Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01259:01289
Extra
PDB:
ATOM 1 O3' G A1258 20.593 101.387 64.472 1.00 47.47 O
ATOM 2 P G A1259 20.849 102.723 63.600 1.00 50.44 P
ATOM 3 OP1 G A1259 19.697 102.834 62.659 1.00 53.40 O
ATOM 4 OP2 G A1259 22.233 102.693 63.067 1.00 51.00 O
ATOM 5 O5' G A1259 20.755 103.945 64.620 1.00 44.07 O
ATOM 6 C5' G A1259 19.497 104.367 65.143 1.00 40.27 C
ATOM 7 C4' G A1259 19.680 105.392 66.247 1.00 41.40 C
ATOM 8 O4' G A1259 20.723 104.957 67.170 1.00 40.74 O
ATOM 9 C3' G A1259 20.099 106.807 65.880 1.00 39.61 C
ATOM 10 O3' G A1259 19.000 107.589 65.413 1.00 44.13 O
ATOM 11 C2' G A1259 20.588 107.322 67.228 1.00 39.08 C
ATOM 12 O2' G A1259 19.535 107.627 68.115 1.00 34.52 O
ATOM 13 C1' G A1259 21.326 106.095 67.768 1.00 38.63 C
ATOM 14 N9 G A1259 22.745 106.127 67.417 1.00 37.86 N
ATOM 15 C8 G A1259 23.414 105.288 66.563 1.00 37.72 C
ATOM 16 N7 G A1259 24.671 105.606 66.413 1.00 38.94 N
ATOM 17 C5 G A1259 24.846 106.719 67.225 1.00 36.97 C
ATOM 18 C6 G A1259 25.996 107.522 67.446 1.00 35.42 C
ATOM 19 O6 G A1259 27.109 107.412 66.941 1.00 32.86 O
ATOM 20 N1 G A1259 25.741 108.551 68.343 1.00 34.58 N
ATOM 21 C2 G A1259 24.529 108.794 68.937 1.00 37.14 C
ATOM 22 N2 G A1259 24.468 109.859 69.741 1.00 33.26 N
ATOM 23 N3 G A1259 23.445 108.052 68.741 1.00 38.16 N
ATOM 24 C4 G A1259 23.676 107.041 67.871 1.00 37.13 C
ATOM 25 P C A1260 19.264 108.952 64.582 1.00 46.80 P
ATOM 26 OP1 C A1260 17.938 109.488 64.185 1.00 48.09 O
ATOM 27 OP2 C A1260 20.279 108.673 63.539 1.00 45.55 O
ATOM 28 O5' C A1260 19.857 109.984 65.641 1.00 43.20 O
TER
ATOM 1 O3' A B1288 20.667 114.337 77.132 1.00 41.16 O
ATOM 2 P A B1289 20.694 115.624 76.163 1.00 42.66 P
ATOM 3 OP1 A B1289 21.430 116.673 76.902 1.00 41.02 O
ATOM 4 OP2 A B1289 19.339 115.921 75.680 1.00 39.32 O
ATOM 5 O5' A B1289 21.589 115.136 74.935 1.00 40.61 O
ATOM 6 C5' A B1289 23.029 115.224 74.991 1.00 38.82 C
ATOM 7 C4' A B1289 23.648 114.595 73.765 1.00 38.78 C
ATOM 8 O4' A B1289 23.165 113.231 73.679 1.00 39.65 O
ATOM 9 C3' A B1289 23.299 115.209 72.414 1.00 35.74 C
ATOM 10 O3' A B1289 24.191 116.248 72.035 1.00 35.44 O
ATOM 11 C2' A B1289 23.512 114.032 71.472 1.00 36.45 C
ATOM 12 O2' A B1289 24.868 113.797 71.152 1.00 34.29 O
ATOM 13 C1' A B1289 22.999 112.870 72.320 1.00 36.50 C
ATOM 14 N9 A B1289 21.581 112.607 72.084 1.00 36.23 N
ATOM 15 C8 A B1289 20.500 113.386 72.426 1.00 34.76 C
ATOM 16 N7 A B1289 19.351 112.877 72.065 1.00 31.76 N
ATOM 17 C5 A B1289 19.697 111.684 71.445 1.00 33.09 C
ATOM 18 C6 A B1289 18.931 110.677 70.841 1.00 33.20 C
ATOM 19 N6 A B1289 17.603 110.723 70.736 1.00 35.23 N
ATOM 20 N1 A B1289 19.583 109.610 70.334 1.00 32.92 N
ATOM 21 C2 A B1289 20.919 109.580 70.414 1.00 33.57 C
ATOM 22 N3 A B1289 21.750 110.470 70.941 1.00 34.57 N
ATOM 23 C4 A B1289 21.066 111.507 71.452 1.00 34.00 C
