' U A 611 44.392 111.859 83.033 1.00 28.71 C
ATOM 8 O4' U A 611 44.315 112.926 84.017 1.00 28.12 O
ATOM 9 C3' U A 611 45.159 110.776 83.763 1.00 28.31 C
ATOM 10 O3' U A 611 45.714 109.845 82.858 1.00 30.13 O
ATOM 11 C2' U A 611 46.215 111.588 84.507 1.00 30.52 C
ATOM 12 O2' U A 611 47.293 112.018 83.697 1.00 31.19 O
ATOM 13 C1' U A 611 45.401 112.811 84.927 1.00 28.15 C
ATOM 14 N1 U A 611 44.870 112.691 86.294 1.00 32.79 N
ATOM 15 C2 U A 611 45.714 113.035 87.338 1.00 32.93 C
ATOM 16 O2 U A 611 46.869 113.383 87.169 1.00 34.21 O
ATOM 17 N3 U A 611 45.156 112.955 88.591 1.00 34.03 N
ATOM 18 C4 U A 611 43.876 112.577 88.909 1.00 33.48 C
ATOM 19 O4 U A 611 43.523 112.587 90.090 1.00 31.18 O
ATOM 20 C5 U A 611 43.065 112.199 87.783 1.00 33.14 C
ATOM 21 C6 U A 611 43.576 112.264 86.545 1.00 33.84 C
ATOM 22 P U A 612 46.156 108.398 83.383 1.00 30.23 P
ATOM 23 OP1 U A 612 46.714 107.711 82.206 1.00 29.23 O
ATOM 24 OP2 U A 612 45.023 107.800 84.122 1.00 30.99 O
ATOM 25 O5' U A 612 47.326 108.697 84.422 1.00 30.46 O
TER

ATOM 1 O3' G B 888 48.210 115.159 81.014 1.00 31.12 O
ATOM 2 P G B 889 46.886 114.236 80.933 1.00 30.01 P
ATOM 3 OP1 G B 889 45.995 114.717 82.011 1.00 29.90 O
ATOM 4 OP2 G B 889 47.238 112.806 80.868 1.00 29.94 O
ATOM 5 O5' G B 889 46.243 114.614 79.526 1.00 26.39 O
ATOM 6 C5' G B 889 45.780 115.945 79.267 1.00 25.68 C
ATOM 7 C4' G B 889 45.633 116.176 77.776 1.00 25.33 C
ATOM 8 O4' G B 889 46.880 115.865 77.089 1.00 24.11 O
ATOM 9 C3' G B 889 44.634 115.309 77.027 1.00 24.27 C
ATOM 10 O3' G B 889 43.288 115.721 77.210 1.00 27.43 O
ATOM 11 C2' G B 889 45.086 115.530 75.594 1.00 25.83 C
ATOM 12 O2' G B 889 44.756 116.849 75.195 1.00 23.65 O
ATOM 13 C1' G B 889 46.599 115.427 75.759 1.00 23.67 C
ATOM 14 N9 G B 889 47.097 114.060 75.593 1.00 23.89 N
ATOM 15 C8 G B 889 47.616 113.241 76.570 1.00 26.91 C
ATOM 16 N7 G B 889 47.989 112.074 76.120 1.00 26.09 N
ATOM 17 C5 G B 889 47.686 112.113 74.768 1.00 24.50 C
ATOM 18 C6 G B 889 47.839 111.118 73.764 1.00 26.73 C
ATOM 19 O6 G B 889 48.273 109.957 73.884 1.00 27.83 O
ATOM 20 N1 G B 889 47.423 111.580 72.517 1.00 25.40 N
ATOM 21 C2 G B 889 46.911 112.836 72.274 1.00 27.33 C
ATOM 22 N2 G B 889 46.579 113.114 71.009 1.00 26.32 N
ATOM 23 N3 G B 889 46.739 113.759 73.209 1.00 28.36 N
ATOM 24 C4 G B 889 47.147 113.335 74.422 1.00 24.75 C
ATOM 25 P U B 890 42.107 114.638 77.071 1.00 27.17 P
ATOM 26 OP1 U B 890 40.848 115.338 77.326 1.00 23.16 O
ATOM 27 OP2 U B 890 42.461 113.452 77.881 1.00 28.03 O
ATOM 28 O5' U B 890 42.183 114.179 75.545 1.00 26.76 O
TER

Atoms:
C4: (43.876,112.577,88.909)
N3: (45.156,112.955,88.591)
OP1: (40.666,109.579,82.345)
OP2: (40.193,110.157,84.784)
C2: (45.714,113.035,87.338)
C1': (45.401,112.811,84.927)
C3': (45.159,110.776,83.763)
O5': (42.238,110.968,83.653)
O4': (44.315,112.926,84.017)
C5': (43.014,111.478,82.561)
P: (40.715,110.550,83.455)
C4': (44.392,111.859,83.033)
C2': (46.215,111.588,84.507)
O2': (47.293,112.018,83.697)
N1: (44.870,112.691,86.294)
O4: (43.523,112.587,90.090)
O2: (46.869,113.383,87.169)
C6: (43.576,112.264,86.545)
C5: (43.065,112.199,87.783)
O3': (45.714,109.845,82.858)
OP1: (45.995,114.717,82.011)
OP2: (47.238,112.806,80.868)
C3': (44.634,115.309,77.027)
C1': (46.599,115.427,75.759)
C5': (45.780,115.945,79.267)
O6: (48.273,109.957,73.884)
O4': (46.880,115.865,77.089)
C8: (47.616,113.241,76.570)
C2: (46.911,112.836,72.274)
C6: (47.839,111.118,73.764)
C5: (47.686,112.113,74.768)
C4: (47.147,113.335,74.422)
P: (46.886,114.236,80.933)
C4': (45.633,116.176,77.776)
C2': (45.086,115.530,75.594)
O2': (44.756,116.849,75.195)
N1: (47.423,111.580,72.517)
N2: (46.579,113.114,71.009)
N3: (46.739,113.759,73.209)
N7: (47.989,112.074,76.120)
N9: (47.097,114.060,75.593)
O5': (46.243,114.614,79.526)
O3': (43.288,115.721,77.210)
Image (generated by PyMOL):
PyMOL image
show in jmol