Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1273:A1274
Extra
PDB:
ATOM 1 O3' A A1272 7.640 133.852 54.503 1.00 44.93 O
ATOM 2 P U A1273 6.668 134.655 53.530 1.00 47.85 P
ATOM 3 OP1 U A1273 5.275 134.351 53.936 1.00 45.97 O
ATOM 4 OP2 U A1273 7.094 134.453 52.108 1.00 47.28 O
ATOM 5 O5' U A1273 6.978 136.153 53.936 1.00 46.59 O
ATOM 6 C5' U A1273 8.299 136.676 53.863 1.00 45.15 C
ATOM 7 C4' U A1273 8.232 138.157 54.011 1.00 45.48 C
ATOM 8 O4' U A1273 9.563 138.720 54.146 1.00 46.23 O
ATOM 9 C3' U A1273 7.592 138.859 52.825 1.00 46.14 C
ATOM 10 O3' U A1273 6.897 140.001 53.285 1.00 48.02 O
ATOM 11 C2' U A1273 8.807 139.301 52.023 1.00 45.84 C
ATOM 12 O2' U A1273 8.579 140.395 51.164 1.00 47.51 O
ATOM 13 C1' U A1273 9.756 139.695 53.145 1.00 44.83 C
ATOM 14 N1 U A1273 11.160 139.676 52.735 1.00 41.25 N
ATOM 15 C2 U A1273 11.843 140.874 52.720 1.00 40.54 C
ATOM 16 O2 U A1273 11.333 141.942 53.040 1.00 41.67 O
ATOM 17 N3 U A1273 13.150 140.775 52.316 1.00 37.98 N
ATOM 18 C4 U A1273 13.819 139.630 51.933 1.00 36.87 C
ATOM 19 O4 U A1273 14.965 139.723 51.512 1.00 32.80 O
ATOM 20 C5 U A1273 13.045 138.436 51.984 1.00 37.39 C
ATOM 21 C6 U A1273 11.775 138.496 52.374 1.00 40.10 C
ATOM 22 P G A1274 5.347 140.162 52.949 1.00 48.20 P
ATOM 23 OP1 G A1274 5.105 139.530 51.630 1.00 47.13 O
ATOM 24 OP2 G A1274 4.935 141.554 53.185 1.00 48.11 O
ATOM 25 O5' G A1274 4.640 139.325 54.091 1.00 48.45 O
TER
ATOM 1 O3' U B1273 6.897 140.001 53.285 1.00 48.02 O
ATOM 2 P G B1274 5.347 140.162 52.949 1.00 48.20 P
ATOM 3 OP1 G B1274 5.105 139.530 51.630 1.00 47.13 O
ATOM 4 OP2 G B1274 4.935 141.554 53.185 1.00 48.11 O
ATOM 5 O5' G B1274 4.640 139.325 54.091 1.00 48.45 O
ATOM 6 C5' G B1274 4.696 139.756 55.456 1.00 51.53 C
ATOM 7 C4' G B1274 3.934 138.788 56.309 1.00 54.28 C
ATOM 8 O4' G B1274 2.531 138.853 55.943 1.00 57.77 O
ATOM 9 C3' G B1274 4.349 137.332 56.113 1.00 53.99 C
ATOM 10 O3' G B1274 4.061 136.607 57.296 1.00 50.69 O
ATOM 11 C2' G B1274 3.369 136.842 55.056 1.00 56.64 C
ATOM 12 O2' G B1274 3.181 135.452 55.197 1.00 56.08 O
ATOM 13 C1' G B1274 2.103 137.588 55.477 1.00 59.98 C
ATOM 14 N9 G B1274 1.111 137.806 54.432 1.00 63.86 N
ATOM 15 C8 G B1274 1.312 138.392 53.208 1.00 64.62 C
ATOM 16 N7 G B1274 0.229 138.454 52.489 1.00 65.92 N
ATOM 17 C5 G B1274 -0.747 137.874 53.286 1.00 65.99 C
ATOM 18 C6 G B1274 -2.119 137.658 53.037 1.00 66.80 C
ATOM 19 O6 G B1274 -2.768 137.937 52.019 1.00 68.10 O
ATOM 20 N1 G B1274 -2.748 137.047 54.121 1.00 66.32 N
ATOM 21 C2 G B1274 -2.133 136.685 55.292 1.00 65.32 C
ATOM 22 N2 G B1274 -2.909 136.121 56.223 1.00 64.07 N
ATOM 23 N3 G B1274 -0.850 136.870 55.530 1.00 65.91 N
ATOM 24 C4 G B1274 -0.222 137.470 54.490 1.00 65.19 C
