Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0611:0889
Extra
PDB:
ATOM 1 O3' G A 610 40.069 112.735 82.833 1.00 29.03 O
ATOM 2 P U A 611 40.805 111.405 83.350 1.00 27.81 P
ATOM 3 OP1 U A 611 40.767 110.433 82.238 1.00 26.21 O
ATOM 4 OP2 U A 611 40.276 111.018 84.673 1.00 25.47 O
ATOM 5 O5' U A 611 42.316 111.863 83.554 1.00 29.75 O
ATOM 6 C5' U A 611 43.096 112.324 82.437 1.00 30.17 C
ATOM 7 C4' U A 611 44.485 112.706 82.882 1.00 30.46 C
ATOM 8 O4' U A 611 44.431 113.841 83.780 1.00 30.22 O
ATOM 9 C3' U A 611 45.247 111.658 83.672 1.00 30.62 C
ATOM 10 O3' U A 611 45.820 110.686 82.815 1.00 30.22 O
ATOM 11 C2' U A 611 46.304 112.501 84.372 1.00 31.71 C
ATOM 12 O2' U A 611 47.369 112.876 83.521 1.00 31.49 O
ATOM 13 C1' U A 611 45.497 113.751 84.719 1.00 32.70 C
ATOM 14 N1 U A 611 44.939 113.706 86.081 1.00 34.52 N
ATOM 15 C2 U A 611 45.782 114.032 87.139 1.00 34.31 C
ATOM 16 O2 U A 611 46.956 114.310 86.987 1.00 34.22 O
ATOM 17 N3 U A 611 45.196 114.002 88.382 1.00 33.94 N
ATOM 18 C4 U A 611 43.886 113.667 88.677 1.00 33.85 C
ATOM 19 O4 U A 611 43.501 113.688 89.846 1.00 33.48 O
ATOM 20 C5 U A 611 43.088 113.325 87.540 1.00 34.43 C
ATOM 21 C6 U A 611 43.624 113.356 86.312 1.00 34.78 C
ATOM 22 P U A 612 46.218 109.250 83.398 1.00 30.61 P
ATOM 23 OP1 U A 612 46.760 108.485 82.258 1.00 28.12 O
ATOM 24 OP2 U A 612 45.058 108.716 84.151 1.00 31.76 O
ATOM 25 O5' U A 612 47.380 109.562 84.445 1.00 31.01 O
TER
ATOM 1 O3' G B 888 48.320 115.911 80.929 1.00 28.61 O
ATOM 2 P G B 889 47.011 114.990 80.766 1.00 30.46 P
ATOM 3 OP1 G B 889 46.075 115.432 81.824 1.00 29.53 O
ATOM 4 OP2 G B 889 47.376 113.555 80.667 1.00 28.81 O
ATOM 5 O5' G B 889 46.434 115.434 79.354 1.00 29.43 O
ATOM 6 C5' G B 889 46.016 116.790 79.139 1.00 29.72 C
ATOM 7 C4' G B 889 45.822 117.050 77.669 1.00 29.66 C
ATOM 8 O4' G B 889 47.061 116.757 76.973 1.00 30.14 O
ATOM 9 C3' G B 889 44.824 116.172 76.933 1.00 29.89 C
ATOM 10 O3' G B 889 43.469 116.546 77.132 1.00 30.64 O
ATOM 11 C2' G B 889 45.264 116.387 75.500 1.00 28.54 C
ATOM 12 O2' G B 889 44.956 117.701 75.078 1.00 27.94 O
ATOM 13 C1' G B 889 46.775 116.289 75.663 1.00 29.20 C
ATOM 14 N9 G B 889 47.257 114.914 75.538 1.00 29.58 N
ATOM 15 C8 G B 889 47.771 114.113 76.533 1.00 29.49 C
ATOM 16 N7 G B 889 48.125 112.932 76.106 1.00 28.24 N
ATOM 17 C5 G B 889 47.822 112.948 74.753 1.00 28.37 C
ATOM 18 C6 G B 889 47.986 111.949 73.771 1.00 28.93 C
ATOM 19 O6 G B 889 48.458 110.820 73.902 1.00 30.59 O
ATOM 20 N1 G B 889 47.541 112.375 72.520 1.00 29.87 N
ATOM 21 C2 G B 889 47.019 113.616 72.248 1.00 29.71 C
ATOM 22 N2 G B 889 46.652 113.849 70.979 1.00 24.36 N
ATOM 23 N3 G B 889 46.869 114.564 73.160 1.00 30.77 N
ATOM 24 C4 G B 889 47.286 114.161 74.384 1.00 29.59 C
