ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:071:088

Extra

PDB:
ATOM 1 O3' A A 70 26.999 160.243 25.422 1.00 49.51 O
ATOM 2 P G A 71 26.215 159.937 26.782 1.00 52.35 P
ATOM 3 OP1 G A 71 24.958 159.205 26.458 1.00 51.70 O
ATOM 4 OP2 G A 71 26.155 161.200 27.556 1.00 49.24 O
ATOM 5 O5' G A 71 27.173 158.916 27.540 1.00 52.48 O
ATOM 6 C5' G A 71 28.253 159.381 28.372 1.00 50.43 C
ATOM 7 C4' G A 71 29.580 159.036 27.735 1.00 49.37 C
ATOM 8 O4' G A 71 29.746 159.796 26.501 1.00 47.06 O
ATOM 9 C3' G A 71 30.815 159.365 28.560 1.00 47.00 C
ATOM 10 O3' G A 71 31.106 158.336 29.498 1.00 46.14 O
ATOM 11 C2' G A 71 31.867 159.533 27.475 1.00 45.74 C
ATOM 12 O2' G A 71 32.267 158.298 26.916 1.00 45.60 O
ATOM 13 C1' G A 71 31.063 160.322 26.438 1.00 44.45 C
ATOM 14 N9 G A 71 31.003 161.736 26.808 1.00 42.59 N
ATOM 15 C8 G A 71 29.908 162.438 27.255 1.00 40.52 C
ATOM 16 N7 G A 71 30.186 163.671 27.577 1.00 39.95 N
ATOM 17 C5 G A 71 31.543 163.797 27.314 1.00 40.90 C
ATOM 18 C6 G A 71 32.415 164.907 27.484 1.00 43.37 C
ATOM 19 O6 G A 71 32.153 166.036 27.928 1.00 46.40 O
ATOM 20 N1 G A 71 33.714 164.603 27.084 1.00 41.58 N
ATOM 21 C2 G A 71 34.122 163.389 26.590 1.00 41.66 C
ATOM 22 N2 G A 71 35.416 163.287 26.250 1.00 41.41 N
ATOM 23 N3 G A 71 33.323 162.347 26.437 1.00 41.05 N
ATOM 24 C4 G A 71 32.057 162.620 26.817 1.00 41.57 C
ATOM 25 P C A 72 31.557 158.721 30.994 1.00 45.37 P
ATOM 26 OP1 C A 72 31.366 157.506 31.830 1.00 46.31 O
ATOM 27 OP2 C A 72 30.884 159.987 31.382 1.00 41.30 O
ATOM 28 O5' C A 72 33.123 158.986 30.861 1.00 44.14 O
TER

ATOM 1 O3' G B 87 37.358 159.769 17.783 1.00 57.66 O
ATOM 2 P A B 88 38.701 158.965 18.131 1.00 56.71 P
ATOM 3 OP1 A B 88 39.772 159.371 17.181 1.00 57.99 O
ATOM 4 OP2 A B 88 38.349 157.535 18.257 1.00 57.06 O
ATOM 5 O5' A B 88 39.084 159.508 19.577 1.00 56.08 O
ATOM 6 C5' A B 88 39.865 160.705 19.739 1.00 53.29 C
ATOM 7 C4' A B 88 39.662 161.271 21.122 1.00 52.57 C
ATOM 8 O4' A B 88 38.308 161.785 21.241 1.00 53.09 O
ATOM 9 C3' A B 88 39.776 160.265 22.255 1.00 51.96 C
ATOM 10 O3' A B 88 41.123 160.011 22.630 1.00 52.65 O
ATOM 11 C2' A B 88 38.975 160.944 23.353 1.00 51.94 C
ATOM 12 O2' A B 88 39.691 161.994 23.969 1.00 51.96 O
ATOM 13 C1' A B 88 37.814 161.528 22.548 1.00 51.90 C
ATOM 14 N9 A B 88 36.709 160.576 22.441 1.00 51.35 N
ATOM 15 C8 A B 88 36.304 159.866 21.335 1.00 51.44 C
ATOM 16 N7 A B 88 35.298 159.059 21.564 1.00 52.29 N
ATOM 17 C5 A B 88 35.015 159.252 22.908 1.00 52.62 C
ATOM 18 C6 A B 88 34.056 158.680 23.767 1.00 52.85 C
ATOM 19 N6 A B 88 33.177 157.753 23.384 1.00 54.59 N
ATOM 20 N1 A B 88 34.034 159.097 25.051 1.00 53.12 N
ATOM 21 C2 A B 88 34.924 160.020 25.441 1.00 54.18 C
ATOM 22 N3 A B 88 35.877 160.628 24.731 1.00 53.95 N
ATOM 23 C4 A B 88 35.869 160.193 23.458 1.00 52.64 C
ATOM 24 P A B 89 41.562 158.523 23.046 1.00 52.91 P
ATOM 25 OP1 A B 89 42.950 158.587 23.561 1.00 54.02 O
ATOM 26 OP2 A B 89 41.249 157.614 21.918 1.00 53.77 O
ATOM 27 O5' A B 89 40.590 158.169 24.261 1.00 52.65 O
TER

Atoms:
OP1: (24.958,159.205,26.458)
OP2: (26.155,161.200,27.556)
C3': (30.815,159.365,28.560)
C1': (31.063,160.322,26.438)
C5': (28.253,159.381,28.372)
O6: (32.153,166.036,27.928)
O4': (29.746,159.796,26.501)
C8: (29.908,162.438,27.255)
C2: (34.122,163.389,26.590)
C6: (32.415,164.907,27.484)
C5: (31.543,163.797,27.314)
C4: (32.057,162.620,26.817)
P: (26.215,159.937,26.782)
C4': (29.580,159.036,27.735)
C2': (31.867,159.533,27.475)
O2': (32.267,158.298,26.916)
N1: (33.714,164.603,27.084)
N2: (35.416,163.287,26.250)
N3: (33.323,162.347,26.437)
N7: (30.186,163.671,27.577)
N9: (31.003,161.736,26.808)
O5': (27.173,158.916,27.540)
O3': (31.106,158.336,29.498)
OP1: (39.772,159.371,17.181)
OP2: (38.349,157.535,18.257)
C3': (39.776,160.265,22.255)
C1': (37.814,161.528,22.548)
C5': (39.865,160.705,19.739)
O4': (38.308,161.785,21.241)
C8: (36.304,159.866,21.335)
O2': (39.691,161.994,23.969)
C6: (34.056,158.680,23.767)
C5: (35.015,159.252,22.908)
C4: (35.869,160.193,23.458)
P: (38.701,158.965,18.131)
C4': (39.662,161.271,21.122)
C2': (38.975,160.944,23.353)
C2: (34.924,160.020,25.441)
N1: (34.034,159.097,25.051)
N3: (35.877,160.628,24.731)
N6: (33.177,157.753,23.384)
N7: (35.298,159.059,21.564)
N9: (36.709,160.576,22.441)
O5': (39.084,159.508,19.577)
O3': (41.123,160.011,22.630)
Image (generated by PyMOL):
PyMOL image
show in jmol