ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A44:A59

Extra

PDB:
ATOM 1 O3' C A 43 63.726 160.658 43.932 1.00 32.82 O
ATOM 2 P G A 44 62.311 161.418 43.856 1.00 33.45 P
ATOM 3 OP1 G A 44 62.256 162.372 44.977 1.00 31.81 O
ATOM 4 OP2 G A 44 61.245 160.387 43.721 1.00 32.81 O
ATOM 5 O5' G A 44 62.422 162.229 42.490 1.00 31.70 O
ATOM 6 C5' G A 44 61.255 162.678 41.792 1.00 33.92 C
ATOM 7 C4' G A 44 61.523 162.700 40.310 1.00 35.98 C
ATOM 8 O4' G A 44 62.005 161.404 39.881 1.00 36.81 O
ATOM 9 C3' G A 44 60.317 163.005 39.440 1.00 37.64 C
ATOM 10 O3' G A 44 60.201 164.409 39.256 1.00 37.58 O
ATOM 11 C2' G A 44 60.637 162.258 38.151 1.00 39.16 C
ATOM 12 O2' G A 44 61.563 162.943 37.337 1.00 42.50 O
ATOM 13 C1' G A 44 61.332 161.010 38.697 1.00 39.05 C
ATOM 14 N9 G A 44 60.430 159.923 39.058 1.00 40.52 N
ATOM 15 C8 G A 44 60.294 159.384 40.312 1.00 40.95 C
ATOM 16 N7 G A 44 59.442 158.402 40.358 1.00 43.05 N
ATOM 17 C5 G A 44 58.981 158.280 39.056 1.00 41.63 C
ATOM 18 C6 G A 44 58.052 157.373 38.505 1.00 40.98 C
ATOM 19 O6 G A 44 57.449 156.458 39.070 1.00 40.35 O
ATOM 20 N1 G A 44 57.853 157.605 37.152 1.00 39.86 N
ATOM 21 C2 G A 44 58.478 158.581 36.420 1.00 40.98 C
ATOM 22 N2 G A 44 58.133 158.654 35.129 1.00 41.88 N
ATOM 23 N3 G A 44 59.369 159.426 36.918 1.00 41.09 N
ATOM 24 C4 G A 44 59.569 159.220 38.238 1.00 41.09 C
ATOM 25 P U A 45 58.827 165.148 39.619 1.00 39.83 P
ATOM 26 OP1 U A 45 58.989 166.620 39.473 1.00 39.02 O
ATOM 27 OP2 U A 45 58.346 164.592 40.914 1.00 40.53 O
ATOM 28 O5' U A 45 57.845 164.666 38.468 1.00 39.26 O
TER

ATOM 1 O3' U B 58 56.041 163.914 26.972 1.00 37.22 O
ATOM 2 P A B 59 55.305 164.396 28.316 1.00 38.58 P
ATOM 3 OP1 A B 59 53.966 164.935 27.993 1.00 39.06 O
ATOM 4 OP2 A B 59 56.254 165.230 29.120 1.00 36.91 O
ATOM 5 O5' A B 59 55.011 163.022 29.050 1.00 37.28 O
ATOM 6 C5' A B 59 56.036 162.056 29.171 1.00 37.93 C
ATOM 7 C4' A B 59 55.609 160.939 30.085 1.00 37.77 C
ATOM 8 O4' A B 59 56.868 160.398 30.559 1.00 39.25 O
ATOM 9 C3' A B 59 54.821 161.332 31.344 1.00 38.13 C
ATOM 10 O3' A B 59 53.417 161.038 31.253 1.00 38.51 O
ATOM 11 C2' A B 59 55.489 160.502 32.429 1.00 39.10 C
ATOM 12 O2' A B 59 55.012 159.174 32.419 1.00 37.35 O
ATOM 13 C1' A B 59 56.944 160.531 31.961 1.00 41.19 C
ATOM 14 N9 A B 59 57.641 161.790 32.278 1.00 43.18 N
ATOM 15 C8 A B 59 57.402 163.055 31.794 1.00 42.35 C
ATOM 16 N7 A B 59 58.172 163.974 32.319 1.00 43.46 N
ATOM 17 C5 A B 59 58.977 163.273 33.207 1.00 43.00 C
ATOM 18 C6 A B 59 59.982 163.680 34.097 1.00 42.30 C
ATOM 19 N6 A B 59 60.364 164.945 34.263 1.00 42.71 N
ATOM 20 N1 A B 59 60.588 162.730 34.832 1.00 43.35 N
ATOM 21 C2 A B 59 60.201 161.462 34.687 1.00 43.94 C
ATOM 22 N3 A B 59 59.265 160.957 33.897 1.00 44.58 N
ATOM 23 C4 A B 59 58.677 161.927 33.176 1.00 43.75 C
ATOM 24 P A B 60 52.444 161.295 32.527 1.00 39.52 P
ATOM 25 OP1 A B 60 51.699 162.569 32.346 1.00 40.45 O
ATOM 26 OP2 A B 60 53.175 161.064 33.805 1.00 39.62 O
ATOM 27 O5' A B 60 51.354 160.145 32.393 1.00 39.40 O
TER

Atoms:
OP1: (62.256,162.372,44.977)
OP2: (61.245,160.387,43.721)
C3': (60.317,163.005,39.440)
C1': (61.332,161.010,38.697)
C5': (61.255,162.678,41.792)
O6: (57.449,156.458,39.070)
O4': (62.005,161.404,39.881)
C8: (60.294,159.384,40.312)
C2: (58.478,158.581,36.420)
C6: (58.052,157.373,38.505)
C5: (58.981,158.280,39.056)
C4: (59.569,159.220,38.238)
P: (62.311,161.418,43.856)
C4': (61.523,162.700,40.310)
C2': (60.637,162.258,38.151)
O2': (61.563,162.943,37.337)
N1: (57.853,157.605,37.152)
N2: (58.133,158.654,35.129)
N3: (59.369,159.426,36.918)
N7: (59.442,158.402,40.358)
N9: (60.430,159.923,39.058)
O5': (62.422,162.229,42.490)
O3': (60.201,164.409,39.256)
OP1: (53.966,164.935,27.993)
OP2: (56.254,165.230,29.120)
C3': (54.821,161.332,31.344)
C1': (56.944,160.531,31.961)
C5': (56.036,162.056,29.171)
O4': (56.868,160.398,30.559)
C8: (57.402,163.055,31.794)
O2': (55.012,159.174,32.419)
C6: (59.982,163.680,34.097)
C5: (58.977,163.273,33.207)
C4: (58.677,161.927,33.176)
P: (55.305,164.396,28.316)
C4': (55.609,160.939,30.085)
C2': (55.489,160.502,32.429)
C2: (60.201,161.462,34.687)
N1: (60.588,162.730,34.832)
N3: (59.265,160.957,33.897)
N6: (60.364,164.945,34.263)
N7: (58.172,163.974,32.319)
N9: (57.641,161.790,32.278)
O5': (55.011,163.022,29.050)
O3': (53.417,161.038,31.253)
Image (generated by PyMOL):
PyMOL image
show in jmol