Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0219:0654
Extra
PDB:
ATOM 1 O3' C A 218 53.610 91.444 23.336 1.00 42.80 O
ATOM 2 P G A 219 53.068 92.554 22.311 1.00 44.73 P
ATOM 3 OP1 G A 219 52.250 91.828 21.318 1.00 47.18 O
ATOM 4 OP2 G A 219 54.202 93.396 21.858 1.00 44.53 O
ATOM 5 O5' G A 219 52.074 93.442 23.175 1.00 40.88 O
ATOM 6 C5' G A 219 50.861 92.883 23.690 1.00 40.61 C
ATOM 7 C4' G A 219 50.104 93.922 24.471 1.00 40.47 C
ATOM 8 O4' G A 219 50.835 94.257 25.676 1.00 39.31 O
ATOM 9 C3' G A 219 49.951 95.249 23.760 1.00 40.28 C
ATOM 10 O3' G A 219 48.886 95.230 22.822 1.00 43.02 O
ATOM 11 C2' G A 219 49.727 96.213 24.913 1.00 38.33 C
ATOM 12 O2' G A 219 48.411 96.175 25.412 1.00 35.93 O
ATOM 13 C1' G A 219 50.674 95.636 25.961 1.00 37.73 C
ATOM 14 N9 G A 219 51.993 96.262 25.970 1.00 37.65 N
ATOM 15 C8 G A 219 53.164 95.759 25.453 1.00 36.01 C
ATOM 16 N7 G A 219 54.194 96.527 25.676 1.00 35.75 N
ATOM 17 C5 G A 219 53.672 97.612 26.371 1.00 37.67 C
ATOM 18 C6 G A 219 54.313 98.771 26.903 1.00 36.78 C
ATOM 19 O6 G A 219 55.510 99.080 26.866 1.00 37.53 O
ATOM 20 N1 G A 219 53.402 99.614 27.531 1.00 34.57 N
ATOM 21 C2 G A 219 52.054 99.383 27.633 1.00 35.19 C
ATOM 22 N2 G A 219 51.338 100.325 28.262 1.00 36.55 N
ATOM 23 N3 G A 219 51.448 98.311 27.154 1.00 35.55 N
ATOM 24 C4 G A 219 52.311 97.472 26.542 1.00 37.39 C
ATOM 25 P A A 220 48.821 96.360 21.683 1.00 44.48 P
ATOM 26 OP1 A A 220 47.546 96.192 20.938 1.00 43.64 O
ATOM 27 OP2 A A 220 50.120 96.361 20.951 1.00 40.07 O
ATOM 28 O5' A A 220 48.691 97.695 22.538 1.00 43.90 O
TER
ATOM 1 O3' A B 653 45.123 101.432 34.213 1.00 35.98 O
ATOM 2 P A B 654 44.540 102.672 33.392 1.00 38.42 P
ATOM 3 OP1 A B 654 44.424 103.798 34.355 1.00 35.56 O
ATOM 4 OP2 A B 654 43.343 102.232 32.633 1.00 37.48 O
ATOM 5 O5' A B 654 45.704 103.000 32.354 1.00 38.42 O
ATOM 6 C5' A B 654 46.975 103.497 32.812 1.00 35.49 C
ATOM 7 C4' A B 654 48.034 103.284 31.758 1.00 36.13 C
ATOM 8 O4' A B 654 48.145 101.866 31.469 1.00 35.09 O
ATOM 9 C3' A B 654 47.767 103.914 30.400 1.00 34.82 C
ATOM 10 O3' A B 654 48.121 105.281 30.369 1.00 34.41 O
ATOM 11 C2' A B 654 48.650 103.079 29.488 1.00 35.05 C
ATOM 12 O2' A B 654 50.014 103.441 29.567 1.00 33.59 O
ATOM 13 C1' A B 654 48.452 101.686 30.094 1.00 35.96 C
ATOM 14 N9 A B 654 47.335 100.976 29.468 1.00 35.43 N
ATOM 15 C8 A B 654 46.006 101.032 29.804 1.00 33.48 C
ATOM 16 N7 A B 654 45.239 100.298 29.040 1.00 33.80 N
ATOM 17 C5 A B 654 46.119 99.715 28.144 1.00 34.19 C
ATOM 18 C6 A B 654 45.924 98.832 27.072 1.00 34.77 C
ATOM 19 N6 A B 654 44.729 98.369 26.710 1.00 36.74 N
ATOM 20 N1 A B 654 47.012 98.436 26.376 1.00 34.04 N
ATOM 21 C2 A B 654 48.210 98.908 26.741 1.00 35.61 C
ATOM 22 N3 A B 654 48.520 99.747 27.728 1.00 35.19 N
ATOM 23 C4 A B 654 47.415 100.117 28.399 1.00 34.79 C
