ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A2149:A2150

Extra

PDB:
ATOM 1 O3' G A2148 -123.159 -60.549 32.373 1.00 36.88 O
ATOM 2 P U A2149 -122.945 -59.291 31.412 1.00 40.34 P
ATOM 3 OP1 U A2149 -121.929 -58.429 32.061 1.00 61.33 O
ATOM 4 OP2 U A2149 -124.278 -58.735 31.083 1.00 61.42 O
ATOM 5 O5' U A2149 -122.334 -59.930 30.093 1.00 27.18 O
ATOM 6 C5' U A2149 -121.035 -60.522 30.107 1.00 27.18 C
ATOM 7 C4' U A2149 -120.799 -61.257 28.818 1.00 27.18 C
ATOM 8 O4' U A2149 -121.832 -62.253 28.669 1.00 27.18 O
ATOM 9 C3' U A2149 -120.889 -60.421 27.548 1.00 27.18 C
ATOM 10 O3' U A2149 -119.618 -59.881 27.223 1.00 27.18 O
ATOM 11 C2' U A2149 -121.274 -61.449 26.487 1.00 27.18 C
ATOM 12 O2' U A2149 -120.144 -62.128 25.958 1.00 27.18 O
ATOM 13 C1' U A2149 -122.114 -62.440 27.294 1.00 27.18 C
ATOM 14 N1 U A2149 -123.570 -62.377 27.090 1.00 20.13 N
ATOM 15 C2 U A2149 -124.084 -62.959 25.945 1.00 20.35 C
ATOM 16 O2 U A2149 -123.384 -63.486 25.103 1.00 20.38 O
ATOM 17 N3 U A2149 -125.449 -62.903 25.830 1.00 20.44 N
ATOM 18 C4 U A2149 -126.335 -62.338 26.725 1.00 20.33 C
ATOM 19 O4 U A2149 -127.552 -62.419 26.518 1.00 20.24 O
ATOM 20 C5 U A2149 -125.723 -61.748 27.872 1.00 20.45 C
ATOM 21 C6 U A2149 -124.397 -61.782 28.011 1.00 20.32 C
ATOM 22 P A A2150 -119.301 -58.337 27.503 1.00 18.79 P
ATOM 23 OP1 A A2150 -118.809 -58.265 28.910 1.00 34.51 O
ATOM 24 OP2 A A2150 -120.430 -57.477 27.078 1.00 34.62 O
ATOM 25 O5' A A2150 -118.071 -58.077 26.541 1.00 17.96 O
TER

ATOM 1 O3' U B2149 -119.618 -59.881 27.223 1.00 27.18 O
ATOM 2 P A B2150 -119.301 -58.337 27.503 1.00 18.79 P
ATOM 3 OP1 A B2150 -118.809 -58.265 28.910 1.00 34.51 O
ATOM 4 OP2 A B2150 -120.430 -57.477 27.078 1.00 34.62 O
ATOM 5 O5' A B2150 -118.071 -58.077 26.541 1.00 17.96 O
ATOM 6 C5' A B2150 -116.911 -58.908 26.641 1.00 17.96 C
ATOM 7 C4' A B2150 -116.297 -59.116 25.287 1.00 17.96 C
ATOM 8 O4' A B2150 -117.181 -59.902 24.448 1.00 17.96 O
ATOM 9 C3' A B2150 -116.027 -57.843 24.514 1.00 17.96 C
ATOM 10 O3' A B2150 -114.778 -57.297 24.944 1.00 17.96 O
ATOM 11 C2' A B2150 -116.041 -58.323 23.062 1.00 17.96 C
ATOM 12 O2' A B2150 -114.797 -58.858 22.654 1.00 17.96 O
ATOM 13 C1' A B2150 -117.080 -59.455 23.103 1.00 17.96 C
ATOM 14 N9 A B2150 -118.427 -59.103 22.631 1.00 30.55 N
ATOM 15 C8 A B2150 -119.525 -58.787 23.398 1.00 30.55 C
ATOM 16 N7 A B2150 -120.603 -58.529 22.699 1.00 30.60 N
ATOM 17 C5 A B2150 -120.191 -58.678 21.385 1.00 30.54 C
ATOM 18 C6 A B2150 -120.867 -58.537 20.165 1.00 30.49 C
ATOM 19 N6 A B2150 -122.154 -58.218 20.060 1.00 30.47 N
ATOM 20 N1 A B2150 -120.166 -58.744 19.035 1.00 30.50 N
ATOM 21 C2 A B2150 -118.879 -59.085 19.134 1.00 30.52 C
ATOM 22 N3 A B2150 -118.137 -59.259 20.220 1.00 30.49 N
ATOM 23 C4 A B2150 -118.857 -59.033 21.327 1.00 30.54 C
ATOM 24 P A B2151 -114.568 -55.700 24.977 1.00 23.07 P
ATOM 25 OP1 A B2151 -113.309 -55.425 25.714 1.00 82.63 O
ATOM 26 OP2 A B2151 -115.831 -55.036 25.411 1.00 82.61 O
ATOM 27 O5' A B2151 -114.307 -55.351 23.443 1.00 25.34 O
TER

Atoms:
C4: (-126.335,-62.338,26.725)
N3: (-125.449,-62.903,25.830)
OP1: (-121.929,-58.429,32.061)
OP2: (-124.278,-58.735,31.083)
C2: (-124.084,-62.959,25.945)
C1': (-122.114,-62.440,27.294)
C3': (-120.889,-60.421,27.548)
O5': (-122.334,-59.930,30.093)
O4': (-121.832,-62.253,28.669)
C5': (-121.035,-60.522,30.107)
P: (-122.945,-59.291,31.412)
C4': (-120.799,-61.257,28.818)
C2': (-121.274,-61.449,26.487)
O2': (-120.144,-62.128,25.958)
N1: (-123.570,-62.377,27.090)
O4: (-127.552,-62.419,26.518)
O2: (-123.384,-63.486,25.103)
C6: (-124.397,-61.782,28.011)
C5: (-125.723,-61.748,27.872)
O3': (-119.618,-59.881,27.223)
OP1: (-118.809,-58.265,28.910)
OP2: (-120.430,-57.477,27.078)
C3': (-116.027,-57.843,24.514)
C1': (-117.080,-59.455,23.103)
C5': (-116.911,-58.908,26.641)
O4': (-117.181,-59.902,24.448)
C8: (-119.525,-58.787,23.398)
O2': (-114.797,-58.858,22.654)
C6: (-120.867,-58.537,20.165)
C5: (-120.191,-58.678,21.385)
C4: (-118.857,-59.033,21.327)
P: (-119.301,-58.337,27.503)
C4': (-116.297,-59.116,25.287)
C2': (-116.041,-58.323,23.062)
C2: (-118.879,-59.085,19.134)
N1: (-120.166,-58.744,19.035)
N3: (-118.137,-59.259,20.220)
N6: (-122.154,-58.218,20.060)
N7: (-120.603,-58.529,22.699)
N9: (-118.427,-59.103,22.631)
O5': (-118.071,-58.077,26.541)
O3': (-114.778,-57.297,24.944)
Image (generated by PyMOL):
PyMOL image
show in jmol