Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01598:01599
Extra
PDB:
ATOM 1 O3' U A1597 107.852 183.628 84.608 1.00 55.12 O
ATOM 2 P C A1598 108.311 182.648 83.427 1.00 55.93 P
ATOM 3 OP1 C A1598 108.820 181.402 84.057 1.00 54.81 O
ATOM 4 OP2 C A1598 109.176 183.397 82.482 1.00 57.57 O
ATOM 5 O5' C A1598 106.942 182.328 82.684 1.00 56.90 O
ATOM 6 C5' C A1598 106.890 182.056 81.273 1.00 56.68 C
ATOM 7 C4' C A1598 105.593 182.575 80.716 1.00 57.51 C
ATOM 8 O4' C A1598 105.635 184.027 80.694 1.00 58.74 O
ATOM 9 C3' C A1598 105.256 182.209 79.286 1.00 58.31 C
ATOM 10 O3' C A1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 11 C2' C A1598 104.233 183.287 78.934 1.00 57.74 C
ATOM 12 O2' C A1598 102.956 183.062 79.498 1.00 56.22 O
ATOM 13 C1' C A1598 104.841 184.510 79.622 1.00 57.30 C
ATOM 14 N1 C A1598 105.696 185.297 78.719 1.00 56.90 N
ATOM 15 C2 C A1598 105.137 186.377 78.024 1.00 56.95 C
ATOM 16 O2 C A1598 103.952 186.679 78.230 1.00 57.25 O
ATOM 17 N3 C A1598 105.906 187.069 77.151 1.00 57.25 N
ATOM 18 C4 C A1598 107.185 186.730 76.972 1.00 58.13 C
ATOM 19 N4 C A1598 107.907 187.433 76.093 1.00 57.61 N
ATOM 20 C5 C A1598 107.784 185.654 77.686 1.00 58.71 C
ATOM 21 C6 C A1598 107.011 184.971 78.539 1.00 58.26 C
ATOM 22 P A A1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 23 OP1 A A1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 24 OP2 A A1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 25 O5' A A1599 103.884 179.366 77.395 1.00 63.36 O
TER
ATOM 1 O3' C B1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 2 P A B1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 3 OP1 A B1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 4 OP2 A B1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 5 O5' A B1599 103.884 179.366 77.395 1.00 63.36 O
ATOM 6 C5' A B1599 103.082 178.364 78.034 1.00 66.28 C
ATOM 7 C4' A B1599 101.773 178.147 77.308 1.00 66.73 C
ATOM 8 O4' A B1599 100.921 179.320 77.371 1.00 67.45 O
ATOM 9 C3' A B1599 101.775 177.884 75.817 1.00 65.25 C
ATOM 10 O3' A B1599 102.259 176.601 75.463 1.00 61.63 O
ATOM 11 C2' A B1599 100.281 177.966 75.546 1.00 67.61 C
ATOM 12 O2' A B1599 99.608 176.816 76.024 1.00 68.93 O
ATOM 13 C1' A B1599 99.885 179.166 76.414 1.00 68.60 C
ATOM 14 N9 A B1599 99.788 180.376 75.601 1.00 70.74 N
ATOM 15 C8 A B1599 100.603 181.478 75.567 1.00 71.93 C
ATOM 16 N7 A B1599 100.242 182.374 74.680 1.00 73.78 N
ATOM 17 C5 A B1599 99.109 181.826 74.094 1.00 74.61 C
ATOM 18 C6 A B1599 98.251 182.278 73.066 1.00 75.78 C
ATOM 19 N6 A B1599 98.394 183.445 72.429 1.00 76.43 N
ATOM 20 N1 A B1599 97.222 181.477 72.713 1.00 75.60 N
ATOM 21 C2 A B1599 97.065 180.318 73.357 1.00 74.70 C
ATOM 22 N3 A B1599 97.793 179.791 74.336 1.00 74.11 N
ATOM 23 C4 A B1599 98.814 180.602 74.659 1.00 73.21 C
