Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBY:B63:B64
Extra
PDB:
ATOM 1 O3' G A 62 -21.688 45.946 7.235 1.00 67.69 O
ATOM 2 P U A 63 -23.148 46.189 6.647 1.00 70.17 P
ATOM 3 OP1 U A 63 -24.039 45.991 7.823 1.00 69.98 O
ATOM 4 OP2 U A 63 -23.409 45.438 5.391 1.00 71.19 O
ATOM 5 O5' U A 63 -23.130 47.739 6.287 1.00 72.29 O
ATOM 6 C5' U A 63 -22.745 48.710 7.271 1.00 72.12 C
ATOM 7 C4' U A 63 -21.703 49.665 6.720 1.00 72.35 C
ATOM 8 O4' U A 63 -21.512 50.809 7.571 1.00 72.28 O
ATOM 9 C3' U A 63 -20.331 49.103 6.358 1.00 72.77 C
ATOM 10 O3' U A 63 -20.174 48.831 4.934 1.00 74.91 O
ATOM 11 C2' U A 63 -19.308 49.984 7.088 1.00 71.07 C
ATOM 12 O2' U A 63 -18.324 50.493 6.211 1.00 71.52 O
ATOM 13 C1' U A 63 -20.150 51.164 7.574 1.00 72.50 C
ATOM 14 N1 U A 63 -19.800 51.459 8.960 1.00 75.21 N
ATOM 15 C2 U A 63 -18.957 52.514 9.196 1.00 77.78 C
ATOM 16 O2 U A 63 -18.521 53.218 8.305 1.00 81.00 O
ATOM 17 N3 U A 63 -18.638 52.722 10.512 1.00 78.38 N
ATOM 18 C4 U A 63 -19.082 51.996 11.594 1.00 77.50 C
ATOM 19 O4 U A 63 -18.692 52.289 12.724 1.00 77.14 O
ATOM 20 C5 U A 63 -19.974 50.927 11.263 1.00 76.93 C
ATOM 21 C6 U A 63 -20.296 50.704 9.982 1.00 75.17 C
ATOM 22 P G A 64 -19.795 50.017 3.905 1.00 76.05 P
ATOM 23 OP1 G A 64 -18.487 49.752 3.234 1.00 74.59 O
ATOM 24 OP2 G A 64 -19.997 51.302 4.628 1.00 76.32 O
ATOM 25 O5' G A 64 -20.960 49.918 2.819 1.00 77.20 O
TER
ATOM 1 O3' U B 63 -20.174 48.831 4.934 1.00 74.91 O
ATOM 2 P G B 64 -19.795 50.017 3.905 1.00 76.05 P
ATOM 3 OP1 G B 64 -18.487 49.752 3.234 1.00 74.59 O
ATOM 4 OP2 G B 64 -19.997 51.302 4.628 1.00 76.32 O
ATOM 5 O5' G B 64 -20.960 49.918 2.819 1.00 77.20 O
ATOM 6 C5' G B 64 -21.998 50.898 2.749 1.00 80.54 C
ATOM 7 C4' G B 64 -23.314 50.233 2.447 1.00 82.48 C
ATOM 8 O4' G B 64 -23.129 49.390 1.294 1.00 84.38 O
ATOM 9 C3' G B 64 -23.780 49.271 3.521 1.00 83.44 C
ATOM 10 O3' G B 64 -24.597 49.895 4.513 1.00 84.23 O
ATOM 11 C2' G B 64 -24.636 48.265 2.752 1.00 84.97 C
ATOM 12 O2' G B 64 -26.006 48.602 2.741 1.00 86.09 O
ATOM 13 C1' G B 64 -24.088 48.365 1.328 1.00 86.63 C
ATOM 14 N9 G B 64 -23.507 47.141 0.788 1.00 89.83 N
ATOM 15 C8 G B 64 -22.327 46.533 1.135 1.00 91.24 C
ATOM 16 N7 G B 64 -22.107 45.433 0.463 1.00 92.27 N
ATOM 17 C5 G B 64 -23.213 45.317 -0.377 1.00 93.34 C
ATOM 18 C6 G B 64 -23.560 44.320 -1.354 1.00 94.70 C
ATOM 19 O6 G B 64 -22.930 43.292 -1.674 1.00 95.23 O
ATOM 20 N1 G B 64 -24.780 44.617 -1.976 1.00 94.73 N
ATOM 21 C2 G B 64 -25.563 45.720 -1.696 1.00 93.87 C
ATOM 22 N2 G B 64 -26.706 45.844 -2.386 1.00 92.97 N
ATOM 23 N3 G B 64 -25.247 46.637 -0.799 1.00 93.00 N
ATOM 24 C4 G B 64 -24.077 46.375 -0.185 1.00 91.85 C
