Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:4105:4106
Extra
PDB:
ATOM 1 O3' A A 104 46.709 0.898 133.263 1.00 49.92 O
ATOM 2 P C A 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C A 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C A 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C A 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C A 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C A 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C A 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C A 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C A 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C A 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C A 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C A 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C A 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C A 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C A 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C A 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C A 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C A 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C A 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C A 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G A 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G A 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G A 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G A 106 45.087 2.727 140.518 1.00 56.31 O
TER
ATOM 1 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 2 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 3 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 4 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 5 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
ATOM 6 C5' G B 106 44.529 1.724 141.333 1.00 56.67 C
ATOM 7 C4' G B 106 43.160 2.127 141.774 1.00 57.08 C
ATOM 8 O4' G B 106 43.264 3.259 142.661 1.00 57.88 O
ATOM 9 C3' G B 106 42.230 2.592 140.666 1.00 56.48 C
ATOM 10 O3' G B 106 41.554 1.513 140.058 1.00 55.92 O
ATOM 11 C2' G B 106 41.299 3.538 141.387 1.00 57.18 C
ATOM 12 O2' G B 106 40.318 2.810 142.087 1.00 57.56 O
ATOM 13 C1' G B 106 42.245 4.184 142.388 1.00 57.93 C
ATOM 14 N9 G B 106 42.879 5.358 141.805 1.00 57.76 N
ATOM 15 C8 G B 106 44.193 5.431 141.429 1.00 57.48 C
ATOM 16 N7 G B 106 44.463 6.578 140.897 1.00 57.37 N
ATOM 17 C5 G B 106 43.269 7.293 140.914 1.00 57.58 C
ATOM 18 C6 G B 106 42.954 8.596 140.465 1.00 57.60 C
ATOM 19 O6 G B 106 43.702 9.408 139.939 1.00 57.43 O
ATOM 20 N1 G B 106 41.628 8.927 140.672 1.00 57.88 N
ATOM 21 C2 G B 106 40.723 8.084 141.249 1.00 58.11 C
ATOM 22 N2 G B 106 39.497 8.573 141.386 1.00 58.40 N
ATOM 23 N3 G B 106 40.971 6.868 141.679 1.00 58.10 N
ATOM 24 C4 G B 106 42.263 6.541 141.472 1.00 57.82 C
ATOM 25 P C B 107 41.036 1.592 138.534 1.00 61.81 P
ATOM 26 OP1 C B 107 40.253 0.361 138.270 1.00 61.49 O
ATOM 27 OP2 C B 107 42.213 1.873 137.693 1.00 61.27 O
ATOM 28 O5' C B 107 40.083 2.850 138.535 1.00 62.10 O
TER
ATOM 2 P C A 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C A 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C A 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C A 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C A 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C A 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C A 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C A 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C A 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C A 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C A 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C A 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C A 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C A 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C A 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C A 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C A 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C A 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C A 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C A 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G A 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G A 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G A 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G A 106 45.087 2.727 140.518 1.00 56.31 O
TER
ATOM 1 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 2 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 3 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 4 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 5 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
ATOM 6 C5' G B 106 44.529 1.724 141.333 1.00 56.67 C
ATOM 7 C4' G B 106 43.160 2.127 141.774 1.00 57.08 C
ATOM 8 O4' G B 106 43.264 3.259 142.661 1.00 57.88 O
ATOM 9 C3' G B 106 42.230 2.592 140.666 1.00 56.48 C
ATOM 10 O3' G B 106 41.554 1.513 140.058 1.00 55.92 O
ATOM 11 C2' G B 106 41.299 3.538 141.387 1.00 57.18 C
ATOM 12 O2' G B 106 40.318 2.810 142.087 1.00 57.56 O
ATOM 13 C1' G B 106 42.245 4.184 142.388 1.00 57.93 C
ATOM 14 N9 G B 106 42.879 5.358 141.805 1.00 57.76 N
ATOM 15 C8 G B 106 44.193 5.431 141.429 1.00 57.48 C
ATOM 16 N7 G B 106 44.463 6.578 140.897 1.00 57.37 N
ATOM 17 C5 G B 106 43.269 7.293 140.914 1.00 57.58 C
ATOM 18 C6 G B 106 42.954 8.596 140.465 1.00 57.60 C
ATOM 19 O6 G B 106 43.702 9.408 139.939 1.00 57.43 O
ATOM 20 N1 G B 106 41.628 8.927 140.672 1.00 57.88 N
ATOM 21 C2 G B 106 40.723 8.084 141.249 1.00 58.11 C
ATOM 22 N2 G B 106 39.497 8.573 141.386 1.00 58.40 N
ATOM 23 N3 G B 106 40.971 6.868 141.679 1.00 58.10 N
ATOM 24 C4 G B 106 42.263 6.541 141.472 1.00 57.82 C
ATOM 25 P C B 107 41.036 1.592 138.534 1.00 61.81 P
ATOM 26 OP1 C B 107 40.253 0.361 138.270 1.00 61.49 O
ATOM 27 OP2 C B 107 42.213 1.873 137.693 1.00 61.27 O
ATOM 28 O5' C B 107 40.083 2.850 138.535 1.00 62.10 O
TER
Atoms:
C2: (48.554,-2.743,136.812)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
OP1: (46.772,3.643,138.923)
OP2: (47.540,2.550,141.130)
C3': (42.230,2.592,140.666)
C1': (42.245,4.184,142.388)
C5': (44.529,1.724,141.333)
O6: (43.702,9.408,139.939)
O4': (43.264,3.259,142.661)
C8: (44.193,5.431,141.429)
C2: (40.723,8.084,141.249)
C6: (42.954,8.596,140.465)
C5: (43.269,7.293,140.914)
C4: (42.263,6.541,141.472)
P: (46.570,2.624,139.976)
C4': (43.160,2.127,141.774)
C2': (41.299,3.538,141.387)
O2': (40.318,2.810,142.087)
N1: (41.628,8.927,140.672)
N2: (39.497,8.573,141.386)
N3: (40.971,6.868,141.679)
N7: (44.463,6.578,140.897)
N9: (42.879,5.358,141.805)
O5': (45.087,2.727,140.518)
O3': (41.554,1.513,140.058)
OP2: (47.540,2.550,141.130)
C3': (42.230,2.592,140.666)
C1': (42.245,4.184,142.388)
C5': (44.529,1.724,141.333)
O6: (43.702,9.408,139.939)
O4': (43.264,3.259,142.661)
C8: (44.193,5.431,141.429)
C2: (40.723,8.084,141.249)
C6: (42.954,8.596,140.465)
C5: (43.269,7.293,140.914)
C4: (42.263,6.541,141.472)
P: (46.570,2.624,139.976)
C4': (43.160,2.127,141.774)
C2': (41.299,3.538,141.387)
O2': (40.318,2.810,142.087)
N1: (41.628,8.927,140.672)
N2: (39.497,8.573,141.386)
N3: (40.971,6.868,141.679)
N7: (44.463,6.578,140.897)
N9: (42.879,5.358,141.805)
O5': (45.087,2.727,140.518)
O3': (41.554,1.513,140.058)
Image (generated by PyMOL):