ATOM 24 P A B1600 103.007 176.401 74.058 1.00 59.74 P
ATOM 25 OP1 A B1600 102.867 174.983 73.680 1.00 62.70 O
ATOM 26 OP2 A B1600 104.356 176.990 74.164 1.00 61.35 O
ATOM 27 O5' A B1600 102.151 177.255 73.026 1.00 57.71 O
TER
ATOM 2 P C A1598 108.311 182.648 83.427 1.00 55.93 P
ATOM 3 OP1 C A1598 108.820 181.402 84.057 1.00 54.81 O
ATOM 4 OP2 C A1598 109.176 183.397 82.482 1.00 57.57 O
ATOM 5 O5' C A1598 106.942 182.328 82.684 1.00 56.90 O
ATOM 6 C5' C A1598 106.890 182.056 81.273 1.00 56.68 C
ATOM 7 C4' C A1598 105.593 182.575 80.716 1.00 57.51 C
ATOM 8 O4' C A1598 105.635 184.027 80.694 1.00 58.74 O
ATOM 9 C3' C A1598 105.256 182.209 79.286 1.00 58.31 C
ATOM 10 O3' C A1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 11 C2' C A1598 104.233 183.287 78.934 1.00 57.74 C
ATOM 12 O2' C A1598 102.956 183.062 79.498 1.00 56.22 O
ATOM 13 C1' C A1598 104.841 184.510 79.622 1.00 57.30 C
ATOM 14 N1 C A1598 105.696 185.297 78.719 1.00 56.90 N
ATOM 15 C2 C A1598 105.137 186.377 78.024 1.00 56.95 C
ATOM 16 O2 C A1598 103.952 186.679 78.230 1.00 57.25 O
ATOM 17 N3 C A1598 105.906 187.069 77.151 1.00 57.25 N
ATOM 18 C4 C A1598 107.185 186.730 76.972 1.00 58.13 C
ATOM 19 N4 C A1598 107.907 187.433 76.093 1.00 57.61 N
ATOM 20 C5 C A1598 107.784 185.654 77.686 1.00 58.71 C
ATOM 21 C6 C A1598 107.011 184.971 78.539 1.00 58.26 C
ATOM 22 P A A1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 23 OP1 A A1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 24 OP2 A A1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 25 O5' A A1599 103.884 179.366 77.395 1.00 63.36 O
TER
ATOM 1 O3' C B1598 104.714 180.891 79.220 1.00 60.39 O
ATOM 2 P A B1599 105.229 179.858 78.094 1.00 62.33 P
ATOM 3 OP1 A B1599 105.820 178.710 78.823 1.00 61.25 O
ATOM 4 OP2 A B1599 106.033 180.550 77.071 1.00 63.89 O
ATOM 5 O5' A B1599 103.884 179.366 77.395 1.00 63.36 O
ATOM 6 C5' A B1599 103.082 178.364 78.034 1.00 66.28 C
ATOM 7 C4' A B1599 101.773 178.147 77.308 1.00 66.73 C
ATOM 8 O4' A B1599 100.921 179.320 77.371 1.00 67.45 O
ATOM 9 C3' A B1599 101.775 177.884 75.817 1.00 65.25 C
ATOM 10 O3' A B1599 102.259 176.601 75.463 1.00 61.63 O
ATOM 11 C2' A B1599 100.281 177.966 75.546 1.00 67.61 C
ATOM 12 O2' A B1599 99.608 176.816 76.024 1.00 68.93 O
ATOM 13 C1' A B1599 99.885 179.166 76.414 1.00 68.60 C
ATOM 14 N9 A B1599 99.788 180.376 75.601 1.00 70.74 N
ATOM 15 C8 A B1599 100.603 181.478 75.567 1.00 71.93 C
ATOM 16 N7 A B1599 100.242 182.374 74.680 1.00 73.78 N
ATOM 17 C5 A B1599 99.109 181.826 74.094 1.00 74.61 C
ATOM 18 C6 A B1599 98.251 182.278 73.066 1.00 75.78 C
ATOM 19 N6 A B1599 98.394 183.445 72.429 1.00 76.43 N
ATOM 20 N1 A B1599 97.222 181.477 72.713 1.00 75.60 N
ATOM 21 C2 A B1599 97.065 180.318 73.357 1.00 74.70 C
