ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2R8S:R109:R82

Extra

PDB:
ATOM 1 O3' C A 108 62.060 -24.814 15.604 1.00 45.76 O
ATOM 2 P G A 109 63.482 -25.425 15.205 1.00 44.97 P
ATOM 3 OP1 G A 109 64.407 -24.301 14.999 1.00 43.65 O
ATOM 4 OP2 G A 109 63.295 -26.466 14.177 1.00 41.67 O
ATOM 5 O5' G A 109 63.885 -26.182 16.562 1.00 41.38 O
ATOM 6 C5' G A 109 64.110 -25.417 17.738 1.00 43.65 C
ATOM 7 C4' G A 109 64.275 -26.318 18.940 1.00 40.27 C
ATOM 8 O4' G A 109 63.092 -27.138 19.099 1.00 38.85 O
ATOM 9 C3' G A 109 65.406 -27.324 18.831 1.00 41.49 C
ATOM 10 O3' G A 109 66.633 -26.720 19.190 1.00 41.76 O
ATOM 11 C2' G A 109 64.934 -28.366 19.831 1.00 38.65 C
ATOM 12 O2' G A 109 65.044 -27.911 21.151 1.00 37.96 O
ATOM 13 C1' G A 109 63.466 -28.454 19.462 1.00 37.09 C
ATOM 14 N9 G A 109 63.157 -29.417 18.398 1.00 34.66 N
ATOM 15 C8 G A 109 62.734 -29.188 17.106 1.00 34.44 C
ATOM 16 N7 G A 109 62.535 -30.288 16.428 1.00 32.72 N
ATOM 17 C5 G A 109 62.822 -31.307 17.321 1.00 31.66 C
ATOM 18 C6 G A 109 62.800 -32.711 17.162 1.00 35.29 C
ATOM 19 O6 G A 109 62.487 -33.385 16.172 1.00 35.12 O
ATOM 20 N1 G A 109 63.202 -33.384 18.310 1.00 33.88 N
ATOM 21 C2 G A 109 63.556 -32.768 19.488 1.00 36.17 C
ATOM 22 N2 G A 109 63.910 -33.597 20.482 1.00 32.69 N
ATOM 23 N3 G A 109 63.591 -31.451 19.660 1.00 32.83 N
ATOM 24 C4 G A 109 63.215 -30.785 18.536 1.00 33.81 C
ATOM 25 P C A 110 68.007 -27.321 18.649 1.00 41.93 P
ATOM 26 OP1 C A 110 69.088 -26.421 19.076 1.00 43.30 O
ATOM 27 OP2 C A 110 67.841 -27.684 17.230 1.00 42.71 O
ATOM 28 O5' C A 110 68.165 -28.673 19.477 1.00 43.70 O
TER

ATOM 1 O3' A B 81 66.409 -34.604 28.814 1.00 32.30 O
ATOM 2 P A B 82 67.817 -35.059 28.263 1.00 32.85 P
ATOM 3 OP1 A B 82 68.291 -36.203 29.011 1.00 31.81 O
ATOM 4 OP2 A B 82 68.650 -33.910 27.931 1.00 33.24 O
ATOM 5 O5' A B 82 67.482 -35.677 26.848 1.00 34.69 O
ATOM 6 C5' A B 82 66.596 -36.733 26.659 1.00 34.36 C
ATOM 7 C4' A B 82 66.205 -36.613 25.216 1.00 32.91 C
ATOM 8 O4' A B 82 65.491 -35.362 25.056 1.00 36.41 O
ATOM 9 C3' A B 82 67.399 -36.499 24.295 1.00 34.48 C
ATOM 10 O3' A B 82 67.869 -37.791 23.956 1.00 38.68 O
ATOM 11 C2' A B 82 66.812 -35.722 23.135 1.00 33.85 C
ATOM 12 O2' A B 82 66.085 -36.557 22.258 1.00 36.90 O
ATOM 13 C1' A B 82 65.851 -34.757 23.830 1.00 32.95 C
ATOM 14 N9 A B 82 66.370 -33.431 24.130 1.00 32.26 N
ATOM 15 C8 A B 82 67.414 -33.119 24.955 1.00 33.31 C
ATOM 16 N7 A B 82 67.630 -31.833 25.059 1.00 33.45 N
ATOM 17 C5 A B 82 66.680 -31.271 24.232 1.00 32.32 C
ATOM 18 C6 A B 82 66.405 -29.931 23.890 1.00 34.12 C
ATOM 19 N6 A B 82 67.103 -28.904 24.380 1.00 32.52 N
ATOM 20 N1 A B 82 65.390 -29.696 23.029 1.00 32.87 N
ATOM 21 C2 A B 82 64.706 -30.741 22.558 1.00 30.90 C
ATOM 22 N3 A B 82 64.876 -32.037 22.809 1.00 34.30 N
ATOM 23 C4 A B 82 65.891 -32.235 23.663 1.00 31.36 C
ATOM 24 P U B 83 69.422 -38.022 23.656 1.00 36.33 P
ATOM 25 OP1 U B 83 69.764 -37.263 22.428 1.00 38.69 O
ATOM 26 OP2 U B 83 69.658 -39.474 23.769 1.00 41.66 O
ATOM 27 O5' U B 83 70.197 -37.326 24.867 1.00 37.21 O
TER

Atoms:
OP1: (64.407,-24.301,14.999)
OP2: (63.295,-26.466,14.177)
C3': (65.406,-27.324,18.831)
C1': (63.466,-28.454,19.462)
C5': (64.110,-25.417,17.738)
O6: (62.487,-33.385,16.172)
O4': (63.092,-27.138,19.099)
C8: (62.734,-29.188,17.106)
C2: (63.556,-32.768,19.488)
C6: (62.800,-32.711,17.162)
C5: (62.822,-31.307,17.321)
C4: (63.215,-30.785,18.536)
P: (63.482,-25.425,15.205)
C4': (64.275,-26.318,18.940)
C2': (64.934,-28.366,19.831)
O2': (65.044,-27.911,21.151)
N1: (63.202,-33.384,18.310)
N2: (63.910,-33.597,20.482)
N3: (63.591,-31.451,19.660)
N7: (62.535,-30.288,16.428)
N9: (63.157,-29.417,18.398)
O5': (63.885,-26.182,16.562)
O3': (66.633,-26.720,19.190)
OP1: (68.291,-36.203,29.011)
OP2: (68.650,-33.910,27.931)
C3': (67.399,-36.499,24.295)
C1': (65.851,-34.757,23.830)
C5': (66.596,-36.733,26.659)
O4': (65.491,-35.362,25.056)
C8: (67.414,-33.119,24.955)
O2': (66.085,-36.557,22.258)
C6: (66.405,-29.931,23.890)
C5: (66.680,-31.271,24.232)
C4: (65.891,-32.235,23.663)
P: (67.817,-35.059,28.263)
C4': (66.205,-36.613,25.216)
C2': (66.812,-35.722,23.135)
C2: (64.706,-30.741,22.558)
N1: (65.390,-29.696,23.029)
N3: (64.876,-32.037,22.809)
N6: (67.103,-28.904,24.380)
N7: (67.630,-31.833,25.059)
N9: (66.370,-33.431,24.130)
O5': (67.482,-35.677,26.848)
O3': (67.869,-37.791,23.956)
Image (generated by PyMOL):
PyMOL image
show in jmol