ATOM 24 P A B1290 23.793 117.792 72.246 1.00 38.93 P
ATOM 25 OP1 A B1290 24.993 118.540 71.785 1.00 37.37 O
ATOM 26 OP2 A B1290 23.300 117.958 73.631 1.00 38.68 O
ATOM 27 O5' A B1290 22.535 118.138 71.322 1.00 39.21 O
TER
ATOM 2 P G A1259 20.849 102.723 63.600 1.00 50.44 P
ATOM 3 OP1 G A1259 19.697 102.834 62.659 1.00 53.40 O
ATOM 4 OP2 G A1259 22.233 102.693 63.067 1.00 51.00 O
ATOM 5 O5' G A1259 20.755 103.945 64.620 1.00 44.07 O
ATOM 6 C5' G A1259 19.497 104.367 65.143 1.00 40.27 C
ATOM 7 C4' G A1259 19.680 105.392 66.247 1.00 41.40 C
ATOM 8 O4' G A1259 20.723 104.957 67.170 1.00 40.74 O
ATOM 9 C3' G A1259 20.099 106.807 65.880 1.00 39.61 C
ATOM 10 O3' G A1259 19.000 107.589 65.413 1.00 44.13 O
ATOM 11 C2' G A1259 20.588 107.322 67.228 1.00 39.08 C
ATOM 12 O2' G A1259 19.535 107.627 68.115 1.00 34.52 O
ATOM 13 C1' G A1259 21.326 106.095 67.768 1.00 38.63 C
ATOM 14 N9 G A1259 22.745 106.127 67.417 1.00 37.86 N
ATOM 15 C8 G A1259 23.414 105.288 66.563 1.00 37.72 C
ATOM 16 N7 G A1259 24.671 105.606 66.413 1.00 38.94 N
ATOM 17 C5 G A1259 24.846 106.719 67.225 1.00 36.97 C
ATOM 18 C6 G A1259 25.996 107.522 67.446 1.00 35.42 C
ATOM 19 O6 G A1259 27.109 107.412 66.941 1.00 32.86 O
ATOM 20 N1 G A1259 25.741 108.551 68.343 1.00 34.58 N
ATOM 21 C2 G A1259 24.529 108.794 68.937 1.00 37.14 C
ATOM 22 N2 G A1259 24.468 109.859 69.741 1.00 33.26 N
ATOM 23 N3 G A1259 23.445 108.052 68.741 1.00 38.16 N
ATOM 24 C4 G A1259 23.676 107.041 67.871 1.00 37.13 C
ATOM 25 P C A1260 19.264 108.952 64.582 1.00 46.80 P
ATOM 26 OP1 C A1260 17.938 109.488 64.185 1.00 48.09 O
ATOM 27 OP2 C A1260 20.279 108.673 63.539 1.00 45.55 O
ATOM 28 O5' C A1260 19.857 109.984 65.641 1.00 43.20 O
TER
ATOM 1 O3' A B1288 20.667 114.337 77.132 1.00 41.16 O
ATOM 2 P A B1289 20.694 115.624 76.163 1.00 42.66 P
ATOM 3 OP1 A B1289 21.430 116.673 76.902 1.00 41.02 O
ATOM 4 OP2 A B1289 19.339 115.921 75.680 1.00 39.32 O
ATOM 5 O5' A B1289 21.589 115.136 74.935 1.00 40.61 O
ATOM 6 C5' A B1289 23.029 115.224 74.991 1.00 38.82 C
ATOM 7 C4' A B1289 23.648 114.595 73.765 1.00 38.78 C
ATOM 8 O4' A B1289 23.165 113.231 73.679 1.00 39.65 O
ATOM 9 C3' A B1289 23.299 115.209 72.414 1.00 35.74 C
ATOM 10 O3' A B1289 24.191 116.248 72.035 1.00 35.44 O
ATOM 11 C2' A B1289 23.512 114.032 71.472 1.00 36.45 C
ATOM 12 O2' A B1289 24.868 113.797 71.152 1.00 34.29 O
ATOM 13 C1' A B1289 22.999 112.870 72.320 1.00 36.50 C
ATOM 14 N9 A B1289 21.581 112.607 72.084 1.00 36.23 N
ATOM 15 C8 A B1289 20.500 113.386 72.426 1.00 34.76 C
ATOM 16 N7 A B1289 19.351 112.877 72.065 1.00 31.76 N
ATOM 17 C5 A B1289 19.697 111.684 71.445 1.00 33.09 C
ATOM 18 C6 A B1289 18.931 110.677 70.841 1.00 33.20 C
ATOM 19 N6 A B1289 17.603 110.723 70.736 1.00 35.23 N
ATOM 20 N1 A B1289 19.583 109.610 70.334 1.00 32.92 N
ATOM 21 C2 A B1289 20.919 109.580 70.414 1.00 33.57 C
