Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1598:A1599
Extra
PDB:
ATOM 1 O3' U A1597 107.611 183.580 85.033 1.00 56.42 O
ATOM 2 P C A1598 108.183 182.659 83.863 1.00 56.65 P
ATOM 3 OP1 C A1598 108.814 181.507 84.536 1.00 55.90 O
ATOM 4 OP2 C A1598 108.983 183.495 82.937 1.00 56.88 O
ATOM 5 O5' C A1598 106.867 182.200 83.095 1.00 57.63 O
ATOM 6 C5' C A1598 106.842 182.045 81.659 1.00 58.81 C
ATOM 7 C4' C A1598 105.540 182.579 81.118 1.00 61.35 C
ATOM 8 O4' C A1598 105.592 184.034 81.110 1.00 62.35 O
ATOM 9 C3' C A1598 105.195 182.231 79.680 1.00 62.06 C
ATOM 10 O3' C A1598 104.651 180.905 79.591 1.00 63.13 O
ATOM 11 C2' C A1598 104.163 183.312 79.357 1.00 62.22 C
ATOM 12 O2' C A1598 102.900 183.070 79.939 1.00 63.16 O
ATOM 13 C1' C A1598 104.766 184.528 80.064 1.00 61.61 C
ATOM 14 N1 C A1598 105.580 185.335 79.144 1.00 60.57 N
ATOM 15 C2 C A1598 104.947 186.311 78.358 1.00 60.84 C
ATOM 16 O2 C A1598 103.730 186.514 78.509 1.00 62.01 O
ATOM 17 N3 C A1598 105.675 187.004 77.458 1.00 59.79 N
ATOM 18 C4 C A1598 106.980 186.761 77.332 1.00 60.45 C
ATOM 19 N4 C A1598 107.651 187.439 76.409 1.00 61.21 N
ATOM 20 C5 C A1598 107.655 185.802 78.144 1.00 60.83 C
ATOM 21 C6 C A1598 106.924 185.122 79.029 1.00 60.30 C
ATOM 22 P A A1599 105.147 179.904 78.433 1.00 63.36 P
ATOM 23 OP1 A A1599 105.787 178.770 79.122 1.00 62.99 O
ATOM 24 OP2 A A1599 105.924 180.668 77.444 1.00 64.29 O
ATOM 25 O5' A A1599 103.791 179.390 77.763 1.00 65.12 O
TER
ATOM 1 O3' C B1598 104.651 180.905 79.591 1.00 63.13 O
ATOM 2 P A B1599 105.147 179.904 78.433 1.00 63.36 P
ATOM 3 OP1 A B1599 105.787 178.770 79.122 1.00 62.99 O
ATOM 4 OP2 A B1599 105.924 180.668 77.444 1.00 64.29 O
ATOM 5 O5' A B1599 103.791 179.390 77.763 1.00 65.12 O
ATOM 6 C5' A B1599 102.967 178.413 78.455 1.00 67.81 C
ATOM 7 C4' A B1599 101.637 178.170 77.743 1.00 69.17 C
ATOM 8 O4' A B1599 100.722 179.301 77.829 1.00 70.37 O
ATOM 9 C3' A B1599 101.632 177.912 76.250 1.00 67.97 C
ATOM 10 O3' A B1599 102.094 176.635 75.917 1.00 65.01 O
ATOM 11 C2' A B1599 100.146 177.960 75.962 1.00 69.54 C
ATOM 12 O2' A B1599 99.532 176.772 76.415 1.00 70.45 O
ATOM 13 C1' A B1599 99.718 179.151 76.826 1.00 71.11 C
ATOM 14 N9 A B1599 99.670 180.343 75.974 1.00 73.39 N
ATOM 15 C8 A B1599 100.519 181.426 75.868 1.00 74.52 C
ATOM 16 N7 A B1599 100.183 182.268 74.913 1.00 74.94 N
ATOM 17 C5 A B1599 99.039 181.705 74.357 1.00 75.46 C
ATOM 18 C6 A B1599 98.208 182.082 73.276 1.00 76.17 C
ATOM 19 N6 A B1599 98.411 183.152 72.499 1.00 76.71 N
ATOM 20 N1 A B1599 97.142 181.297 73.004 1.00 76.51 N
ATOM 21 C2 A B1599 96.933 180.208 73.751 1.00 75.58 C
ATOM 22 N3 A B1599 97.643 179.739 74.769 1.00 75.30 N
ATOM 23 C4 A B1599 98.695 180.540 75.023 1.00 74.89 C
