Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0522:0523
Extra
PDB:
ATOM 1 O3' U A 521 22.442 135.380 113.021 1.00 38.49 O
ATOM 2 P C A 522 21.778 134.909 111.641 1.00 41.67 P
ATOM 3 OP1 C A 522 21.220 136.110 110.956 1.00 40.48 O
ATOM 4 OP2 C A 522 20.915 133.714 111.865 1.00 39.20 O
ATOM 5 O5' C A 522 23.027 134.452 110.781 1.00 40.58 O
ATOM 6 C5' C A 522 23.584 133.151 110.934 1.00 41.13 C
ATOM 7 C4' C A 522 24.994 133.152 110.433 1.00 41.49 C
ATOM 8 O4' C A 522 25.742 134.157 111.146 1.00 42.87 O
ATOM 9 C3' C A 522 25.750 131.863 110.654 1.00 41.60 C
ATOM 10 O3' C A 522 25.448 131.017 109.551 1.00 39.74 O
ATOM 11 C2' C A 522 27.204 132.330 110.681 1.00 42.88 C
ATOM 12 O2' C A 522 27.742 132.479 109.384 1.00 43.49 O
ATOM 13 C1' C A 522 27.073 133.725 111.307 1.00 42.49 C
ATOM 14 N1 C A 522 27.452 133.933 112.716 1.00 43.45 N
ATOM 15 C2 C A 522 28.504 134.807 112.996 1.00 44.95 C
ATOM 16 O2 C A 522 29.113 135.331 112.052 1.00 46.00 O
ATOM 17 N3 C A 522 28.832 135.063 114.283 1.00 45.55 N
ATOM 18 C4 C A 522 28.157 134.476 115.272 1.00 46.06 C
ATOM 19 N4 C A 522 28.509 134.770 116.527 1.00 45.90 N
ATOM 20 C5 C A 522 27.091 133.563 115.018 1.00 44.62 C
ATOM 21 C6 C A 522 26.779 133.318 113.736 1.00 44.44 C
ATOM 22 P G A 523 25.706 129.437 109.645 1.00 43.12 P
ATOM 23 OP1 G A 523 24.637 128.787 108.843 1.00 44.50 O
ATOM 24 OP2 G A 523 25.915 129.022 111.062 1.00 41.95 O
ATOM 25 O5' G A 523 27.078 129.252 108.860 1.00 41.35 O
TER
ATOM 1 O3' C B 522 25.448 131.017 109.551 1.00 39.74 O
ATOM 2 P G B 523 25.706 129.437 109.645 1.00 43.12 P
ATOM 3 OP1 G B 523 24.637 128.787 108.843 1.00 44.50 O
ATOM 4 OP2 G B 523 25.915 129.022 111.062 1.00 41.95 O
ATOM 5 O5' G B 523 27.078 129.252 108.860 1.00 41.35 O
ATOM 6 C5' G B 523 27.148 129.490 107.451 1.00 37.34 C
ATOM 7 C4' G B 523 28.373 128.837 106.878 1.00 36.42 C
ATOM 8 O4' G B 523 29.546 129.461 107.457 1.00 37.57 O
ATOM 9 C3' G B 523 28.528 127.341 107.151 1.00 36.76 C
ATOM 10 O3' G B 523 29.225 126.780 106.053 1.00 38.36 O
ATOM 11 C2' G B 523 29.515 127.327 108.311 1.00 37.32 C
ATOM 12 O2' G B 523 30.240 126.120 108.387 1.00 39.41 O
ATOM 13 C1' G B 523 30.432 128.451 107.861 1.00 37.68 C
ATOM 14 N9 G B 523 31.412 129.005 108.785 1.00 39.12 N
ATOM 15 C8 G B 523 31.331 129.143 110.149 1.00 39.76 C
ATOM 16 N7 G B 523 32.395 129.691 110.669 1.00 38.15 N
ATOM 17 C5 G B 523 33.222 129.927 109.582 1.00 37.86 C
ATOM 18 C6 G B 523 34.504 130.509 109.515 1.00 38.89 C
ATOM 19 O6 G B 523 35.196 130.958 110.439 1.00 39.21 O
ATOM 20 N1 G B 523 34.980 130.544 108.207 1.00 38.11 N
ATOM 21 C2 G B 523 34.305 130.077 107.109 1.00 37.80 C
ATOM 22 N2 G B 523 34.929 130.163 105.930 1.00 38.35 N
ATOM 23 N3 G B 523 33.105 129.552 107.161 1.00 39.10 N
ATOM 24 C4 G B 523 32.628 129.505 108.417 1.00 38.58 C
