Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2014:A1038
Extra
PDB:
ATOM 1 O3' A A2013 45.266 116.639 118.113 1.00 26.11 O
ATOM 2 P G A2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 3 OP1 G A2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 4 OP2 G A2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 5 O5' G A2014 44.778 114.915 116.379 1.00 23.73 O
ATOM 6 C5' G A2014 44.079 113.913 117.135 1.00 22.05 C
ATOM 7 C4' G A2014 42.880 113.407 116.357 1.00 21.72 C
ATOM 8 O4' G A2014 42.018 114.532 116.045 1.00 21.26 O
ATOM 9 C3' G A2014 43.156 112.783 114.991 1.00 21.38 C
ATOM 10 O3' G A2014 43.514 111.405 115.078 1.00 23.62 O
ATOM 11 C2' G A2014 41.813 112.933 114.296 1.00 20.84 C
ATOM 12 O2' G A2014 40.895 111.954 114.723 1.00 19.36 O
ATOM 13 C1' G A2014 41.369 114.307 114.799 1.00 22.36 C
ATOM 14 N9 G A2014 41.798 115.328 113.852 1.00 23.26 N
ATOM 15 C8 G A2014 42.844 116.204 113.968 1.00 23.87 C
ATOM 16 N7 G A2014 43.016 116.933 112.903 1.00 24.48 N
ATOM 17 C5 G A2014 42.015 116.518 112.040 1.00 25.02 C
ATOM 18 C6 G A2014 41.703 116.941 110.721 1.00 24.70 C
ATOM 19 O6 G A2014 42.287 117.764 110.023 1.00 25.63 O
ATOM 20 N1 G A2014 40.588 116.288 110.221 1.00 23.50 N
ATOM 21 C2 G A2014 39.867 115.337 110.891 1.00 26.39 C
ATOM 22 N2 G A2014 38.807 114.827 110.242 1.00 26.57 N
ATOM 23 N3 G A2014 40.161 114.916 112.115 1.00 26.30 N
ATOM 24 C4 G A2014 41.241 115.550 112.623 1.00 24.76 C
ATOM 25 P U A2015 44.520 110.769 113.997 1.00 26.95 P
ATOM 26 OP1 U A2015 44.892 109.403 114.432 1.00 26.18 O
ATOM 27 OP2 U A2015 45.590 111.770 113.728 1.00 27.06 O
ATOM 28 O5' U A2015 43.642 110.638 112.676 1.00 25.77 O
TER
ATOM 1 O3' A B1037 31.377 109.229 111.169 1.00 28.96 O
ATOM 2 P A B1038 31.797 108.240 109.989 1.00 30.31 P
ATOM 3 OP1 A B1038 30.571 108.057 109.184 1.00 30.72 O
ATOM 4 OP2 A B1038 32.498 107.047 110.538 1.00 29.73 O
ATOM 5 O5' A B1038 32.841 109.112 109.160 1.00 29.29 O
ATOM 6 C5' A B1038 32.485 110.422 108.655 1.00 29.57 C
ATOM 7 C4' A B1038 33.724 111.247 108.431 1.00 29.41 C
ATOM 8 O4' A B1038 34.415 111.366 109.690 1.00 29.28 O
ATOM 9 C3' A B1038 34.744 110.629 107.486 1.00 29.85 C
ATOM 10 O3' A B1038 34.453 111.035 106.138 1.00 30.14 O
ATOM 11 C2' A B1038 36.067 111.233 107.967 1.00 29.37 C
ATOM 12 O2' A B1038 36.357 112.497 107.412 1.00 29.74 O
ATOM 13 C1' A B1038 35.800 111.465 109.455 1.00 28.76 C
ATOM 14 N9 A B1038 36.494 110.609 110.407 1.00 28.86 N
ATOM 15 C8 A B1038 36.474 109.242 110.496 1.00 29.52 C
ATOM 16 N7 A B1038 37.164 108.767 111.504 1.00 29.28 N
ATOM 17 C5 A B1038 37.685 109.900 112.110 1.00 27.28 C
ATOM 18 C6 A B1038 38.495 110.073 113.227 1.00 25.86 C
ATOM 19 N6 A B1038 38.943 109.061 113.968 1.00 27.46 N
ATOM 20 N1 A B1038 38.833 111.332 113.567 1.00 24.68 N
ATOM 21 C2 A B1038 38.381 112.341 112.825 1.00 26.01 C
ATOM 22 N3 A B1038 37.610 112.309 111.751 1.00 26.62 N
ATOM 23 C4 A B1038 37.292 111.041 111.440 1.00 27.98 C