ATOM 25 P G B1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 26 OP1 G B1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 27 OP2 G B1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 28 O5' G B1275 6.511 136.618 57.882 1.00 45.93 O
TER
ATOM 2 P U A1273 6.668 134.655 53.530 1.00 47.85 P
ATOM 3 OP1 U A1273 5.275 134.351 53.936 1.00 45.97 O
ATOM 4 OP2 U A1273 7.094 134.453 52.108 1.00 47.28 O
ATOM 5 O5' U A1273 6.978 136.153 53.936 1.00 46.59 O
ATOM 6 C5' U A1273 8.299 136.676 53.863 1.00 45.15 C
ATOM 7 C4' U A1273 8.232 138.157 54.011 1.00 45.48 C
ATOM 8 O4' U A1273 9.563 138.720 54.146 1.00 46.23 O
ATOM 9 C3' U A1273 7.592 138.859 52.825 1.00 46.14 C
ATOM 10 O3' U A1273 6.897 140.001 53.285 1.00 48.02 O
ATOM 11 C2' U A1273 8.807 139.301 52.023 1.00 45.84 C
ATOM 12 O2' U A1273 8.579 140.395 51.164 1.00 47.51 O
ATOM 13 C1' U A1273 9.756 139.695 53.145 1.00 44.83 C
ATOM 14 N1 U A1273 11.160 139.676 52.735 1.00 41.25 N
ATOM 15 C2 U A1273 11.843 140.874 52.720 1.00 40.54 C
ATOM 16 O2 U A1273 11.333 141.942 53.040 1.00 41.67 O
ATOM 17 N3 U A1273 13.150 140.775 52.316 1.00 37.98 N
ATOM 18 C4 U A1273 13.819 139.630 51.933 1.00 36.87 C
ATOM 19 O4 U A1273 14.965 139.723 51.512 1.00 32.80 O
ATOM 20 C5 U A1273 13.045 138.436 51.984 1.00 37.39 C
ATOM 21 C6 U A1273 11.775 138.496 52.374 1.00 40.10 C
ATOM 22 P G A1274 5.347 140.162 52.949 1.00 48.20 P
ATOM 23 OP1 G A1274 5.105 139.530 51.630 1.00 47.13 O
ATOM 24 OP2 G A1274 4.935 141.554 53.185 1.00 48.11 O
ATOM 25 O5' G A1274 4.640 139.325 54.091 1.00 48.45 O
TER
ATOM 1 O3' U B1273 6.897 140.001 53.285 1.00 48.02 O
ATOM 2 P G B1274 5.347 140.162 52.949 1.00 48.20 P
ATOM 3 OP1 G B1274 5.105 139.530 51.630 1.00 47.13 O
ATOM 4 OP2 G B1274 4.935 141.554 53.185 1.00 48.11 O
ATOM 5 O5' G B1274 4.640 139.325 54.091 1.00 48.45 O
ATOM 6 C5' G B1274 4.696 139.756 55.456 1.00 51.53 C
ATOM 7 C4' G B1274 3.934 138.788 56.309 1.00 54.28 C
ATOM 8 O4' G B1274 2.531 138.853 55.943 1.00 57.77 O
ATOM 9 C3' G B1274 4.349 137.332 56.113 1.00 53.99 C
ATOM 10 O3' G B1274 4.061 136.607 57.296 1.00 50.69 O
ATOM 11 C2' G B1274 3.369 136.842 55.056 1.00 56.64 C
ATOM 12 O2' G B1274 3.181 135.452 55.197 1.00 56.08 O
ATOM 13 C1' G B1274 2.103 137.588 55.477 1.00 59.98 C
ATOM 14 N9 G B1274 1.111 137.806 54.432 1.00 63.86 N
ATOM 15 C8 G B1274 1.312 138.392 53.208 1.00 64.62 C
ATOM 16 N7 G B1274 0.229 138.454 52.489 1.00 65.92 N
ATOM 17 C5 G B1274 -0.747 137.874 53.286 1.00 65.99 C
ATOM 18 C6 G B1274 -2.119 137.658 53.037 1.00 66.80 C
ATOM 19 O6 G B1274 -2.768 137.937 52.019 1.00 68.10 O
ATOM 20 N1 G B1274 -2.748 137.047 54.121 1.00 66.32 N
ATOM 21 C2 G B1274 -2.133 136.685 55.292 1.00 65.32 C
ATOM 22 N2 G B1274 -2.909 136.121 56.223 1.00 64.07 N
