ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01526:01590

Extra

PDB:
ATOM 1 O3' G A1525 85.427 194.954 80.991 1.00 72.81 O
ATOM 2 P G A1526 86.820 194.958 80.189 1.00 74.36 P
ATOM 3 OP1 G A1526 86.741 193.851 79.201 1.00 74.46 O
ATOM 4 OP2 G A1526 87.941 194.993 81.162 1.00 74.42 O
ATOM 5 O5' G A1526 86.815 196.347 79.408 1.00 72.74 O
ATOM 6 C5' G A1526 85.827 196.608 78.397 1.00 71.89 C
ATOM 7 C4' G A1526 86.028 197.975 77.794 1.00 70.16 C
ATOM 8 O4' G A1526 85.807 198.994 78.803 1.00 70.90 O
ATOM 9 C3' G A1526 87.412 198.291 77.258 1.00 68.27 C
ATOM 10 O3' G A1526 87.612 197.766 75.958 1.00 66.92 O
ATOM 11 C2' G A1526 87.388 199.810 77.234 1.00 69.22 C
ATOM 12 O2' G A1526 86.645 200.303 76.139 1.00 68.92 O
ATOM 13 C1' G A1526 86.638 200.112 78.531 1.00 69.52 C
ATOM 14 N9 G A1526 87.548 200.293 79.655 1.00 68.86 N
ATOM 15 C8 G A1526 87.843 199.389 80.648 1.00 69.03 C
ATOM 16 N7 G A1526 88.697 199.847 81.520 1.00 68.90 N
ATOM 17 C5 G A1526 88.982 201.130 81.077 1.00 68.94 C
ATOM 18 C6 G A1526 89.837 202.115 81.619 1.00 68.89 C
ATOM 19 O6 G A1526 90.542 202.048 82.634 1.00 69.56 O
ATOM 20 N1 G A1526 89.828 203.274 80.851 1.00 68.15 N
ATOM 21 C2 G A1526 89.095 203.456 79.704 1.00 68.25 C
ATOM 22 N2 G A1526 89.225 204.638 79.097 1.00 69.04 N
ATOM 23 N3 G A1526 88.294 202.544 79.189 1.00 68.23 N
ATOM 24 C4 G A1526 88.284 201.415 79.923 1.00 68.61 C
ATOM 25 P U A1527 89.106 197.518 75.425 1.00 67.52 P
ATOM 26 OP1 U A1527 89.024 197.023 74.023 1.00 67.47 O
ATOM 27 OP2 U A1527 89.817 196.708 76.457 1.00 66.30 O
ATOM 28 O5' U A1527 89.765 198.968 75.402 1.00 68.11 O
TER

ATOM 1 O3' A B1589 84.701 210.423 73.089 1.00 74.43 O
ATOM 2 P A B1590 86.147 210.409 72.383 1.00 73.55 P
ATOM 3 OP1 A B1590 86.564 211.814 72.175 1.00 74.02 O
ATOM 4 OP2 A B1590 86.101 209.485 71.230 1.00 73.59 O
ATOM 5 O5' A B1590 87.112 209.798 73.486 1.00 73.72 O
ATOM 6 C5' A B1590 87.538 210.581 74.610 1.00 75.79 C
ATOM 7 C4' A B1590 88.378 209.732 75.520 1.00 78.00 C
ATOM 8 O4' A B1590 87.558 208.633 76.001 1.00 79.25 O
ATOM 9 C3' A B1590 89.538 209.057 74.809 1.00 78.80 C
ATOM 10 O3' A B1590 90.687 209.887 74.737 1.00 78.46 O
ATOM 11 C2' A B1590 89.755 207.810 75.652 1.00 80.29 C
ATOM 12 O2' A B1590 90.488 208.052 76.835 1.00 81.95 O
ATOM 13 C1' A B1590 88.312 207.434 75.991 1.00 80.71 C
ATOM 14 N9 A B1590 87.728 206.540 74.989 1.00 82.51 N
ATOM 15 C8 A B1590 87.457 206.809 73.665 1.00 82.53 C
ATOM 16 N7 A B1590 86.955 205.792 73.010 1.00 82.59 N
ATOM 17 C5 A B1590 86.882 204.787 73.964 1.00 83.58 C
ATOM 18 C6 A B1590 86.441 203.461 73.899 1.00 84.20 C
ATOM 19 N6 A B1590 85.959 202.896 72.791 1.00 85.31 N
ATOM 20 N1 A B1590 86.510 202.721 75.026 1.00 84.81 N
ATOM 21 C2 A B1590 86.985 203.290 76.141 1.00 84.31 C
ATOM 22 N3 A B1590 87.424 204.527 76.330 1.00 84.00 N
ATOM 23 C4 A B1590 87.349 205.234 75.188 1.00 83.51 C
ATOM 24 P C B1591 91.357 210.203 73.311 1.00 80.01 P
ATOM 25 OP1 C B1591 92.676 210.829 73.582 1.00 78.88 O
ATOM 26 OP2 C B1591 90.353 210.931 72.499 1.00 80.78 O
ATOM 27 O5' C B1591 91.598 208.778 72.628 1.00 80.49 O
TER

Atoms:
OP1: (86.741,193.851,79.201)
OP2: (87.941,194.993,81.162)
C3': (87.412,198.291,77.258)
C1': (86.638,200.112,78.531)
C5': (85.827,196.608,78.397)
O6: (90.542,202.048,82.634)
O4': (85.807,198.994,78.803)
C8: (87.843,199.389,80.648)
C2: (89.095,203.456,79.704)
C6: (89.837,202.115,81.619)
C5: (88.982,201.130,81.077)
C4: (88.284,201.415,79.923)
P: (86.820,194.958,80.189)
C4': (86.028,197.975,77.794)
C2': (87.388,199.810,77.234)
O2': (86.645,200.303,76.139)
N1: (89.828,203.274,80.851)
N2: (89.225,204.638,79.097)
N3: (88.294,202.544,79.189)
N7: (88.697,199.847,81.520)
N9: (87.548,200.293,79.655)
O5': (86.815,196.347,79.408)
O3': (87.612,197.766,75.958)
OP1: (86.564,211.814,72.175)
OP2: (86.101,209.485,71.230)
C3': (89.538,209.057,74.809)
C1': (88.312,207.434,75.991)
C5': (87.538,210.581,74.610)
O4': (87.558,208.633,76.001)
C8: (87.457,206.809,73.665)
O2': (90.488,208.052,76.835)
C6: (86.441,203.461,73.899)
C5: (86.882,204.787,73.964)
C4: (87.349,205.234,75.188)
P: (86.147,210.409,72.383)
C4': (88.378,209.732,75.520)
C2': (89.755,207.810,75.652)
C2: (86.985,203.290,76.141)
N1: (86.510,202.721,75.026)
N3: (87.424,204.527,76.330)
N6: (85.959,202.896,72.791)
N7: (86.955,205.792,73.010)
N9: (87.728,206.540,74.989)
O5': (87.112,209.798,73.486)
O3': (90.687,209.887,74.737)
Image (generated by PyMOL):
PyMOL image
show in jmol