ATOM 25 P A B 65 -24.940 51.475 4.437 1.00 83.65 P
ATOM 26 OP1 A B 65 -25.803 51.706 3.253 1.00 82.96 O
ATOM 27 OP2 A B 65 -23.718 52.308 4.618 1.00 83.51 O
ATOM 28 O5' A B 65 -25.849 51.655 5.733 1.00 84.25 O
TER
ATOM 2 P U A 63 -23.148 46.189 6.647 1.00 70.17 P
ATOM 3 OP1 U A 63 -24.039 45.991 7.823 1.00 69.98 O
ATOM 4 OP2 U A 63 -23.409 45.438 5.391 1.00 71.19 O
ATOM 5 O5' U A 63 -23.130 47.739 6.287 1.00 72.29 O
ATOM 6 C5' U A 63 -22.745 48.710 7.271 1.00 72.12 C
ATOM 7 C4' U A 63 -21.703 49.665 6.720 1.00 72.35 C
ATOM 8 O4' U A 63 -21.512 50.809 7.571 1.00 72.28 O
ATOM 9 C3' U A 63 -20.331 49.103 6.358 1.00 72.77 C
ATOM 10 O3' U A 63 -20.174 48.831 4.934 1.00 74.91 O
ATOM 11 C2' U A 63 -19.308 49.984 7.088 1.00 71.07 C
ATOM 12 O2' U A 63 -18.324 50.493 6.211 1.00 71.52 O
ATOM 13 C1' U A 63 -20.150 51.164 7.574 1.00 72.50 C
ATOM 14 N1 U A 63 -19.800 51.459 8.960 1.00 75.21 N
ATOM 15 C2 U A 63 -18.957 52.514 9.196 1.00 77.78 C
ATOM 16 O2 U A 63 -18.521 53.218 8.305 1.00 81.00 O
ATOM 17 N3 U A 63 -18.638 52.722 10.512 1.00 78.38 N
ATOM 18 C4 U A 63 -19.082 51.996 11.594 1.00 77.50 C
ATOM 19 O4 U A 63 -18.692 52.289 12.724 1.00 77.14 O
ATOM 20 C5 U A 63 -19.974 50.927 11.263 1.00 76.93 C
ATOM 21 C6 U A 63 -20.296 50.704 9.982 1.00 75.17 C
ATOM 22 P G A 64 -19.795 50.017 3.905 1.00 76.05 P
ATOM 23 OP1 G A 64 -18.487 49.752 3.234 1.00 74.59 O
ATOM 24 OP2 G A 64 -19.997 51.302 4.628 1.00 76.32 O
ATOM 25 O5' G A 64 -20.960 49.918 2.819 1.00 77.20 O
TER
ATOM 1 O3' U B 63 -20.174 48.831 4.934 1.00 74.91 O
ATOM 2 P G B 64 -19.795 50.017 3.905 1.00 76.05 P
ATOM 3 OP1 G B 64 -18.487 49.752 3.234 1.00 74.59 O
ATOM 4 OP2 G B 64 -19.997 51.302 4.628 1.00 76.32 O
ATOM 5 O5' G B 64 -20.960 49.918 2.819 1.00 77.20 O
ATOM 6 C5' G B 64 -21.998 50.898 2.749 1.00 80.54 C
ATOM 7 C4' G B 64 -23.314 50.233 2.447 1.00 82.48 C
ATOM 8 O4' G B 64 -23.129 49.390 1.294 1.00 84.38 O
ATOM 9 C3' G B 64 -23.780 49.271 3.521 1.00 83.44 C
ATOM 10 O3' G B 64 -24.597 49.895 4.513 1.00 84.23 O
ATOM 11 C2' G B 64 -24.636 48.265 2.752 1.00 84.97 C
ATOM 12 O2' G B 64 -26.006 48.602 2.741 1.00 86.09 O
ATOM 13 C1' G B 64 -24.088 48.365 1.328 1.00 86.63 C
ATOM 14 N9 G B 64 -23.507 47.141 0.788 1.00 89.83 N
ATOM 15 C8 G B 64 -22.327 46.533 1.135 1.00 91.24 C
ATOM 16 N7 G B 64 -22.107 45.433 0.463 1.00 92.27 N
ATOM 17 C5 G B 64 -23.213 45.317 -0.377 1.00 93.34 C
ATOM 18 C6 G B 64 -23.560 44.320 -1.354 1.00 94.70 C
ATOM 19 O6 G B 64 -22.930 43.292 -1.674 1.00 95.23 O
ATOM 20 N1 G B 64 -24.780 44.617 -1.976 1.00 94.73 N
ATOM 21 C2 G B 64 -25.563 45.720 -1.696 1.00 93.87 C
ATOM 22 N2 G B 64 -26.706 45.844 -2.386 1.00 92.97 N
ATOM 23 N3 G B 64 -25.247 46.637 -0.799 1.00 93.00 N