ATOM 25 P U B 890 42.313 115.460 76.886 1.00 29.28 P
ATOM 26 OP1 U B 890 41.017 116.157 77.072 1.00 27.64 O
ATOM 27 OP2 U B 890 42.613 114.257 77.682 1.00 25.86 O
ATOM 28 O5' U B 890 42.499 115.048 75.358 1.00 27.79 O
TER
ATOM 2 P U A 611 40.805 111.405 83.350 1.00 27.81 P
ATOM 3 OP1 U A 611 40.767 110.433 82.238 1.00 26.21 O
ATOM 4 OP2 U A 611 40.276 111.018 84.673 1.00 25.47 O
ATOM 5 O5' U A 611 42.316 111.863 83.554 1.00 29.75 O
ATOM 6 C5' U A 611 43.096 112.324 82.437 1.00 30.17 C
ATOM 7 C4' U A 611 44.485 112.706 82.882 1.00 30.46 C
ATOM 8 O4' U A 611 44.431 113.841 83.780 1.00 30.22 O
ATOM 9 C3' U A 611 45.247 111.658 83.672 1.00 30.62 C
ATOM 10 O3' U A 611 45.820 110.686 82.815 1.00 30.22 O
ATOM 11 C2' U A 611 46.304 112.501 84.372 1.00 31.71 C
ATOM 12 O2' U A 611 47.369 112.876 83.521 1.00 31.49 O
ATOM 13 C1' U A 611 45.497 113.751 84.719 1.00 32.70 C
ATOM 14 N1 U A 611 44.939 113.706 86.081 1.00 34.52 N
ATOM 15 C2 U A 611 45.782 114.032 87.139 1.00 34.31 C
ATOM 16 O2 U A 611 46.956 114.310 86.987 1.00 34.22 O
ATOM 17 N3 U A 611 45.196 114.002 88.382 1.00 33.94 N
ATOM 18 C4 U A 611 43.886 113.667 88.677 1.00 33.85 C
ATOM 19 O4 U A 611 43.501 113.688 89.846 1.00 33.48 O
ATOM 20 C5 U A 611 43.088 113.325 87.540 1.00 34.43 C
ATOM 21 C6 U A 611 43.624 113.356 86.312 1.00 34.78 C
ATOM 22 P U A 612 46.218 109.250 83.398 1.00 30.61 P
ATOM 23 OP1 U A 612 46.760 108.485 82.258 1.00 28.12 O
ATOM 24 OP2 U A 612 45.058 108.716 84.151 1.00 31.76 O
ATOM 25 O5' U A 612 47.380 109.562 84.445 1.00 31.01 O
TER
ATOM 1 O3' G B 888 48.320 115.911 80.929 1.00 28.61 O
ATOM 2 P G B 889 47.011 114.990 80.766 1.00 30.46 P
ATOM 3 OP1 G B 889 46.075 115.432 81.824 1.00 29.53 O
ATOM 4 OP2 G B 889 47.376 113.555 80.667 1.00 28.81 O
ATOM 5 O5' G B 889 46.434 115.434 79.354 1.00 29.43 O
ATOM 6 C5' G B 889 46.016 116.790 79.139 1.00 29.72 C
ATOM 7 C4' G B 889 45.822 117.050 77.669 1.00 29.66 C
ATOM 8 O4' G B 889 47.061 116.757 76.973 1.00 30.14 O
ATOM 9 C3' G B 889 44.824 116.172 76.933 1.00 29.89 C
ATOM 10 O3' G B 889 43.469 116.546 77.132 1.00 30.64 O
ATOM 11 C2' G B 889 45.264 116.387 75.500 1.00 28.54 C
ATOM 12 O2' G B 889 44.956 117.701 75.078 1.00 27.94 O
ATOM 13 C1' G B 889 46.775 116.289 75.663 1.00 29.20 C
ATOM 14 N9 G B 889 47.257 114.914 75.538 1.00 29.58 N
ATOM 15 C8 G B 889 47.771 114.113 76.533 1.00 29.49 C
ATOM 16 N7 G B 889 48.125 112.932 76.106 1.00 28.24 N
ATOM 17 C5 G B 889 47.822 112.948 74.753 1.00 28.37 C
ATOM 18 C6 G B 889 47.986 111.949 73.771 1.00 28.93 C
ATOM 19 O6 G B 889 48.458 110.820 73.902 1.00 30.59 O
ATOM 20 N1 G B 889 47.541 112.375 72.520 1.00 29.87 N
ATOM 21 C2 G B 889 47.019 113.616 72.248 1.00 29.71 C
ATOM 22 N2 G B 889 46.652 113.849 70.979 1.00 24.36 N