ATOM 23 N3 G B1274 -0.850 136.870 55.530 1.00 65.91 N
ATOM 24 C4 G B1274 -0.222 137.470 54.490 1.00 65.19 C
ATOM 25 P G B1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 26 OP1 G B1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 27 OP2 G B1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 28 O5' G B1275 6.511 136.618 57.882 1.00 45.93 O
TER
Atoms:
C4: (13.819,139.630,51.933)
N3: (13.150,140.775,52.316)
OP1: (5.275,134.351,53.936)
OP2: (7.094,134.453,52.108)
C2: (11.843,140.874,52.720)
C1': (9.756,139.695,53.145)
C3': (7.592,138.859,52.825)
O5': (6.978,136.153,53.936)
O4': (9.563,138.720,54.146)
C5': (8.299,136.676,53.863)
P: (6.668,134.655,53.530)
C4': (8.232,138.157,54.011)
C2': (8.807,139.301,52.023)
O2': (8.579,140.395,51.164)
N1: (11.160,139.676,52.735)
O4: (14.965,139.723,51.512)
O2: (11.333,141.942,53.040)
C6: (11.775,138.496,52.374)
C5: (13.045,138.436,51.984)
O3': (6.897,140.001,53.285)
N3: (13.150,140.775,52.316)
OP1: (5.275,134.351,53.936)
OP2: (7.094,134.453,52.108)
C2: (11.843,140.874,52.720)
C1': (9.756,139.695,53.145)
C3': (7.592,138.859,52.825)
O5': (6.978,136.153,53.936)
O4': (9.563,138.720,54.146)
C5': (8.299,136.676,53.863)
P: (6.668,134.655,53.530)
C4': (8.232,138.157,54.011)
C2': (8.807,139.301,52.023)
O2': (8.579,140.395,51.164)
N1: (11.160,139.676,52.735)
O4: (14.965,139.723,51.512)
O2: (11.333,141.942,53.040)
C6: (11.775,138.496,52.374)
C5: (13.045,138.436,51.984)
O3': (6.897,140.001,53.285)
OP1: (5.105,139.530,51.630)
OP2: (4.935,141.554,53.185)
C3': (4.349,137.332,56.113)
C1': (2.103,137.588,55.477)
C5': (4.696,139.756,55.456)
O6: (-2.768,137.937,52.019)
O4': (2.531,138.853,55.943)
C8: (1.312,138.392,53.208)
C2: (-2.133,136.685,55.292)
C6: (-2.119,137.658,53.037)
C5: (-0.747,137.874,53.286)
C4: (-0.222,137.470,54.490)
P: (5.347,140.162,52.949)
C4': (3.934,138.788,56.309)
C2': (3.369,136.842,55.056)
O2': (3.181,135.452,55.197)
N1: (-2.748,137.047,54.121)
N2: (-2.909,136.121,56.223)
N3: (-0.850,136.870,55.530)
N7: (0.229,138.454,52.489)
N9: (1.111,137.806,54.432)
O5': (4.640,139.325,54.091)
O3': (4.061,136.607,57.296)
OP2: (4.935,141.554,53.185)
C3': (4.349,137.332,56.113)
C1': (2.103,137.588,55.477)
C5': (4.696,139.756,55.456)
O6: (-2.768,137.937,52.019)
O4': (2.531,138.853,55.943)
C8: (1.312,138.392,53.208)
C2: (-2.133,136.685,55.292)
C6: (-2.119,137.658,53.037)
C5: (-0.747,137.874,53.286)
C4: (-0.222,137.470,54.490)
P: (5.347,140.162,52.949)
C4': (3.934,138.788,56.309)
C2': (3.369,136.842,55.056)
O2': (3.181,135.452,55.197)
N1: (-2.748,137.047,54.121)
N2: (-2.909,136.121,56.223)
N3: (-0.850,136.870,55.530)
N7: (0.229,138.454,52.489)
N9: (1.111,137.806,54.432)
O5': (4.640,139.325,54.091)
O3': (4.061,136.607,57.296)
Image (generated by PyMOL):