ATOM 24 C4 G B 64 -24.077 46.375 -0.185 1.00 91.85 C
ATOM 25 P A B 65 -24.940 51.475 4.437 1.00 83.65 P
ATOM 26 OP1 A B 65 -25.803 51.706 3.253 1.00 82.96 O
ATOM 27 OP2 A B 65 -23.718 52.308 4.618 1.00 83.51 O
ATOM 28 O5' A B 65 -25.849 51.655 5.733 1.00 84.25 O
TER
Atoms:
C4: (-19.082,51.996,11.594)
N3: (-18.638,52.722,10.512)
OP1: (-24.039,45.991,7.823)
OP2: (-23.409,45.438,5.391)
C2: (-18.957,52.514,9.196)
C1': (-20.150,51.164,7.574)
C3': (-20.331,49.103,6.358)
O5': (-23.130,47.739,6.287)
O4': (-21.512,50.809,7.571)
C5': (-22.745,48.710,7.271)
P: (-23.148,46.189,6.647)
C4': (-21.703,49.665,6.720)
C2': (-19.308,49.984,7.088)
O2': (-18.324,50.493,6.211)
N1: (-19.800,51.459,8.960)
O4: (-18.692,52.289,12.724)
O2: (-18.521,53.218,8.305)
C6: (-20.296,50.704,9.982)
C5: (-19.974,50.927,11.263)
O3': (-20.174,48.831,4.934)
N3: (-18.638,52.722,10.512)
OP1: (-24.039,45.991,7.823)
OP2: (-23.409,45.438,5.391)
C2: (-18.957,52.514,9.196)
C1': (-20.150,51.164,7.574)
C3': (-20.331,49.103,6.358)
O5': (-23.130,47.739,6.287)
O4': (-21.512,50.809,7.571)
C5': (-22.745,48.710,7.271)
P: (-23.148,46.189,6.647)
C4': (-21.703,49.665,6.720)
C2': (-19.308,49.984,7.088)
O2': (-18.324,50.493,6.211)
N1: (-19.800,51.459,8.960)
O4: (-18.692,52.289,12.724)
O2: (-18.521,53.218,8.305)
C6: (-20.296,50.704,9.982)
C5: (-19.974,50.927,11.263)
O3': (-20.174,48.831,4.934)
OP1: (-18.487,49.752,3.234)
OP2: (-19.997,51.302,4.628)
C3': (-23.780,49.271,3.521)
C1': (-24.088,48.365,1.328)
C5': (-21.998,50.898,2.749)
O6: (-22.930,43.292,-1.674)
O4': (-23.129,49.390,1.294)
C8: (-22.327,46.533,1.135)
C2: (-25.563,45.720,-1.696)
C6: (-23.560,44.320,-1.354)
C5: (-23.213,45.317,-0.377)
C4: (-24.077,46.375,-0.185)
P: (-19.795,50.017,3.905)
C4': (-23.314,50.233,2.447)
C2': (-24.636,48.265,2.752)
O2': (-26.006,48.602,2.741)
N1: (-24.780,44.617,-1.976)
N2: (-26.706,45.844,-2.386)
N3: (-25.247,46.637,-0.799)
N7: (-22.107,45.433,0.463)
N9: (-23.507,47.141,0.788)
O5': (-20.960,49.918,2.819)
O3': (-24.597,49.895,4.513)
OP2: (-19.997,51.302,4.628)
C3': (-23.780,49.271,3.521)
C1': (-24.088,48.365,1.328)
C5': (-21.998,50.898,2.749)
O6: (-22.930,43.292,-1.674)
O4': (-23.129,49.390,1.294)
C8: (-22.327,46.533,1.135)
C2: (-25.563,45.720,-1.696)
C6: (-23.560,44.320,-1.354)
C5: (-23.213,45.317,-0.377)
C4: (-24.077,46.375,-0.185)
P: (-19.795,50.017,3.905)
C4': (-23.314,50.233,2.447)
C2': (-24.636,48.265,2.752)
O2': (-26.006,48.602,2.741)
N1: (-24.780,44.617,-1.976)
N2: (-26.706,45.844,-2.386)
N3: (-25.247,46.637,-0.799)
N7: (-22.107,45.433,0.463)
N9: (-23.507,47.141,0.788)
O5': (-20.960,49.918,2.819)
O3': (-24.597,49.895,4.513)
Image (generated by PyMOL):