Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U9S:A108:A110
Extra
PDB:
ATOM 1 O3' A A 107 52.280 -4.329 124.864 1.00 36.84 O
ATOM 2 P G A 108 52.602 -3.060 123.931 1.00 43.53 P
ATOM 3 OP1 G A 108 51.522 -2.951 122.910 1.00 23.69 O
ATOM 4 OP2 G A 108 54.028 -3.114 123.483 1.00 39.85 O
ATOM 5 O5' G A 108 52.468 -1.842 124.932 1.00 40.53 O
ATOM 6 C5' G A 108 51.199 -1.505 125.435 1.00 37.78 C
ATOM 7 C4' G A 108 51.306 -1.114 126.874 1.00 39.56 C
ATOM 8 O4' G A 108 51.772 0.246 126.989 1.00 48.19 O
ATOM 9 C3' G A 108 49.990 -1.135 127.567 1.00 40.42 C
ATOM 10 O3' G A 108 49.880 -2.182 128.538 1.00 40.01 O
ATOM 11 C2' G A 108 49.448 0.301 127.548 1.00 42.54 C
ATOM 12 O2' G A 108 48.789 0.680 128.746 1.00 47.18 O
ATOM 13 C1' G A 108 50.734 1.114 127.358 1.00 43.20 C
ATOM 14 N9 G A 108 50.838 2.237 126.427 1.00 52.80 N
ATOM 15 C8 G A 108 51.346 3.477 126.737 1.00 53.64 C
ATOM 16 N7 G A 108 51.508 4.245 125.692 1.00 53.30 N
ATOM 17 C5 G A 108 51.043 3.487 124.630 1.00 52.40 C
ATOM 18 C6 G A 108 50.989 3.798 123.259 1.00 52.39 C
ATOM 19 O6 G A 108 51.353 4.827 122.686 1.00 53.82 O
ATOM 20 N1 G A 108 50.449 2.767 122.524 1.00 54.37 N
ATOM 21 C2 G A 108 50.013 1.584 123.038 1.00 56.16 C
ATOM 22 N2 G A 108 49.498 0.723 122.133 1.00 61.27 N
ATOM 23 N3 G A 108 50.066 1.264 124.328 1.00 52.89 N
ATOM 24 C4 G A 108 50.589 2.259 125.063 1.00 53.17 C
ATOM 25 P C A 109 50.199 -1.908 130.087 1.00 50.89 P
ATOM 26 OP1 C A 109 49.977 -3.180 130.805 1.00 54.24 O
ATOM 27 OP2 C A 109 49.447 -0.678 130.543 1.00 60.83 O
ATOM 28 O5' C A 109 51.763 -1.626 130.188 1.00 41.84 O
TER
ATOM 1 O3' C B 109 53.281 1.358 131.781 1.00 44.14 O
ATOM 2 P C B 110 52.744 2.744 131.184 1.00 52.29 P
ATOM 3 OP1 C B 110 52.186 3.575 132.289 1.00 48.20 O
ATOM 4 OP2 C B 110 51.885 2.399 130.014 1.00 50.47 O
ATOM 5 O5' C B 110 54.079 3.453 130.678 1.00 43.71 O
ATOM 6 C5' C B 110 54.978 4.045 131.619 1.00 47.29 C
ATOM 7 C4' C B 110 56.124 4.726 130.902 1.00 47.61 C
ATOM 8 O4' C B 110 56.838 3.739 130.120 1.00 51.20 O
ATOM 9 C3' C B 110 55.710 5.762 129.873 1.00 51.27 C
ATOM 10 O3' C B 110 55.484 7.040 130.459 1.00 48.83 O
ATOM 11 C2' C B 110 56.902 5.793 128.932 1.00 47.49 C
ATOM 12 O2' C B 110 57.958 6.556 129.476 1.00 52.06 O
ATOM 13 C1' C B 110 57.309 4.326 128.920 1.00 43.80 C
ATOM 14 N1 C B 110 56.843 3.527 127.780 1.00 36.05 N
ATOM 15 C2 C B 110 57.395 3.774 126.536 1.00 43.34 C
ATOM 16 O2 C B 110 58.219 4.688 126.427 1.00 47.48 O
ATOM 17 N3 C B 110 57.030 3.010 125.478 1.00 40.86 N
ATOM 18 C4 C B 110 56.154 2.030 125.642 1.00 42.29 C
ATOM 19 N4 C B 110 55.841 1.298 124.578 1.00 45.97 N
ATOM 20 C5 C B 110 55.559 1.757 126.908 1.00 35.02 C
ATOM 21 C6 C B 110 55.919 2.534 127.938 1.00 35.57 C