ATOM 24 P C B 655 47.099 106.357 29.751 1.00 37.24 P
ATOM 25 OP1 C B 655 47.856 107.631 29.659 1.00 38.24 O
ATOM 26 OP2 C B 655 45.815 106.319 30.497 1.00 33.98 O
ATOM 27 O5' C B 655 46.828 105.842 28.272 1.00 36.55 O
TER
ATOM 2 P G A 219 53.068 92.554 22.311 1.00 44.73 P
ATOM 3 OP1 G A 219 52.250 91.828 21.318 1.00 47.18 O
ATOM 4 OP2 G A 219 54.202 93.396 21.858 1.00 44.53 O
ATOM 5 O5' G A 219 52.074 93.442 23.175 1.00 40.88 O
ATOM 6 C5' G A 219 50.861 92.883 23.690 1.00 40.61 C
ATOM 7 C4' G A 219 50.104 93.922 24.471 1.00 40.47 C
ATOM 8 O4' G A 219 50.835 94.257 25.676 1.00 39.31 O
ATOM 9 C3' G A 219 49.951 95.249 23.760 1.00 40.28 C
ATOM 10 O3' G A 219 48.886 95.230 22.822 1.00 43.02 O
ATOM 11 C2' G A 219 49.727 96.213 24.913 1.00 38.33 C
ATOM 12 O2' G A 219 48.411 96.175 25.412 1.00 35.93 O
ATOM 13 C1' G A 219 50.674 95.636 25.961 1.00 37.73 C
ATOM 14 N9 G A 219 51.993 96.262 25.970 1.00 37.65 N
ATOM 15 C8 G A 219 53.164 95.759 25.453 1.00 36.01 C
ATOM 16 N7 G A 219 54.194 96.527 25.676 1.00 35.75 N
ATOM 17 C5 G A 219 53.672 97.612 26.371 1.00 37.67 C
ATOM 18 C6 G A 219 54.313 98.771 26.903 1.00 36.78 C
ATOM 19 O6 G A 219 55.510 99.080 26.866 1.00 37.53 O
ATOM 20 N1 G A 219 53.402 99.614 27.531 1.00 34.57 N
ATOM 21 C2 G A 219 52.054 99.383 27.633 1.00 35.19 C
ATOM 22 N2 G A 219 51.338 100.325 28.262 1.00 36.55 N
ATOM 23 N3 G A 219 51.448 98.311 27.154 1.00 35.55 N
ATOM 24 C4 G A 219 52.311 97.472 26.542 1.00 37.39 C
ATOM 25 P A A 220 48.821 96.360 21.683 1.00 44.48 P
ATOM 26 OP1 A A 220 47.546 96.192 20.938 1.00 43.64 O
ATOM 27 OP2 A A 220 50.120 96.361 20.951 1.00 40.07 O
ATOM 28 O5' A A 220 48.691 97.695 22.538 1.00 43.90 O
TER
ATOM 1 O3' A B 653 45.123 101.432 34.213 1.00 35.98 O
ATOM 2 P A B 654 44.540 102.672 33.392 1.00 38.42 P
ATOM 3 OP1 A B 654 44.424 103.798 34.355 1.00 35.56 O
ATOM 4 OP2 A B 654 43.343 102.232 32.633 1.00 37.48 O
ATOM 5 O5' A B 654 45.704 103.000 32.354 1.00 38.42 O
ATOM 6 C5' A B 654 46.975 103.497 32.812 1.00 35.49 C
ATOM 7 C4' A B 654 48.034 103.284 31.758 1.00 36.13 C
ATOM 8 O4' A B 654 48.145 101.866 31.469 1.00 35.09 O
ATOM 9 C3' A B 654 47.767 103.914 30.400 1.00 34.82 C
ATOM 10 O3' A B 654 48.121 105.281 30.369 1.00 34.41 O
ATOM 11 C2' A B 654 48.650 103.079 29.488 1.00 35.05 C
ATOM 12 O2' A B 654 50.014 103.441 29.567 1.00 33.59 O
ATOM 13 C1' A B 654 48.452 101.686 30.094 1.00 35.96 C
ATOM 14 N9 A B 654 47.335 100.976 29.468 1.00 35.43 N
ATOM 15 C8 A B 654 46.006 101.032 29.804 1.00 33.48 C
ATOM 16 N7 A B 654 45.239 100.298 29.040 1.00 33.80 N
ATOM 17 C5 A B 654 46.119 99.715 28.144 1.00 34.19 C
ATOM 18 C6 A B 654 45.924 98.832 27.072 1.00 34.77 C
ATOM 19 N6 A B 654 44.729 98.369 26.710 1.00 36.74 N
ATOM 20 N1 A B 654 47.012 98.436 26.376 1.00 34.04 N
ATOM 21 C2 A B 654 48.210 98.908 26.741 1.00 35.61 C
