Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1897:A1921
Extra
PDB:
ATOM 1 O3' G A1896 -82.405 -18.042 14.682 1.00 1.59 O
ATOM 2 P G A1897 -82.389 -18.034 13.095 1.00 15.24 P
ATOM 3 OP1 G A1897 -82.621 -19.429 12.662 1.00 15.24 O
ATOM 4 OP2 G A1897 -81.167 -17.351 12.660 1.00 15.24 O
ATOM 5 O5' G A1897 -83.649 -17.153 12.758 1.00 15.24 O
ATOM 6 C5' G A1897 -84.894 -17.439 13.376 1.00 15.24 C
ATOM 7 C4' G A1897 -85.865 -16.304 13.217 1.00 15.24 C
ATOM 8 O4' G A1897 -85.530 -15.238 14.129 1.00 15.24 O
ATOM 9 C3' G A1897 -85.875 -15.627 11.865 1.00 15.24 C
ATOM 10 O3' G A1897 -86.607 -16.337 10.904 1.00 15.24 O
ATOM 11 C2' G A1897 -86.494 -14.317 12.206 1.00 15.24 C
ATOM 12 O2' G A1897 -87.866 -14.517 12.497 1.00 15.24 O
ATOM 13 C1' G A1897 -85.780 -14.009 13.510 1.00 15.24 C
ATOM 14 N9 G A1897 -84.486 -13.322 13.298 1.00 15.28 N
ATOM 15 C8 G A1897 -83.250 -13.814 13.634 1.00 15.28 C
ATOM 16 N7 G A1897 -82.284 -12.988 13.375 1.00 15.28 N
ATOM 17 C5 G A1897 -82.914 -11.868 12.848 1.00 15.28 C
ATOM 18 C6 G A1897 -82.387 -10.645 12.367 1.00 15.28 C
ATOM 19 O6 G A1897 -81.236 -10.247 12.291 1.00 15.28 O
ATOM 20 N1 G A1897 -83.336 -9.785 11.915 1.00 15.28 N
ATOM 21 C2 G A1897 -84.656 -10.056 11.921 1.00 15.28 C
ATOM 22 N2 G A1897 -85.404 -9.057 11.424 1.00 15.28 N
ATOM 23 N3 G A1897 -85.190 -11.187 12.357 1.00 15.28 N
ATOM 24 C4 G A1897 -84.264 -12.051 12.805 1.00 15.28 C
ATOM 25 P C A1898 -86.064 -16.416 9.417 1.00 12.32 P
ATOM 26 OP1 C A1898 -86.932 -17.354 8.669 1.00 12.32 O
ATOM 27 OP2 C A1898 -84.602 -16.700 9.498 1.00 12.32 O
ATOM 28 O5' C A1898 -86.301 -14.940 8.906 1.00 12.32 O
TER
ATOM 1 O3' A B1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 2 P A B1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 3 OP1 A B1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 4 OP2 A B1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 5 O5' A B1921 -92.714 -5.913 14.296 1.00 6.80 O
ATOM 6 C5' A B1921 -92.119 -4.766 13.719 1.00 6.80 C
ATOM 7 C4' A B1921 -90.900 -5.141 12.923 1.00 6.80 C
ATOM 8 O4' A B1921 -90.264 -6.274 13.545 1.00 6.80 O
ATOM 9 C3' A B1921 -91.145 -5.574 11.476 1.00 6.80 C
ATOM 10 O3' A B1921 -91.175 -4.479 10.582 1.00 6.80 O
ATOM 11 C2' A B1921 -89.994 -6.535 11.187 1.00 6.80 C
ATOM 12 O2' A B1921 -88.836 -5.838 10.729 1.00 6.80 O
ATOM 13 C1' A B1921 -89.709 -7.128 12.565 1.00 6.80 C
ATOM 14 N9 A B1921 -90.292 -8.475 12.728 1.00 6.70 N
ATOM 15 C8 A B1921 -91.537 -8.774 13.187 1.00 6.70 C
ATOM 16 N7 A B1921 -91.775 -10.050 13.248 1.00 6.70 N
ATOM 17 C5 A B1921 -90.609 -10.636 12.794 1.00 6.70 C
ATOM 18 C6 A B1921 -90.229 -11.971 12.617 1.00 6.70 C
ATOM 19 N6 A B1921 -91.021 -13.012 12.889 1.00 6.70 N
ATOM 20 N1 A B1921 -88.995 -12.212 12.161 1.00 6.70 N
ATOM 21 C2 A B1921 -88.200 -11.193 11.898 1.00 6.70 C
ATOM 22 N3 A B1921 -88.454 -9.902 12.029 1.00 6.70 N
ATOM 23 C4 A B1921 -89.687 -9.681 12.484 1.00 6.70 C