ATOM 22 P C B 111 54.479 8.058 129.727 1.00 53.79 P
ATOM 23 OP1 C B 111 54.501 9.355 130.453 1.00 58.72 O
ATOM 24 OP2 C B 111 53.177 7.339 129.555 1.00 48.42 O
ATOM 25 O5' C B 111 55.187 8.309 128.318 1.00 38.85 O
TER
ATOM 2 P G A 108 52.602 -3.060 123.931 1.00 43.53 P
ATOM 3 OP1 G A 108 51.522 -2.951 122.910 1.00 23.69 O
ATOM 4 OP2 G A 108 54.028 -3.114 123.483 1.00 39.85 O
ATOM 5 O5' G A 108 52.468 -1.842 124.932 1.00 40.53 O
ATOM 6 C5' G A 108 51.199 -1.505 125.435 1.00 37.78 C
ATOM 7 C4' G A 108 51.306 -1.114 126.874 1.00 39.56 C
ATOM 8 O4' G A 108 51.772 0.246 126.989 1.00 48.19 O
ATOM 9 C3' G A 108 49.990 -1.135 127.567 1.00 40.42 C
ATOM 10 O3' G A 108 49.880 -2.182 128.538 1.00 40.01 O
ATOM 11 C2' G A 108 49.448 0.301 127.548 1.00 42.54 C
ATOM 12 O2' G A 108 48.789 0.680 128.746 1.00 47.18 O
ATOM 13 C1' G A 108 50.734 1.114 127.358 1.00 43.20 C
ATOM 14 N9 G A 108 50.838 2.237 126.427 1.00 52.80 N
ATOM 15 C8 G A 108 51.346 3.477 126.737 1.00 53.64 C
ATOM 16 N7 G A 108 51.508 4.245 125.692 1.00 53.30 N
ATOM 17 C5 G A 108 51.043 3.487 124.630 1.00 52.40 C
ATOM 18 C6 G A 108 50.989 3.798 123.259 1.00 52.39 C
ATOM 19 O6 G A 108 51.353 4.827 122.686 1.00 53.82 O
ATOM 20 N1 G A 108 50.449 2.767 122.524 1.00 54.37 N
ATOM 21 C2 G A 108 50.013 1.584 123.038 1.00 56.16 C
ATOM 22 N2 G A 108 49.498 0.723 122.133 1.00 61.27 N
ATOM 23 N3 G A 108 50.066 1.264 124.328 1.00 52.89 N
ATOM 24 C4 G A 108 50.589 2.259 125.063 1.00 53.17 C
ATOM 25 P C A 109 50.199 -1.908 130.087 1.00 50.89 P
ATOM 26 OP1 C A 109 49.977 -3.180 130.805 1.00 54.24 O
ATOM 27 OP2 C A 109 49.447 -0.678 130.543 1.00 60.83 O
ATOM 28 O5' C A 109 51.763 -1.626 130.188 1.00 41.84 O
TER
ATOM 1 O3' C B 109 53.281 1.358 131.781 1.00 44.14 O
ATOM 2 P C B 110 52.744 2.744 131.184 1.00 52.29 P
ATOM 3 OP1 C B 110 52.186 3.575 132.289 1.00 48.20 O
ATOM 4 OP2 C B 110 51.885 2.399 130.014 1.00 50.47 O
ATOM 5 O5' C B 110 54.079 3.453 130.678 1.00 43.71 O
ATOM 6 C5' C B 110 54.978 4.045 131.619 1.00 47.29 C
ATOM 7 C4' C B 110 56.124 4.726 130.902 1.00 47.61 C
ATOM 8 O4' C B 110 56.838 3.739 130.120 1.00 51.20 O
ATOM 9 C3' C B 110 55.710 5.762 129.873 1.00 51.27 C
ATOM 10 O3' C B 110 55.484 7.040 130.459 1.00 48.83 O
ATOM 11 C2' C B 110 56.902 5.793 128.932 1.00 47.49 C
ATOM 12 O2' C B 110 57.958 6.556 129.476 1.00 52.06 O
ATOM 13 C1' C B 110 57.309 4.326 128.920 1.00 43.80 C
ATOM 14 N1 C B 110 56.843 3.527 127.780 1.00 36.05 N
ATOM 15 C2 C B 110 57.395 3.774 126.536 1.00 43.34 C
ATOM 16 O2 C B 110 58.219 4.688 126.427 1.00 47.48 O
ATOM 17 N3 C B 110 57.030 3.010 125.478 1.00 40.86 N
ATOM 18 C4 C B 110 56.154 2.030 125.642 1.00 42.29 C
ATOM 19 N4 C B 110 55.841 1.298 124.578 1.00 45.97 N