ATOM 22 N3 A B 654 48.520 99.747 27.728 1.00 35.19 N
ATOM 23 C4 A B 654 47.415 100.117 28.399 1.00 34.79 C
ATOM 24 P C B 655 47.099 106.357 29.751 1.00 37.24 P
ATOM 25 OP1 C B 655 47.856 107.631 29.659 1.00 38.24 O
ATOM 26 OP2 C B 655 45.815 106.319 30.497 1.00 33.98 O
ATOM 27 O5' C B 655 46.828 105.842 28.272 1.00 36.55 O
TER
Atoms:
OP1: (52.250,91.828,21.318)
OP2: (54.202,93.396,21.858)
C3': (49.951,95.249,23.760)
C1': (50.674,95.636,25.961)
C5': (50.861,92.883,23.690)
O6: (55.510,99.080,26.866)
O4': (50.835,94.257,25.676)
C8: (53.164,95.759,25.453)
C2: (52.054,99.383,27.633)
C6: (54.313,98.771,26.903)
C5: (53.672,97.612,26.371)
C4: (52.311,97.472,26.542)
P: (53.068,92.554,22.311)
C4': (50.104,93.922,24.471)
C2': (49.727,96.213,24.913)
O2': (48.411,96.175,25.412)
N1: (53.402,99.614,27.531)
N2: (51.338,100.325,28.262)
N3: (51.448,98.311,27.154)
N7: (54.194,96.527,25.676)
N9: (51.993,96.262,25.970)
O5': (52.074,93.442,23.175)
O3': (48.886,95.230,22.822)
OP2: (54.202,93.396,21.858)
C3': (49.951,95.249,23.760)
C1': (50.674,95.636,25.961)
C5': (50.861,92.883,23.690)
O6: (55.510,99.080,26.866)
O4': (50.835,94.257,25.676)
C8: (53.164,95.759,25.453)
C2: (52.054,99.383,27.633)
C6: (54.313,98.771,26.903)
C5: (53.672,97.612,26.371)
C4: (52.311,97.472,26.542)
P: (53.068,92.554,22.311)
C4': (50.104,93.922,24.471)
C2': (49.727,96.213,24.913)
O2': (48.411,96.175,25.412)
N1: (53.402,99.614,27.531)
N2: (51.338,100.325,28.262)
N3: (51.448,98.311,27.154)
N7: (54.194,96.527,25.676)
N9: (51.993,96.262,25.970)
O5': (52.074,93.442,23.175)
O3': (48.886,95.230,22.822)
OP1: (44.424,103.798,34.355)
OP2: (43.343,102.232,32.633)
C3': (47.767,103.914,30.400)
C1': (48.452,101.686,30.094)
C5': (46.975,103.497,32.812)
O4': (48.145,101.866,31.469)
C8: (46.006,101.032,29.804)
O2': (50.014,103.441,29.567)
C6: (45.924,98.832,27.072)
C5: (46.119,99.715,28.144)
C4: (47.415,100.117,28.399)
P: (44.540,102.672,33.392)
C4': (48.034,103.284,31.758)
C2': (48.650,103.079,29.488)
C2: (48.210,98.908,26.741)
N1: (47.012,98.436,26.376)
N3: (48.520,99.747,27.728)
N6: (44.729,98.369,26.710)
N7: (45.239,100.298,29.040)
N9: (47.335,100.976,29.468)
O5': (45.704,103.000,32.354)
O3': (48.121,105.281,30.369)
OP2: (43.343,102.232,32.633)
C3': (47.767,103.914,30.400)
C1': (48.452,101.686,30.094)
C5': (46.975,103.497,32.812)
O4': (48.145,101.866,31.469)
C8: (46.006,101.032,29.804)
O2': (50.014,103.441,29.567)
C6: (45.924,98.832,27.072)
C5: (46.119,99.715,28.144)
C4: (47.415,100.117,28.399)
P: (44.540,102.672,33.392)
C4': (48.034,103.284,31.758)
C2': (48.650,103.079,29.488)
C2: (48.210,98.908,26.741)
N1: (47.012,98.436,26.376)
N3: (48.520,99.747,27.728)
N6: (44.729,98.369,26.710)
N7: (45.239,100.298,29.040)
N9: (47.335,100.976,29.468)
O5': (45.704,103.000,32.354)
O3': (48.121,105.281,30.369)
Image (generated by PyMOL):