ATOM 24 P C B1039 34.237 109.945 104.969 1.00 31.74 P
ATOM 25 OP1 C B1039 34.163 110.736 103.703 1.00 29.44 O
ATOM 26 OP2 C B1039 33.155 108.989 105.301 1.00 32.15 O
ATOM 27 O5' C B1039 35.566 109.084 104.986 1.00 32.16 O
TER
ATOM 2 P G A2014 45.985 115.734 117.014 1.00 26.19 P
ATOM 3 OP1 G A2014 46.842 114.796 117.752 1.00 24.45 O
ATOM 4 OP2 G A2014 46.582 116.585 115.937 1.00 24.09 O
ATOM 5 O5' G A2014 44.778 114.915 116.379 1.00 23.73 O
ATOM 6 C5' G A2014 44.079 113.913 117.135 1.00 22.05 C
ATOM 7 C4' G A2014 42.880 113.407 116.357 1.00 21.72 C
ATOM 8 O4' G A2014 42.018 114.532 116.045 1.00 21.26 O
ATOM 9 C3' G A2014 43.156 112.783 114.991 1.00 21.38 C
ATOM 10 O3' G A2014 43.514 111.405 115.078 1.00 23.62 O
ATOM 11 C2' G A2014 41.813 112.933 114.296 1.00 20.84 C
ATOM 12 O2' G A2014 40.895 111.954 114.723 1.00 19.36 O
ATOM 13 C1' G A2014 41.369 114.307 114.799 1.00 22.36 C
ATOM 14 N9 G A2014 41.798 115.328 113.852 1.00 23.26 N
ATOM 15 C8 G A2014 42.844 116.204 113.968 1.00 23.87 C
ATOM 16 N7 G A2014 43.016 116.933 112.903 1.00 24.48 N
ATOM 17 C5 G A2014 42.015 116.518 112.040 1.00 25.02 C
ATOM 18 C6 G A2014 41.703 116.941 110.721 1.00 24.70 C
ATOM 19 O6 G A2014 42.287 117.764 110.023 1.00 25.63 O
ATOM 20 N1 G A2014 40.588 116.288 110.221 1.00 23.50 N
ATOM 21 C2 G A2014 39.867 115.337 110.891 1.00 26.39 C
ATOM 22 N2 G A2014 38.807 114.827 110.242 1.00 26.57 N
ATOM 23 N3 G A2014 40.161 114.916 112.115 1.00 26.30 N
ATOM 24 C4 G A2014 41.241 115.550 112.623 1.00 24.76 C
ATOM 25 P U A2015 44.520 110.769 113.997 1.00 26.95 P
ATOM 26 OP1 U A2015 44.892 109.403 114.432 1.00 26.18 O
ATOM 27 OP2 U A2015 45.590 111.770 113.728 1.00 27.06 O
ATOM 28 O5' U A2015 43.642 110.638 112.676 1.00 25.77 O
TER
ATOM 1 O3' A B1037 31.377 109.229 111.169 1.00 28.96 O
ATOM 2 P A B1038 31.797 108.240 109.989 1.00 30.31 P
ATOM 3 OP1 A B1038 30.571 108.057 109.184 1.00 30.72 O
ATOM 4 OP2 A B1038 32.498 107.047 110.538 1.00 29.73 O
ATOM 5 O5' A B1038 32.841 109.112 109.160 1.00 29.29 O
ATOM 6 C5' A B1038 32.485 110.422 108.655 1.00 29.57 C
ATOM 7 C4' A B1038 33.724 111.247 108.431 1.00 29.41 C
ATOM 8 O4' A B1038 34.415 111.366 109.690 1.00 29.28 O
ATOM 9 C3' A B1038 34.744 110.629 107.486 1.00 29.85 C
ATOM 10 O3' A B1038 34.453 111.035 106.138 1.00 30.14 O
ATOM 11 C2' A B1038 36.067 111.233 107.967 1.00 29.37 C
ATOM 12 O2' A B1038 36.357 112.497 107.412 1.00 29.74 O
ATOM 13 C1' A B1038 35.800 111.465 109.455 1.00 28.76 C
ATOM 14 N9 A B1038 36.494 110.609 110.407 1.00 28.86 N
ATOM 15 C8 A B1038 36.474 109.242 110.496 1.00 29.52 C
ATOM 16 N7 A B1038 37.164 108.767 111.504 1.00 29.28 N
ATOM 17 C5 A B1038 37.685 109.900 112.110 1.00 27.28 C
ATOM 18 C6 A B1038 38.495 110.073 113.227 1.00 25.86 C
ATOM 19 N6 A B1038 38.943 109.061 113.968 1.00 27.46 N
ATOM 20 N1 A B1038 38.833 111.332 113.567 1.00 24.68 N
ATOM 21 C2 A B1038 38.381 112.341 112.825 1.00 26.01 C
ATOM 22 N3 A B1038 37.610 112.309 111.751 1.00 26.62 N