ATOM 24 P A B1600 102.953 176.448 74.586 1.00 63.16 P
ATOM 25 OP1 A B1600 103.025 175.000 74.277 1.00 63.55 O
ATOM 26 OP2 A B1600 104.199 177.202 74.848 1.00 64.05 O
ATOM 27 O5' A B1600 102.101 177.184 73.456 1.00 61.29 O
TER
ATOM 2 P C A1598 108.183 182.659 83.863 1.00 56.65 P
ATOM 3 OP1 C A1598 108.814 181.507 84.536 1.00 55.90 O
ATOM 4 OP2 C A1598 108.983 183.495 82.937 1.00 56.88 O
ATOM 5 O5' C A1598 106.867 182.200 83.095 1.00 57.63 O
ATOM 6 C5' C A1598 106.842 182.045 81.659 1.00 58.81 C
ATOM 7 C4' C A1598 105.540 182.579 81.118 1.00 61.35 C
ATOM 8 O4' C A1598 105.592 184.034 81.110 1.00 62.35 O
ATOM 9 C3' C A1598 105.195 182.231 79.680 1.00 62.06 C
ATOM 10 O3' C A1598 104.651 180.905 79.591 1.00 63.13 O
ATOM 11 C2' C A1598 104.163 183.312 79.357 1.00 62.22 C
ATOM 12 O2' C A1598 102.900 183.070 79.939 1.00 63.16 O
ATOM 13 C1' C A1598 104.766 184.528 80.064 1.00 61.61 C
ATOM 14 N1 C A1598 105.580 185.335 79.144 1.00 60.57 N
ATOM 15 C2 C A1598 104.947 186.311 78.358 1.00 60.84 C
ATOM 16 O2 C A1598 103.730 186.514 78.509 1.00 62.01 O
ATOM 17 N3 C A1598 105.675 187.004 77.458 1.00 59.79 N
ATOM 18 C4 C A1598 106.980 186.761 77.332 1.00 60.45 C
ATOM 19 N4 C A1598 107.651 187.439 76.409 1.00 61.21 N
ATOM 20 C5 C A1598 107.655 185.802 78.144 1.00 60.83 C
ATOM 21 C6 C A1598 106.924 185.122 79.029 1.00 60.30 C
ATOM 22 P A A1599 105.147 179.904 78.433 1.00 63.36 P
ATOM 23 OP1 A A1599 105.787 178.770 79.122 1.00 62.99 O
ATOM 24 OP2 A A1599 105.924 180.668 77.444 1.00 64.29 O
ATOM 25 O5' A A1599 103.791 179.390 77.763 1.00 65.12 O
TER
ATOM 1 O3' C B1598 104.651 180.905 79.591 1.00 63.13 O
ATOM 2 P A B1599 105.147 179.904 78.433 1.00 63.36 P
ATOM 3 OP1 A B1599 105.787 178.770 79.122 1.00 62.99 O
ATOM 4 OP2 A B1599 105.924 180.668 77.444 1.00 64.29 O
ATOM 5 O5' A B1599 103.791 179.390 77.763 1.00 65.12 O
ATOM 6 C5' A B1599 102.967 178.413 78.455 1.00 67.81 C
ATOM 7 C4' A B1599 101.637 178.170 77.743 1.00 69.17 C
ATOM 8 O4' A B1599 100.722 179.301 77.829 1.00 70.37 O
ATOM 9 C3' A B1599 101.632 177.912 76.250 1.00 67.97 C
ATOM 10 O3' A B1599 102.094 176.635 75.917 1.00 65.01 O
ATOM 11 C2' A B1599 100.146 177.960 75.962 1.00 69.54 C
ATOM 12 O2' A B1599 99.532 176.772 76.415 1.00 70.45 O
ATOM 13 C1' A B1599 99.718 179.151 76.826 1.00 71.11 C
ATOM 14 N9 A B1599 99.670 180.343 75.974 1.00 73.39 N
ATOM 15 C8 A B1599 100.519 181.426 75.868 1.00 74.52 C
ATOM 16 N7 A B1599 100.183 182.268 74.913 1.00 74.94 N
ATOM 17 C5 A B1599 99.039 181.705 74.357 1.00 75.46 C
ATOM 18 C6 A B1599 98.208 182.082 73.276 1.00 76.17 C
ATOM 19 N6 A B1599 98.411 183.152 72.499 1.00 76.71 N
ATOM 20 N1 A B1599 97.142 181.297 73.004 1.00 76.51 N
ATOM 21 C2 A B1599 96.933 180.208 73.751 1.00 75.58 C
ATOM 22 N3 A B1599 97.643 179.739 74.769 1.00 75.30 N
