ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QCU:D9:B9

Extra

PDB:
ATOM 1 O3' G A 8 -15.520 7.865 2.854 0.50 21.50 O
ATOM 2 P G A 9 -15.378 8.459 1.380 0.47 22.55 P
ATOM 3 OP1 G A 9 -15.916 7.395 0.485 0.47 25.04 O
ATOM 4 OP2 G A 9 -13.994 8.910 1.152 0.47 24.13 O
ATOM 5 O5' G A 9 -16.239 9.790 1.332 0.50 21.96 O
ATOM 6 C5' G A 9 -17.659 9.687 1.347 0.50 21.67 C
ATOM 7 C4' G A 9 -18.316 11.009 1.601 0.50 19.35 C
ATOM 8 O4' G A 9 -17.831 11.585 2.860 0.50 19.58 O
ATOM 9 C3' G A 9 -18.000 12.133 0.585 0.50 18.23 C
ATOM 10 O3' G A 9 -18.789 11.948 -0.592 0.50 16.81 O
ATOM 11 C2' G A 9 -18.460 13.343 1.422 0.50 18.74 C
ATOM 12 O2' G A 9 -19.860 13.347 1.533 0.50 20.09 O
ATOM 13 C1' G A 9 -17.853 12.990 2.788 0.50 20.03 C
ATOM 14 N9 G A 9 -16.541 13.602 2.940 0.47 20.56 N
ATOM 15 C8 G A 9 -15.316 13.009 2.860 0.47 20.53 C
ATOM 16 N7 G A 9 -14.316 13.816 3.081 0.47 22.58 N
ATOM 17 C5 G A 9 -14.907 15.056 3.234 0.47 22.40 C
ATOM 18 C6 G A 9 -14.378 16.332 3.544 0.47 24.43 C
ATOM 19 O6 G A 9 -13.118 16.581 3.641 0.47 25.88 O
ATOM 20 N1 G A 9 -15.329 17.336 3.759 0.47 24.71 N
ATOM 21 C2 G A 9 -16.682 17.056 3.856 0.47 22.97 C
ATOM 22 N2 G A 9 -17.570 18.069 4.007 0.30 22.34 N
ATOM 23 N3 G A 9 -17.176 15.915 3.385 0.47 21.12 N
ATOM 24 C4 G A 9 -16.288 14.922 3.247 0.47 21.19 C
ATOM 25 P G A 10 -18.237 12.430 -2.027 0.47 16.80 P
ATOM 26 OP1 G A 10 -19.238 11.957 -3.015 0.47 16.37 O
ATOM 27 OP2 G A 10 -16.811 12.054 -2.166 0.47 19.16 O
ATOM 28 O5' G A 10 -18.244 14.037 -1.934 0.50 16.91 O
TER

ATOM 1 O3' G B 8 -15.520 7.865 2.854 0.50 21.50 O
ATOM 2 P C B 9 -15.378 8.459 1.380 0.47 22.55 P
ATOM 3 OP1 C B 9 -15.916 7.395 0.485 0.47 25.04 O
ATOM 4 OP2 C B 9 -13.994 8.910 1.152 0.47 24.13 O
ATOM 5 O5' C B 9 -16.239 9.790 1.332 0.50 21.96 O
ATOM 6 C5' C B 9 -17.659 9.687 1.347 0.50 21.67 C
ATOM 7 C4' C B 9 -18.316 11.009 1.601 0.50 19.35 C
ATOM 8 O4' C B 9 -17.831 11.585 2.860 0.50 19.58 O
ATOM 9 C3' C B 9 -18.000 12.133 0.585 0.50 18.23 C
ATOM 10 O3' C B 9 -18.789 11.948 -0.592 0.50 16.81 O
ATOM 11 C2' C B 9 -18.460 13.343 1.422 0.50 18.74 C
ATOM 12 O2' C B 9 -19.860 13.347 1.533 0.50 20.09 O
ATOM 13 C1' C B 9 -17.853 12.990 2.788 0.50 20.03 C
ATOM 14 N1 C B 9 -16.505 13.547 2.899 0.53 20.23 N
ATOM 15 C2 C B 9 -16.394 14.874 3.333 0.53 19.90 C
ATOM 16 O2 C B 9 -17.388 15.536 3.629 0.53 23.06 O
ATOM 17 N3 C B 9 -15.160 15.414 3.451 0.53 20.74 N
ATOM 18 C4 C B 9 -14.062 14.726 3.169 0.53 20.49 C
ATOM 19 N4 C B 9 -12.895 15.347 3.230 0.53 24.58 N
ATOM 20 C5 C B 9 -14.171 13.372 2.747 0.53 19.88 C
ATOM 21 C6 C B 9 -15.392 12.840 2.606 0.53 20.15 C
ATOM 22 P G B 10 -18.237 12.430 -2.027 0.47 16.80 P
ATOM 23 OP1 G B 10 -19.238 11.957 -3.015 0.47 16.37 O
ATOM 24 OP2 G B 10 -16.811 12.054 -2.166 0.47 19.16 O
ATOM 25 O5' G B 10 -18.244 14.037 -1.934 0.50 16.91 O
TER

Atoms:
OP1: (-15.916,7.395,0.485)
OP2: (-13.994,8.910,1.152)
C3': (-18.000,12.133,0.585)
C1': (-17.853,12.990,2.788)
C5': (-17.659,9.687,1.347)
O6: (-13.118,16.581,3.641)
O4': (-17.831,11.585,2.860)
C8: (-15.316,13.009,2.860)
C2: (-16.682,17.056,3.856)
C6: (-14.378,16.332,3.544)
C5: (-14.907,15.056,3.234)
C4: (-16.288,14.922,3.247)
P: (-15.378,8.459,1.380)
C4': (-18.316,11.009,1.601)
C2': (-18.460,13.343,1.422)
O2': (-19.860,13.347,1.533)
N1: (-15.329,17.336,3.759)
N2: (-17.570,18.069,4.007)
N3: (-17.176,15.915,3.385)
N7: (-14.316,13.816,3.081)
N9: (-16.541,13.602,2.940)
O5': (-16.239,9.790,1.332)
O3': (-18.789,11.948,-0.592)
C2: (-16.394,14.874,3.333)
OP1: (-15.916,7.395,0.485)
OP2: (-13.994,8.910,1.152)
C4: (-14.062,14.726,3.169)
O5': (-16.239,9.790,1.332)
C3': (-18.000,12.133,0.585)
C1': (-17.853,12.990,2.788)
O4': (-17.831,11.585,2.860)
C5': (-17.659,9.687,1.347)
P: (-15.378,8.459,1.380)
O2: (-17.388,15.536,3.629)
C4': (-18.316,11.009,1.601)
C2': (-18.460,13.343,1.422)
O2': (-19.860,13.347,1.533)
N1: (-16.505,13.547,2.899)
N3: (-15.160,15.414,3.451)
N4: (-12.895,15.347,3.230)
C6: (-15.392,12.840,2.606)
C5: (-14.171,13.372,2.747)
O3': (-18.789,11.948,-0.592)
Image (generated by PyMOL):
PyMOL image
show in jmol