ATOM 24 P G B1922 -92.480 -4.140 9.728 1.00 9.15 P
ATOM 25 OP1 G B1922 -92.518 -2.677 9.562 1.00 9.15 O
ATOM 26 OP2 G B1922 -93.631 -4.834 10.354 1.00 9.15 O
ATOM 27 O5' G B1922 -92.155 -4.792 8.374 1.00 9.15 O
TER
ATOM 2 P G A1897 -82.389 -18.034 13.095 1.00 15.24 P
ATOM 3 OP1 G A1897 -82.621 -19.429 12.662 1.00 15.24 O
ATOM 4 OP2 G A1897 -81.167 -17.351 12.660 1.00 15.24 O
ATOM 5 O5' G A1897 -83.649 -17.153 12.758 1.00 15.24 O
ATOM 6 C5' G A1897 -84.894 -17.439 13.376 1.00 15.24 C
ATOM 7 C4' G A1897 -85.865 -16.304 13.217 1.00 15.24 C
ATOM 8 O4' G A1897 -85.530 -15.238 14.129 1.00 15.24 O
ATOM 9 C3' G A1897 -85.875 -15.627 11.865 1.00 15.24 C
ATOM 10 O3' G A1897 -86.607 -16.337 10.904 1.00 15.24 O
ATOM 11 C2' G A1897 -86.494 -14.317 12.206 1.00 15.24 C
ATOM 12 O2' G A1897 -87.866 -14.517 12.497 1.00 15.24 O
ATOM 13 C1' G A1897 -85.780 -14.009 13.510 1.00 15.24 C
ATOM 14 N9 G A1897 -84.486 -13.322 13.298 1.00 15.28 N
ATOM 15 C8 G A1897 -83.250 -13.814 13.634 1.00 15.28 C
ATOM 16 N7 G A1897 -82.284 -12.988 13.375 1.00 15.28 N
ATOM 17 C5 G A1897 -82.914 -11.868 12.848 1.00 15.28 C
ATOM 18 C6 G A1897 -82.387 -10.645 12.367 1.00 15.28 C
ATOM 19 O6 G A1897 -81.236 -10.247 12.291 1.00 15.28 O
ATOM 20 N1 G A1897 -83.336 -9.785 11.915 1.00 15.28 N
ATOM 21 C2 G A1897 -84.656 -10.056 11.921 1.00 15.28 C
ATOM 22 N2 G A1897 -85.404 -9.057 11.424 1.00 15.28 N
ATOM 23 N3 G A1897 -85.190 -11.187 12.357 1.00 15.28 N
ATOM 24 C4 G A1897 -84.264 -12.051 12.805 1.00 15.28 C
ATOM 25 P C A1898 -86.064 -16.416 9.417 1.00 12.32 P
ATOM 26 OP1 C A1898 -86.932 -17.354 8.669 1.00 12.32 O
ATOM 27 OP2 C A1898 -84.602 -16.700 9.498 1.00 12.32 O
ATOM 28 O5' C A1898 -86.301 -14.940 8.906 1.00 12.32 O
TER
ATOM 1 O3' A B1920 -93.137 -5.964 16.763 1.00 19.33 O
ATOM 2 P A B1921 -93.897 -5.791 15.356 1.00 6.80 P
ATOM 3 OP1 A B1921 -94.452 -4.431 15.324 1.00 6.80 O
ATOM 4 OP2 A B1921 -94.823 -6.930 15.209 1.00 6.80 O
ATOM 5 O5' A B1921 -92.714 -5.913 14.296 1.00 6.80 O
ATOM 6 C5' A B1921 -92.119 -4.766 13.719 1.00 6.80 C
ATOM 7 C4' A B1921 -90.900 -5.141 12.923 1.00 6.80 C
ATOM 8 O4' A B1921 -90.264 -6.274 13.545 1.00 6.80 O
ATOM 9 C3' A B1921 -91.145 -5.574 11.476 1.00 6.80 C
ATOM 10 O3' A B1921 -91.175 -4.479 10.582 1.00 6.80 O
ATOM 11 C2' A B1921 -89.994 -6.535 11.187 1.00 6.80 C
ATOM 12 O2' A B1921 -88.836 -5.838 10.729 1.00 6.80 O
ATOM 13 C1' A B1921 -89.709 -7.128 12.565 1.00 6.80 C
ATOM 14 N9 A B1921 -90.292 -8.475 12.728 1.00 6.70 N
ATOM 15 C8 A B1921 -91.537 -8.774 13.187 1.00 6.70 C
ATOM 16 N7 A B1921 -91.775 -10.050 13.248 1.00 6.70 N
ATOM 17 C5 A B1921 -90.609 -10.636 12.794 1.00 6.70 C
ATOM 18 C6 A B1921 -90.229 -11.971 12.617 1.00 6.70 C
ATOM 19 N6 A B1921 -91.021 -13.012 12.889 1.00 6.70 N
ATOM 20 N1 A B1921 -88.995 -12.212 12.161 1.00 6.70 N
ATOM 21 C2 A B1921 -88.200 -11.193 11.898 1.00 6.70 C
ATOM 22 N3 A B1921 -88.454 -9.902 12.029 1.00 6.70 N