ATOM 23 C4 A B1038 37.292 111.041 111.440 1.00 27.98 C
ATOM 24 P C B1039 34.237 109.945 104.969 1.00 31.74 P
ATOM 25 OP1 C B1039 34.163 110.736 103.703 1.00 29.44 O
ATOM 26 OP2 C B1039 33.155 108.989 105.301 1.00 32.15 O
ATOM 27 O5' C B1039 35.566 109.084 104.986 1.00 32.16 O
TER
Atoms:
OP1: (46.842,114.796,117.752)
OP2: (46.582,116.585,115.937)
C3': (43.156,112.783,114.991)
C1': (41.369,114.307,114.799)
C5': (44.079,113.913,117.135)
O6: (42.287,117.764,110.023)
O4': (42.018,114.532,116.045)
C8: (42.844,116.204,113.968)
C2: (39.867,115.337,110.891)
C6: (41.703,116.941,110.721)
C5: (42.015,116.518,112.040)
C4: (41.241,115.550,112.623)
P: (45.985,115.734,117.014)
C4': (42.880,113.407,116.357)
C2': (41.813,112.933,114.296)
O2': (40.895,111.954,114.723)
N1: (40.588,116.288,110.221)
N2: (38.807,114.827,110.242)
N3: (40.161,114.916,112.115)
N7: (43.016,116.933,112.903)
N9: (41.798,115.328,113.852)
O5': (44.778,114.915,116.379)
O3': (43.514,111.405,115.078)
OP2: (46.582,116.585,115.937)
C3': (43.156,112.783,114.991)
C1': (41.369,114.307,114.799)
C5': (44.079,113.913,117.135)
O6: (42.287,117.764,110.023)
O4': (42.018,114.532,116.045)
C8: (42.844,116.204,113.968)
C2: (39.867,115.337,110.891)
C6: (41.703,116.941,110.721)
C5: (42.015,116.518,112.040)
C4: (41.241,115.550,112.623)
P: (45.985,115.734,117.014)
C4': (42.880,113.407,116.357)
C2': (41.813,112.933,114.296)
O2': (40.895,111.954,114.723)
N1: (40.588,116.288,110.221)
N2: (38.807,114.827,110.242)
N3: (40.161,114.916,112.115)
N7: (43.016,116.933,112.903)
N9: (41.798,115.328,113.852)
O5': (44.778,114.915,116.379)
O3': (43.514,111.405,115.078)
OP1: (30.571,108.057,109.184)
OP2: (32.498,107.047,110.538)
C3': (34.744,110.629,107.486)
C1': (35.800,111.465,109.455)
C5': (32.485,110.422,108.655)
O4': (34.415,111.366,109.690)
C8: (36.474,109.242,110.496)
O2': (36.357,112.497,107.412)
C6: (38.495,110.073,113.227)
C5: (37.685,109.900,112.110)
C4: (37.292,111.041,111.440)
P: (31.797,108.240,109.989)
C4': (33.724,111.247,108.431)
C2': (36.067,111.233,107.967)
C2: (38.381,112.341,112.825)
N1: (38.833,111.332,113.567)
N3: (37.610,112.309,111.751)
N6: (38.943,109.061,113.968)
N7: (37.164,108.767,111.504)
N9: (36.494,110.609,110.407)
O5': (32.841,109.112,109.160)
O3': (34.453,111.035,106.138)
OP2: (32.498,107.047,110.538)
C3': (34.744,110.629,107.486)
C1': (35.800,111.465,109.455)
C5': (32.485,110.422,108.655)
O4': (34.415,111.366,109.690)
C8: (36.474,109.242,110.496)
O2': (36.357,112.497,107.412)
C6: (38.495,110.073,113.227)
C5: (37.685,109.900,112.110)
C4: (37.292,111.041,111.440)
P: (31.797,108.240,109.989)
C4': (33.724,111.247,108.431)
C2': (36.067,111.233,107.967)
C2: (38.381,112.341,112.825)
N1: (38.833,111.332,113.567)
N3: (37.610,112.309,111.751)
N6: (38.943,109.061,113.968)
N7: (37.164,108.767,111.504)
N9: (36.494,110.609,110.407)
O5': (32.841,109.112,109.160)
O3': (34.453,111.035,106.138)
Image (generated by PyMOL):