ATOM 23 C4 A B1599 98.695 180.540 75.023 1.00 74.89 C
ATOM 24 P A B1600 102.953 176.448 74.586 1.00 63.16 P
ATOM 25 OP1 A B1600 103.025 175.000 74.277 1.00 63.55 O
ATOM 26 OP2 A B1600 104.199 177.202 74.848 1.00 64.05 O
ATOM 27 O5' A B1600 102.101 177.184 73.456 1.00 61.29 O
TER
Atoms:
C2: (104.947,186.311,78.358)
OP1: (108.814,181.507,84.536)
OP2: (108.983,183.495,82.937)
C4: (106.980,186.761,77.332)
O5': (106.867,182.200,83.095)
C3': (105.195,182.231,79.680)
C1': (104.766,184.528,80.064)
O4': (105.592,184.034,81.110)
C5': (106.842,182.045,81.659)
P: (108.183,182.659,83.863)
O2: (103.730,186.514,78.509)
C4': (105.540,182.579,81.118)
C2': (104.163,183.312,79.357)
O2': (102.900,183.070,79.939)
N1: (105.580,185.335,79.144)
N3: (105.675,187.004,77.458)
N4: (107.651,187.439,76.409)
C6: (106.924,185.122,79.029)
C5: (107.655,185.802,78.144)
O3': (104.651,180.905,79.591)
OP1: (108.814,181.507,84.536)
OP2: (108.983,183.495,82.937)
C4: (106.980,186.761,77.332)
O5': (106.867,182.200,83.095)
C3': (105.195,182.231,79.680)
C1': (104.766,184.528,80.064)
O4': (105.592,184.034,81.110)
C5': (106.842,182.045,81.659)
P: (108.183,182.659,83.863)
O2: (103.730,186.514,78.509)
C4': (105.540,182.579,81.118)
C2': (104.163,183.312,79.357)
O2': (102.900,183.070,79.939)
N1: (105.580,185.335,79.144)
N3: (105.675,187.004,77.458)
N4: (107.651,187.439,76.409)
C6: (106.924,185.122,79.029)
C5: (107.655,185.802,78.144)
O3': (104.651,180.905,79.591)
OP1: (105.787,178.770,79.122)
OP2: (105.924,180.668,77.444)
C3': (101.632,177.912,76.250)
C1': (99.718,179.151,76.826)
C5': (102.967,178.413,78.455)
O4': (100.722,179.301,77.829)
C8: (100.519,181.426,75.868)
O2': (99.532,176.772,76.415)
C6: (98.208,182.082,73.276)
C5: (99.039,181.705,74.357)
C4: (98.695,180.540,75.023)
P: (105.147,179.904,78.433)
C4': (101.637,178.170,77.743)
C2': (100.146,177.960,75.962)
C2: (96.933,180.208,73.751)
N1: (97.142,181.297,73.004)
N3: (97.643,179.739,74.769)
N6: (98.411,183.152,72.499)
N7: (100.183,182.268,74.913)
N9: (99.670,180.343,75.974)
O5': (103.791,179.390,77.763)
O3': (102.094,176.635,75.917)
OP2: (105.924,180.668,77.444)
C3': (101.632,177.912,76.250)
C1': (99.718,179.151,76.826)
C5': (102.967,178.413,78.455)
O4': (100.722,179.301,77.829)
C8: (100.519,181.426,75.868)
O2': (99.532,176.772,76.415)
C6: (98.208,182.082,73.276)
C5: (99.039,181.705,74.357)
C4: (98.695,180.540,75.023)
P: (105.147,179.904,78.433)
C4': (101.637,178.170,77.743)
C2': (100.146,177.960,75.962)
C2: (96.933,180.208,73.751)
N1: (97.142,181.297,73.004)
N3: (97.643,179.739,74.769)
N6: (98.411,183.152,72.499)
N7: (100.183,182.268,74.913)
N9: (99.670,180.343,75.974)
O5': (103.791,179.390,77.763)
O3': (102.094,176.635,75.917)
Image (generated by PyMOL):