ATOM 23 C4 A B1921 -89.687 -9.681 12.484 1.00 6.70 C
ATOM 24 P G B1922 -92.480 -4.140 9.728 1.00 9.15 P
ATOM 25 OP1 G B1922 -92.518 -2.677 9.562 1.00 9.15 O
ATOM 26 OP2 G B1922 -93.631 -4.834 10.354 1.00 9.15 O
ATOM 27 O5' G B1922 -92.155 -4.792 8.374 1.00 9.15 O
TER
Atoms:
OP1: (-82.621,-19.429,12.662)
OP2: (-81.167,-17.351,12.660)
C3': (-85.875,-15.627,11.865)
C1': (-85.780,-14.009,13.510)
C5': (-84.894,-17.439,13.376)
O6: (-81.236,-10.247,12.291)
O4': (-85.530,-15.238,14.129)
C8: (-83.250,-13.814,13.634)
C2: (-84.656,-10.056,11.921)
C6: (-82.387,-10.645,12.367)
C5: (-82.914,-11.868,12.848)
C4: (-84.264,-12.051,12.805)
P: (-82.389,-18.034,13.095)
C4': (-85.865,-16.304,13.217)
C2': (-86.494,-14.317,12.206)
O2': (-87.866,-14.517,12.497)
N1: (-83.336,-9.785,11.915)
N2: (-85.404,-9.057,11.424)
N3: (-85.190,-11.187,12.357)
N7: (-82.284,-12.988,13.375)
N9: (-84.486,-13.322,13.298)
O5': (-83.649,-17.153,12.758)
O3': (-86.607,-16.337,10.904)
OP2: (-81.167,-17.351,12.660)
C3': (-85.875,-15.627,11.865)
C1': (-85.780,-14.009,13.510)
C5': (-84.894,-17.439,13.376)
O6: (-81.236,-10.247,12.291)
O4': (-85.530,-15.238,14.129)
C8: (-83.250,-13.814,13.634)
C2: (-84.656,-10.056,11.921)
C6: (-82.387,-10.645,12.367)
C5: (-82.914,-11.868,12.848)
C4: (-84.264,-12.051,12.805)
P: (-82.389,-18.034,13.095)
C4': (-85.865,-16.304,13.217)
C2': (-86.494,-14.317,12.206)
O2': (-87.866,-14.517,12.497)
N1: (-83.336,-9.785,11.915)
N2: (-85.404,-9.057,11.424)
N3: (-85.190,-11.187,12.357)
N7: (-82.284,-12.988,13.375)
N9: (-84.486,-13.322,13.298)
O5': (-83.649,-17.153,12.758)
O3': (-86.607,-16.337,10.904)
OP1: (-94.452,-4.431,15.324)
OP2: (-94.823,-6.930,15.209)
C3': (-91.145,-5.574,11.476)
C1': (-89.709,-7.128,12.565)
C5': (-92.119,-4.766,13.719)
O4': (-90.264,-6.274,13.545)
C8: (-91.537,-8.774,13.187)
O2': (-88.836,-5.838,10.729)
C6: (-90.229,-11.971,12.617)
C5: (-90.609,-10.636,12.794)
C4: (-89.687,-9.681,12.484)
P: (-93.897,-5.791,15.356)
C4': (-90.900,-5.141,12.923)
C2': (-89.994,-6.535,11.187)
C2: (-88.200,-11.193,11.898)
N1: (-88.995,-12.212,12.161)
N3: (-88.454,-9.902,12.029)
N6: (-91.021,-13.012,12.889)
N7: (-91.775,-10.050,13.248)
N9: (-90.292,-8.475,12.728)
O5': (-92.714,-5.913,14.296)
O3': (-91.175,-4.479,10.582)
OP2: (-94.823,-6.930,15.209)
C3': (-91.145,-5.574,11.476)
C1': (-89.709,-7.128,12.565)
C5': (-92.119,-4.766,13.719)
O4': (-90.264,-6.274,13.545)
C8: (-91.537,-8.774,13.187)
O2': (-88.836,-5.838,10.729)
C6: (-90.229,-11.971,12.617)
C5: (-90.609,-10.636,12.794)
C4: (-89.687,-9.681,12.484)
P: (-93.897,-5.791,15.356)
C4': (-90.900,-5.141,12.923)
C2': (-89.994,-6.535,11.187)
C2: (-88.200,-11.193,11.898)
N1: (-88.995,-12.212,12.161)
N3: (-88.454,-9.902,12.029)
N6: (-91.021,-13.012,12.889)
N7: (-91.775,-10.050,13.248)
N9: (-90.292,-8.475,12.728)
O5': (-92.714,-5.913,14.296)
O3': (-91.175,-4.479,10.582)
Image (generated by PyMOL):