ATOM 22 N3 A B1289 21.750 110.470 70.941 1.00 34.57 N
ATOM 23 C4 A B1289 21.066 111.507 71.452 1.00 34.00 C
ATOM 24 P A B1290 23.793 117.792 72.246 1.00 38.93 P
ATOM 25 OP1 A B1290 24.993 118.540 71.785 1.00 37.37 O
ATOM 26 OP2 A B1290 23.300 117.958 73.631 1.00 38.68 O
ATOM 27 O5' A B1290 22.535 118.138 71.322 1.00 39.21 O
TER
Atoms:
OP1: (19.697,102.834,62.659)
OP2: (22.233,102.693,63.067)
C3': (20.099,106.807,65.880)
C1': (21.326,106.095,67.768)
C5': (19.497,104.367,65.143)
O6: (27.109,107.412,66.941)
O4': (20.723,104.957,67.170)
C8: (23.414,105.288,66.563)
C2: (24.529,108.794,68.937)
C6: (25.996,107.522,67.446)
C5: (24.846,106.719,67.225)
C4: (23.676,107.041,67.871)
P: (20.849,102.723,63.600)
C4': (19.680,105.392,66.247)
C2': (20.588,107.322,67.228)
O2': (19.535,107.627,68.115)
N1: (25.741,108.551,68.343)
N2: (24.468,109.859,69.741)
N3: (23.445,108.052,68.741)
N7: (24.671,105.606,66.413)
N9: (22.745,106.127,67.417)
O5': (20.755,103.945,64.620)
O3': (19.000,107.589,65.413)
OP2: (22.233,102.693,63.067)
C3': (20.099,106.807,65.880)
C1': (21.326,106.095,67.768)
C5': (19.497,104.367,65.143)
O6: (27.109,107.412,66.941)
O4': (20.723,104.957,67.170)
C8: (23.414,105.288,66.563)
C2: (24.529,108.794,68.937)
C6: (25.996,107.522,67.446)
C5: (24.846,106.719,67.225)
C4: (23.676,107.041,67.871)
P: (20.849,102.723,63.600)
C4': (19.680,105.392,66.247)
C2': (20.588,107.322,67.228)
O2': (19.535,107.627,68.115)
N1: (25.741,108.551,68.343)
N2: (24.468,109.859,69.741)
N3: (23.445,108.052,68.741)
N7: (24.671,105.606,66.413)
N9: (22.745,106.127,67.417)
O5': (20.755,103.945,64.620)
O3': (19.000,107.589,65.413)
OP1: (21.430,116.673,76.902)
OP2: (19.339,115.921,75.680)
C3': (23.299,115.209,72.414)
C1': (22.999,112.870,72.320)
C5': (23.029,115.224,74.991)
O4': (23.165,113.231,73.679)
C8: (20.500,113.386,72.426)
O2': (24.868,113.797,71.152)
C6: (18.931,110.677,70.841)
C5: (19.697,111.684,71.445)
C4: (21.066,111.507,71.452)
P: (20.694,115.624,76.163)
C4': (23.648,114.595,73.765)
C2': (23.512,114.032,71.472)
C2: (20.919,109.580,70.414)
N1: (19.583,109.610,70.334)
N3: (21.750,110.470,70.941)
N6: (17.603,110.723,70.736)
N7: (19.351,112.877,72.065)
N9: (21.581,112.607,72.084)
O5': (21.589,115.136,74.935)
O3': (24.191,116.248,72.035)
OP2: (19.339,115.921,75.680)
C3': (23.299,115.209,72.414)
C1': (22.999,112.870,72.320)
C5': (23.029,115.224,74.991)
O4': (23.165,113.231,73.679)
C8: (20.500,113.386,72.426)
O2': (24.868,113.797,71.152)
C6: (18.931,110.677,70.841)
C5: (19.697,111.684,71.445)
C4: (21.066,111.507,71.452)
P: (20.694,115.624,76.163)
C4': (23.648,114.595,73.765)
C2': (23.512,114.032,71.472)
C2: (20.919,109.580,70.414)
N1: (19.583,109.610,70.334)
N3: (21.750,110.470,70.941)
N6: (17.603,110.723,70.736)
N7: (19.351,112.877,72.065)
N9: (21.581,112.607,72.084)
O5': (21.589,115.136,74.935)
O3': (24.191,116.248,72.035)
Image (generated by PyMOL):