ATOM 20 C5 C B 110 55.559 1.757 126.908 1.00 35.02 C
ATOM 21 C6 C B 110 55.919 2.534 127.938 1.00 35.57 C
ATOM 22 P C B 111 54.479 8.058 129.727 1.00 53.79 P
ATOM 23 OP1 C B 111 54.501 9.355 130.453 1.00 58.72 O
ATOM 24 OP2 C B 111 53.177 7.339 129.555 1.00 48.42 O
ATOM 25 O5' C B 111 55.187 8.309 128.318 1.00 38.85 O
TER
Atoms:
OP1: (51.522,-2.951,122.910)
OP2: (54.028,-3.114,123.483)
C3': (49.990,-1.135,127.567)
C1': (50.734,1.114,127.358)
C5': (51.199,-1.505,125.435)
O6: (51.353,4.827,122.686)
O4': (51.772,0.246,126.989)
C8: (51.346,3.477,126.737)
C2: (50.013,1.584,123.038)
C6: (50.989,3.798,123.259)
C5: (51.043,3.487,124.630)
C4: (50.589,2.259,125.063)
P: (52.602,-3.060,123.931)
C4': (51.306,-1.114,126.874)
C2': (49.448,0.301,127.548)
O2': (48.789,0.680,128.746)
N1: (50.449,2.767,122.524)
N2: (49.498,0.723,122.133)
N3: (50.066,1.264,124.328)
N7: (51.508,4.245,125.692)
N9: (50.838,2.237,126.427)
O5': (52.468,-1.842,124.932)
O3': (49.880,-2.182,128.538)
OP2: (54.028,-3.114,123.483)
C3': (49.990,-1.135,127.567)
C1': (50.734,1.114,127.358)
C5': (51.199,-1.505,125.435)
O6: (51.353,4.827,122.686)
O4': (51.772,0.246,126.989)
C8: (51.346,3.477,126.737)
C2: (50.013,1.584,123.038)
C6: (50.989,3.798,123.259)
C5: (51.043,3.487,124.630)
C4: (50.589,2.259,125.063)
P: (52.602,-3.060,123.931)
C4': (51.306,-1.114,126.874)
C2': (49.448,0.301,127.548)
O2': (48.789,0.680,128.746)
N1: (50.449,2.767,122.524)
N2: (49.498,0.723,122.133)
N3: (50.066,1.264,124.328)
N7: (51.508,4.245,125.692)
N9: (50.838,2.237,126.427)
O5': (52.468,-1.842,124.932)
O3': (49.880,-2.182,128.538)
C2: (57.395,3.774,126.536)
OP1: (52.186,3.575,132.289)
OP2: (51.885,2.399,130.014)
C4: (56.154,2.030,125.642)
O5': (54.079,3.453,130.678)
C3': (55.710,5.762,129.873)
C1': (57.309,4.326,128.920)
O4': (56.838,3.739,130.120)
C5': (54.978,4.045,131.619)
P: (52.744,2.744,131.184)
O2: (58.219,4.688,126.427)
C4': (56.124,4.726,130.902)
C2': (56.902,5.793,128.932)
O2': (57.958,6.556,129.476)
N1: (56.843,3.527,127.780)
N3: (57.030,3.010,125.478)
N4: (55.841,1.298,124.578)
C6: (55.919,2.534,127.938)
C5: (55.559,1.757,126.908)
O3': (55.484,7.040,130.459)
OP1: (52.186,3.575,132.289)
OP2: (51.885,2.399,130.014)
C4: (56.154,2.030,125.642)
O5': (54.079,3.453,130.678)
C3': (55.710,5.762,129.873)
C1': (57.309,4.326,128.920)
O4': (56.838,3.739,130.120)
C5': (54.978,4.045,131.619)
P: (52.744,2.744,131.184)
O2: (58.219,4.688,126.427)
C4': (56.124,4.726,130.902)
C2': (56.902,5.793,128.932)
O2': (57.958,6.556,129.476)
N1: (56.843,3.527,127.780)
N3: (57.030,3.010,125.478)
N4: (55.841,1.298,124.578)
C6: (55.919,2.534,127.938)
C5: (55.559,1.757,126.908)
O3': (55.484,7.040,130.459)
Image (generated by PyMOL):