ATOM 23 N3 G B 889 46.869 114.564 73.160 1.00 30.77 N
ATOM 24 C4 G B 889 47.286 114.161 74.384 1.00 29.59 C
ATOM 25 P U B 890 42.313 115.460 76.886 1.00 29.28 P
ATOM 26 OP1 U B 890 41.017 116.157 77.072 1.00 27.64 O
ATOM 27 OP2 U B 890 42.613 114.257 77.682 1.00 25.86 O
ATOM 28 O5' U B 890 42.499 115.048 75.358 1.00 27.79 O
TER
Atoms:
C4: (43.886,113.667,88.677)
N3: (45.196,114.002,88.382)
OP1: (40.767,110.433,82.238)
OP2: (40.276,111.018,84.673)
C2: (45.782,114.032,87.139)
C1': (45.497,113.751,84.719)
C3': (45.247,111.658,83.672)
O5': (42.316,111.863,83.554)
O4': (44.431,113.841,83.780)
C5': (43.096,112.324,82.437)
P: (40.805,111.405,83.350)
C4': (44.485,112.706,82.882)
C2': (46.304,112.501,84.372)
O2': (47.369,112.876,83.521)
N1: (44.939,113.706,86.081)
O4: (43.501,113.688,89.846)
O2: (46.956,114.310,86.987)
C6: (43.624,113.356,86.312)
C5: (43.088,113.325,87.540)
O3': (45.820,110.686,82.815)
N3: (45.196,114.002,88.382)
OP1: (40.767,110.433,82.238)
OP2: (40.276,111.018,84.673)
C2: (45.782,114.032,87.139)
C1': (45.497,113.751,84.719)
C3': (45.247,111.658,83.672)
O5': (42.316,111.863,83.554)
O4': (44.431,113.841,83.780)
C5': (43.096,112.324,82.437)
P: (40.805,111.405,83.350)
C4': (44.485,112.706,82.882)
C2': (46.304,112.501,84.372)
O2': (47.369,112.876,83.521)
N1: (44.939,113.706,86.081)
O4: (43.501,113.688,89.846)
O2: (46.956,114.310,86.987)
C6: (43.624,113.356,86.312)
C5: (43.088,113.325,87.540)
O3': (45.820,110.686,82.815)
OP1: (46.075,115.432,81.824)
OP2: (47.376,113.555,80.667)
C3': (44.824,116.172,76.933)
C1': (46.775,116.289,75.663)
C5': (46.016,116.790,79.139)
O6: (48.458,110.820,73.902)
O4': (47.061,116.757,76.973)
C8: (47.771,114.113,76.533)
C2: (47.019,113.616,72.248)
C6: (47.986,111.949,73.771)
C5: (47.822,112.948,74.753)
C4: (47.286,114.161,74.384)
P: (47.011,114.990,80.766)
C4': (45.822,117.050,77.669)
C2': (45.264,116.387,75.500)
O2': (44.956,117.701,75.078)
N1: (47.541,112.375,72.520)
N2: (46.652,113.849,70.979)
N3: (46.869,114.564,73.160)
N7: (48.125,112.932,76.106)
N9: (47.257,114.914,75.538)
O5': (46.434,115.434,79.354)
O3': (43.469,116.546,77.132)
OP2: (47.376,113.555,80.667)
C3': (44.824,116.172,76.933)
C1': (46.775,116.289,75.663)
C5': (46.016,116.790,79.139)
O6: (48.458,110.820,73.902)
O4': (47.061,116.757,76.973)
C8: (47.771,114.113,76.533)
C2: (47.019,113.616,72.248)
C6: (47.986,111.949,73.771)
C5: (47.822,112.948,74.753)
C4: (47.286,114.161,74.384)
P: (47.011,114.990,80.766)
C4': (45.822,117.050,77.669)
C2': (45.264,116.387,75.500)
O2': (44.956,117.701,75.078)
N1: (47.541,112.375,72.520)
N2: (46.652,113.849,70.979)
N3: (46.869,114.564,73.160)
N7: (48.125,112.932,76.106)
N9: (47.257,114.914,75.538)
O5': (46.434,115.434,79.354)
O3': (43.469,116.546,77.132)
Image (generated by PyMOL):