ATOM 22 N3 A B1599 97.793 179.791 74.336 1.00 74.11 N
ATOM 23 C4 A B1599 98.814 180.602 74.659 1.00 73.21 C
ATOM 24 P A B1600 103.007 176.401 74.058 1.00 59.74 P
ATOM 25 OP1 A B1600 102.867 174.983 73.680 1.00 62.70 O
ATOM 26 OP2 A B1600 104.356 176.990 74.164 1.00 61.35 O
ATOM 27 O5' A B1600 102.151 177.255 73.026 1.00 57.71 O
TER
Atoms:
C2: (105.137,186.377,78.024)
OP1: (108.820,181.402,84.057)
OP2: (109.176,183.397,82.482)
C4: (107.185,186.730,76.972)
O5': (106.942,182.328,82.684)
C3': (105.256,182.209,79.286)
C1': (104.841,184.510,79.622)
O4': (105.635,184.027,80.694)
C5': (106.890,182.056,81.273)
P: (108.311,182.648,83.427)
O2: (103.952,186.679,78.230)
C4': (105.593,182.575,80.716)
C2': (104.233,183.287,78.934)
O2': (102.956,183.062,79.498)
N1: (105.696,185.297,78.719)
N3: (105.906,187.069,77.151)
N4: (107.907,187.433,76.093)
C6: (107.011,184.971,78.539)
C5: (107.784,185.654,77.686)
O3': (104.714,180.891,79.220)
OP1: (108.820,181.402,84.057)
OP2: (109.176,183.397,82.482)
C4: (107.185,186.730,76.972)
O5': (106.942,182.328,82.684)
C3': (105.256,182.209,79.286)
C1': (104.841,184.510,79.622)
O4': (105.635,184.027,80.694)
C5': (106.890,182.056,81.273)
P: (108.311,182.648,83.427)
O2: (103.952,186.679,78.230)
C4': (105.593,182.575,80.716)
C2': (104.233,183.287,78.934)
O2': (102.956,183.062,79.498)
N1: (105.696,185.297,78.719)
N3: (105.906,187.069,77.151)
N4: (107.907,187.433,76.093)
C6: (107.011,184.971,78.539)
C5: (107.784,185.654,77.686)
O3': (104.714,180.891,79.220)
OP1: (105.820,178.710,78.823)
OP2: (106.033,180.550,77.071)
C3': (101.775,177.884,75.817)
C1': (99.885,179.166,76.414)
C5': (103.082,178.364,78.034)
O4': (100.921,179.320,77.371)
C8: (100.603,181.478,75.567)
O2': (99.608,176.816,76.024)
C6: (98.251,182.278,73.066)
C5: (99.109,181.826,74.094)
C4: (98.814,180.602,74.659)
P: (105.229,179.858,78.094)
C4': (101.773,178.147,77.308)
C2': (100.281,177.966,75.546)
C2: (97.065,180.318,73.357)
N1: (97.222,181.477,72.713)
N3: (97.793,179.791,74.336)
N6: (98.394,183.445,72.429)
N7: (100.242,182.374,74.680)
N9: (99.788,180.376,75.601)
O5': (103.884,179.366,77.395)
O3': (102.259,176.601,75.463)
OP2: (106.033,180.550,77.071)
C3': (101.775,177.884,75.817)
C1': (99.885,179.166,76.414)
C5': (103.082,178.364,78.034)
O4': (100.921,179.320,77.371)
C8: (100.603,181.478,75.567)
O2': (99.608,176.816,76.024)
C6: (98.251,182.278,73.066)
C5: (99.109,181.826,74.094)
C4: (98.814,180.602,74.659)
P: (105.229,179.858,78.094)
C4': (101.773,178.147,77.308)
C2': (100.281,177.966,75.546)
C2: (97.065,180.318,73.357)
N1: (97.222,181.477,72.713)
N3: (97.793,179.791,74.336)
N6: (98.394,183.445,72.429)
N7: (100.242,182.374,74.680)
N9: (99.788,180.376,75.601)
O5': (103.884,179.366,77.395)
O3': (102.259,176.601,75.463)
Image (generated by PyMOL):