ATOM 25 P A B 524 28.430 126.016 104.899 1.00 39.62 P
ATOM 26 OP1 A B 524 27.328 126.910 104.478 1.00 41.62 O
ATOM 27 OP2 A B 524 28.126 124.631 105.335 1.00 38.71 O
ATOM 28 O5' A B 524 29.502 125.938 103.727 1.00 39.03 O
TER
ATOM 2 P C A 522 21.778 134.909 111.641 1.00 41.67 P
ATOM 3 OP1 C A 522 21.220 136.110 110.956 1.00 40.48 O
ATOM 4 OP2 C A 522 20.915 133.714 111.865 1.00 39.20 O
ATOM 5 O5' C A 522 23.027 134.452 110.781 1.00 40.58 O
ATOM 6 C5' C A 522 23.584 133.151 110.934 1.00 41.13 C
ATOM 7 C4' C A 522 24.994 133.152 110.433 1.00 41.49 C
ATOM 8 O4' C A 522 25.742 134.157 111.146 1.00 42.87 O
ATOM 9 C3' C A 522 25.750 131.863 110.654 1.00 41.60 C
ATOM 10 O3' C A 522 25.448 131.017 109.551 1.00 39.74 O
ATOM 11 C2' C A 522 27.204 132.330 110.681 1.00 42.88 C
ATOM 12 O2' C A 522 27.742 132.479 109.384 1.00 43.49 O
ATOM 13 C1' C A 522 27.073 133.725 111.307 1.00 42.49 C
ATOM 14 N1 C A 522 27.452 133.933 112.716 1.00 43.45 N
ATOM 15 C2 C A 522 28.504 134.807 112.996 1.00 44.95 C
ATOM 16 O2 C A 522 29.113 135.331 112.052 1.00 46.00 O
ATOM 17 N3 C A 522 28.832 135.063 114.283 1.00 45.55 N
ATOM 18 C4 C A 522 28.157 134.476 115.272 1.00 46.06 C
ATOM 19 N4 C A 522 28.509 134.770 116.527 1.00 45.90 N
ATOM 20 C5 C A 522 27.091 133.563 115.018 1.00 44.62 C
ATOM 21 C6 C A 522 26.779 133.318 113.736 1.00 44.44 C
ATOM 22 P G A 523 25.706 129.437 109.645 1.00 43.12 P
ATOM 23 OP1 G A 523 24.637 128.787 108.843 1.00 44.50 O
ATOM 24 OP2 G A 523 25.915 129.022 111.062 1.00 41.95 O
ATOM 25 O5' G A 523 27.078 129.252 108.860 1.00 41.35 O
TER
ATOM 1 O3' C B 522 25.448 131.017 109.551 1.00 39.74 O
ATOM 2 P G B 523 25.706 129.437 109.645 1.00 43.12 P
ATOM 3 OP1 G B 523 24.637 128.787 108.843 1.00 44.50 O
ATOM 4 OP2 G B 523 25.915 129.022 111.062 1.00 41.95 O
ATOM 5 O5' G B 523 27.078 129.252 108.860 1.00 41.35 O
ATOM 6 C5' G B 523 27.148 129.490 107.451 1.00 37.34 C
ATOM 7 C4' G B 523 28.373 128.837 106.878 1.00 36.42 C
ATOM 8 O4' G B 523 29.546 129.461 107.457 1.00 37.57 O
ATOM 9 C3' G B 523 28.528 127.341 107.151 1.00 36.76 C
ATOM 10 O3' G B 523 29.225 126.780 106.053 1.00 38.36 O
ATOM 11 C2' G B 523 29.515 127.327 108.311 1.00 37.32 C
ATOM 12 O2' G B 523 30.240 126.120 108.387 1.00 39.41 O
ATOM 13 C1' G B 523 30.432 128.451 107.861 1.00 37.68 C
ATOM 14 N9 G B 523 31.412 129.005 108.785 1.00 39.12 N
ATOM 15 C8 G B 523 31.331 129.143 110.149 1.00 39.76 C
ATOM 16 N7 G B 523 32.395 129.691 110.669 1.00 38.15 N
ATOM 17 C5 G B 523 33.222 129.927 109.582 1.00 37.86 C
ATOM 18 C6 G B 523 34.504 130.509 109.515 1.00 38.89 C
ATOM 19 O6 G B 523 35.196 130.958 110.439 1.00 39.21 O
ATOM 20 N1 G B 523 34.980 130.544 108.207 1.00 38.11 N
ATOM 21 C2 G B 523 34.305 130.077 107.109 1.00 37.80 C
ATOM 22 N2 G B 523 34.929 130.163 105.930 1.00 38.35 N
ATOM 23 N3 G B 523 33.105 129.552 107.161 1.00 39.10 N
