Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0522:0523
Extra
PDB:
ATOM 1 O3' U A 521 22.445 134.770 113.162 1.00 37.10 O
ATOM 2 P C A 522 21.611 134.334 111.855 1.00 39.54 P
ATOM 3 OP1 C A 522 21.014 135.542 111.230 1.00 38.00 O
ATOM 4 OP2 C A 522 20.735 133.199 112.237 1.00 38.61 O
ATOM 5 O5' C A 522 22.727 133.801 110.856 1.00 38.91 O
ATOM 6 C5' C A 522 23.351 132.528 111.054 1.00 41.12 C
ATOM 7 C4' C A 522 24.755 132.556 110.510 1.00 42.44 C
ATOM 8 O4' C A 522 25.520 133.564 111.212 1.00 43.55 O
ATOM 9 C3' C A 522 25.534 131.268 110.698 1.00 43.52 C
ATOM 10 O3' C A 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 11 C2' C A 522 26.988 131.748 110.708 1.00 43.90 C
ATOM 12 O2' C A 522 27.551 131.948 109.425 1.00 44.06 O
ATOM 13 C1' C A 522 26.855 133.122 111.374 1.00 43.53 C
ATOM 14 N1 C A 522 27.195 133.225 112.803 1.00 44.33 N
ATOM 15 C2 C A 522 28.187 134.135 113.189 1.00 44.60 C
ATOM 16 O2 C A 522 28.800 134.761 112.312 1.00 44.61 O
ATOM 17 N3 C A 522 28.454 134.306 114.506 1.00 45.60 N
ATOM 18 C4 C A 522 27.784 133.598 115.420 1.00 46.00 C
ATOM 19 N4 C A 522 28.059 133.817 116.707 1.00 44.84 N
ATOM 20 C5 C A 522 26.798 132.635 115.052 1.00 45.27 C
ATOM 21 C6 C A 522 26.540 132.481 113.745 1.00 45.13 C
ATOM 22 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 23 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 24 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 25 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
TER
ATOM 1 O3' C B 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 2 P G B 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G B 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G B 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G B 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G B 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G B 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G B 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G B 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G B 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G B 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G B 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G B 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G B 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G B 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G B 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G B 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G B 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G B 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G B 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G B 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G B 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G B 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G B 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A B 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A B 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A B 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A B 524 29.215 125.318 103.858 1.00 39.57 O
TER
ATOM 2 P C A 522 21.611 134.334 111.855 1.00 39.54 P
ATOM 3 OP1 C A 522 21.014 135.542 111.230 1.00 38.00 O
ATOM 4 OP2 C A 522 20.735 133.199 112.237 1.00 38.61 O
ATOM 5 O5' C A 522 22.727 133.801 110.856 1.00 38.91 O
ATOM 6 C5' C A 522 23.351 132.528 111.054 1.00 41.12 C
ATOM 7 C4' C A 522 24.755 132.556 110.510 1.00 42.44 C
ATOM 8 O4' C A 522 25.520 133.564 111.212 1.00 43.55 O
ATOM 9 C3' C A 522 25.534 131.268 110.698 1.00 43.52 C
ATOM 10 O3' C A 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 11 C2' C A 522 26.988 131.748 110.708 1.00 43.90 C
ATOM 12 O2' C A 522 27.551 131.948 109.425 1.00 44.06 O
ATOM 13 C1' C A 522 26.855 133.122 111.374 1.00 43.53 C
ATOM 14 N1 C A 522 27.195 133.225 112.803 1.00 44.33 N
ATOM 15 C2 C A 522 28.187 134.135 113.189 1.00 44.60 C
ATOM 16 O2 C A 522 28.800 134.761 112.312 1.00 44.61 O
ATOM 17 N3 C A 522 28.454 134.306 114.506 1.00 45.60 N
ATOM 18 C4 C A 522 27.784 133.598 115.420 1.00 46.00 C
ATOM 19 N4 C A 522 28.059 133.817 116.707 1.00 44.84 N
ATOM 20 C5 C A 522 26.798 132.635 115.052 1.00 45.27 C
ATOM 21 C6 C A 522 26.540 132.481 113.745 1.00 45.13 C
ATOM 22 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 23 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 24 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 25 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
TER
ATOM 1 O3' C B 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 2 P G B 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G B 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G B 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G B 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G B 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G B 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G B 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G B 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G B 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G B 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G B 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G B 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G B 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G B 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G B 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G B 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G B 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G B 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G B 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G B 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G B 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G B 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G B 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A B 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A B 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A B 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A B 524 29.215 125.318 103.858 1.00 39.57 O
TER
Atoms:
C2: (28.187,134.135,113.189)
OP1: (21.014,135.542,111.230)
OP2: (20.735,133.199,112.237)
C4: (27.784,133.598,115.420)
O5': (22.727,133.801,110.856)
C3': (25.534,131.268,110.698)
C1': (26.855,133.122,111.374)
O4': (25.520,133.564,111.212)
C5': (23.351,132.528,111.054)
P: (21.611,134.334,111.855)
O2: (28.800,134.761,112.312)
C4': (24.755,132.556,110.510)
C2': (26.988,131.748,110.708)
O2': (27.551,131.948,109.425)
N1: (27.195,133.225,112.803)
N3: (28.454,134.306,114.506)
N4: (28.059,133.817,116.707)
C6: (26.540,132.481,113.745)
C5: (26.798,132.635,115.052)
O3': (25.209,130.392,109.616)
OP1: (21.014,135.542,111.230)
OP2: (20.735,133.199,112.237)
C4: (27.784,133.598,115.420)
O5': (22.727,133.801,110.856)
C3': (25.534,131.268,110.698)
C1': (26.855,133.122,111.374)
O4': (25.520,133.564,111.212)
C5': (23.351,132.528,111.054)
P: (21.611,134.334,111.855)
O2: (28.800,134.761,112.312)
C4': (24.755,132.556,110.510)
C2': (26.988,131.748,110.708)
O2': (27.551,131.948,109.425)
N1: (27.195,133.225,112.803)
N3: (28.454,134.306,114.506)
N4: (28.059,133.817,116.707)
C6: (26.540,132.481,113.745)
C5: (26.798,132.635,115.052)
O3': (25.209,130.392,109.616)
OP1: (24.360,128.149,108.961)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
Image (generated by PyMOL):