ATOM 24 C4 G B 523 32.628 129.505 108.417 1.00 38.58 C
ATOM 25 P A B 524 28.430 126.016 104.899 1.00 39.62 P
ATOM 26 OP1 A B 524 27.328 126.910 104.478 1.00 41.62 O
ATOM 27 OP2 A B 524 28.126 124.631 105.335 1.00 38.71 O
ATOM 28 O5' A B 524 29.502 125.938 103.727 1.00 39.03 O
TER
Atoms:
C2: (28.504,134.807,112.996)
OP1: (21.220,136.110,110.956)
OP2: (20.915,133.714,111.865)
C4: (28.157,134.476,115.272)
O5': (23.027,134.452,110.781)
C3': (25.750,131.863,110.654)
C1': (27.073,133.725,111.307)
O4': (25.742,134.157,111.146)
C5': (23.584,133.151,110.934)
P: (21.778,134.909,111.641)
O2: (29.113,135.331,112.052)
C4': (24.994,133.152,110.433)
C2': (27.204,132.330,110.681)
O2': (27.742,132.479,109.384)
N1: (27.452,133.933,112.716)
N3: (28.832,135.063,114.283)
N4: (28.509,134.770,116.527)
C6: (26.779,133.318,113.736)
C5: (27.091,133.563,115.018)
O3': (25.448,131.017,109.551)
OP1: (21.220,136.110,110.956)
OP2: (20.915,133.714,111.865)
C4: (28.157,134.476,115.272)
O5': (23.027,134.452,110.781)
C3': (25.750,131.863,110.654)
C1': (27.073,133.725,111.307)
O4': (25.742,134.157,111.146)
C5': (23.584,133.151,110.934)
P: (21.778,134.909,111.641)
O2: (29.113,135.331,112.052)
C4': (24.994,133.152,110.433)
C2': (27.204,132.330,110.681)
O2': (27.742,132.479,109.384)
N1: (27.452,133.933,112.716)
N3: (28.832,135.063,114.283)
N4: (28.509,134.770,116.527)
C6: (26.779,133.318,113.736)
C5: (27.091,133.563,115.018)
O3': (25.448,131.017,109.551)
OP1: (24.637,128.787,108.843)
OP2: (25.915,129.022,111.062)
C3': (28.528,127.341,107.151)
C1': (30.432,128.451,107.861)
C5': (27.148,129.490,107.451)
O6: (35.196,130.958,110.439)
O4': (29.546,129.461,107.457)
C8: (31.331,129.143,110.149)
C2: (34.305,130.077,107.109)
C6: (34.504,130.509,109.515)
C5: (33.222,129.927,109.582)
C4: (32.628,129.505,108.417)
P: (25.706,129.437,109.645)
C4': (28.373,128.837,106.878)
C2': (29.515,127.327,108.311)
O2': (30.240,126.120,108.387)
N1: (34.980,130.544,108.207)
N2: (34.929,130.163,105.930)
N3: (33.105,129.552,107.161)
N7: (32.395,129.691,110.669)
N9: (31.412,129.005,108.785)
O5': (27.078,129.252,108.860)
O3': (29.225,126.780,106.053)
OP2: (25.915,129.022,111.062)
C3': (28.528,127.341,107.151)
C1': (30.432,128.451,107.861)
C5': (27.148,129.490,107.451)
O6: (35.196,130.958,110.439)
O4': (29.546,129.461,107.457)
C8: (31.331,129.143,110.149)
C2: (34.305,130.077,107.109)
C6: (34.504,130.509,109.515)
C5: (33.222,129.927,109.582)
C4: (32.628,129.505,108.417)
P: (25.706,129.437,109.645)
C4': (28.373,128.837,106.878)
C2': (29.515,127.327,108.311)
O2': (30.240,126.120,108.387)
N1: (34.980,130.544,108.207)
N2: (34.929,130.163,105.930)
N3: (33.105,129.552,107.161)
N7: (32.395,129.691,110.669)
N9: (31.412,129.005,108.785)
O5': (27.078,129.252,108.860)
O3': (29.225,126.780,106.053)
Image (generated by PyMOL):