ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:02014:01038

Extra

PDB:
ATOM 1 O3' A A2013 45.475 117.116 118.274 1.00 32.73 O
ATOM 2 P G A2014 46.225 116.260 117.175 1.00 32.03 P
ATOM 3 OP1 G A2014 47.152 115.342 117.872 1.00 34.66 O
ATOM 4 OP2 G A2014 46.731 117.199 116.148 1.00 30.75 O
ATOM 5 O5' G A2014 45.079 115.360 116.553 1.00 32.21 O
ATOM 6 C5' G A2014 44.289 114.502 117.384 1.00 29.40 C
ATOM 7 C4' G A2014 43.095 113.995 116.616 1.00 27.68 C
ATOM 8 O4' G A2014 42.270 115.121 116.251 1.00 27.24 O
ATOM 9 C3' G A2014 43.382 113.331 115.277 1.00 27.87 C
ATOM 10 O3' G A2014 43.774 111.976 115.431 1.00 29.13 O
ATOM 11 C2' G A2014 42.035 113.451 114.597 1.00 26.66 C
ATOM 12 O2' G A2014 41.073 112.549 115.112 1.00 24.09 O
ATOM 13 C1' G A2014 41.650 114.863 115.013 1.00 27.33 C
ATOM 14 N9 G A2014 42.148 115.818 114.039 1.00 28.55 N
ATOM 15 C8 G A2014 43.214 116.662 114.145 1.00 29.16 C
ATOM 16 N7 G A2014 43.399 117.381 113.078 1.00 29.68 N
ATOM 17 C5 G A2014 42.391 116.978 112.220 1.00 30.74 C
ATOM 18 C6 G A2014 42.070 117.398 110.903 1.00 31.68 C
ATOM 19 O6 G A2014 42.642 118.244 110.205 1.00 33.71 O
ATOM 20 N1 G A2014 40.959 116.722 110.410 1.00 29.89 N
ATOM 21 C2 G A2014 40.249 115.775 111.099 1.00 31.07 C
ATOM 22 N2 G A2014 39.209 115.211 110.491 1.00 33.93 N
ATOM 23 N3 G A2014 40.534 115.391 112.312 1.00 31.95 N
ATOM 24 C4 G A2014 41.612 116.023 112.808 1.00 30.54 C
ATOM 25 P U A2015 44.762 111.303 114.375 1.00 27.41 P
ATOM 26 OP1 U A2015 45.163 109.969 114.890 1.00 24.42 O
ATOM 27 OP2 U A2015 45.791 112.310 114.059 1.00 29.01 O
ATOM 28 O5' U A2015 43.885 111.166 113.052 1.00 28.47 O
TER

ATOM 1 O3' A B1037 31.679 109.646 111.427 1.00 35.49 O
ATOM 2 P A B1038 32.222 108.685 110.275 1.00 38.66 P
ATOM 3 OP1 A B1038 31.065 108.274 109.436 1.00 40.58 O
ATOM 4 OP2 A B1038 33.058 107.633 110.892 1.00 39.88 O
ATOM 5 O5' A B1038 33.218 109.592 109.434 1.00 36.21 O
ATOM 6 C5' A B1038 32.824 110.857 108.919 1.00 37.05 C
ATOM 7 C4' A B1038 34.045 111.696 108.661 1.00 38.85 C
ATOM 8 O4' A B1038 34.705 111.870 109.924 1.00 39.37 O
ATOM 9 C3' A B1038 35.093 111.052 107.758 1.00 39.72 C
ATOM 10 O3' A B1038 34.856 111.442 106.406 1.00 40.67 O
ATOM 11 C2' A B1038 36.401 111.660 108.245 1.00 38.85 C
ATOM 12 O2' A B1038 36.718 112.870 107.611 1.00 39.10 O
ATOM 13 C1' A B1038 36.093 111.939 109.719 1.00 39.63 C
ATOM 14 N9 A B1038 36.743 111.094 110.711 1.00 39.49 N
ATOM 15 C8 A B1038 36.646 109.730 110.873 1.00 40.71 C
ATOM 16 N7 A B1038 37.381 109.266 111.858 1.00 40.71 N
ATOM 17 C5 A B1038 37.988 110.402 112.385 1.00 37.94 C
ATOM 18 C6 A B1038 38.860 110.582 113.446 1.00 35.22 C
ATOM 19 N6 A B1038 39.338 109.582 114.177 1.00 35.57 N
ATOM 20 N1 A B1038 39.241 111.834 113.734 1.00 33.19 N
ATOM 21 C2 A B1038 38.786 112.836 112.971 1.00 34.54 C
ATOM 22 N3 A B1038 37.983 112.797 111.934 1.00 34.91 N
ATOM 23 C4 A B1038 37.602 111.533 111.690 1.00 38.23 C
ATOM 24 P C B1039 34.705 110.339 105.258 1.00 42.44 P
ATOM 25 OP1 C B1039 34.657 111.103 103.990 1.00 40.17 O
ATOM 26 OP2 C B1039 33.627 109.347 105.591 1.00 41.53 O
ATOM 27 O5' C B1039 36.071 109.547 105.319 1.00 46.47 O
TER

Atoms:
OP1: (47.152,115.342,117.872)
OP2: (46.731,117.199,116.148)
C3': (43.382,113.331,115.277)
C1': (41.650,114.863,115.013)
C5': (44.289,114.502,117.384)
O6: (42.642,118.244,110.205)
O4': (42.270,115.121,116.251)
C8: (43.214,116.662,114.145)
C2: (40.249,115.775,111.099)
C6: (42.070,117.398,110.903)
C5: (42.391,116.978,112.220)
C4: (41.612,116.023,112.808)
P: (46.225,116.260,117.175)
C4': (43.095,113.995,116.616)
C2': (42.035,113.451,114.597)
O2': (41.073,112.549,115.112)
N1: (40.959,116.722,110.410)
N2: (39.209,115.211,110.491)
N3: (40.534,115.391,112.312)
N7: (43.399,117.381,113.078)
N9: (42.148,115.818,114.039)
O5': (45.079,115.360,116.553)
O3': (43.774,111.976,115.431)
OP1: (31.065,108.274,109.436)
OP2: (33.058,107.633,110.892)
C3': (35.093,111.052,107.758)
C1': (36.093,111.939,109.719)
C5': (32.824,110.857,108.919)
O4': (34.705,111.870,109.924)
C8: (36.646,109.730,110.873)
O2': (36.718,112.870,107.611)
C6: (38.860,110.582,113.446)
C5: (37.988,110.402,112.385)
C4: (37.602,111.533,111.690)
P: (32.222,108.685,110.275)
C4': (34.045,111.696,108.661)
C2': (36.401,111.660,108.245)
C2: (38.786,112.836,112.971)
N1: (39.241,111.834,113.734)
N3: (37.983,112.797,111.934)
N6: (39.338,109.582,114.177)
N7: (37.381,109.266,111.858)
N9: (36.743,111.094,110.711)
O5': (33.218,109.592,109.434)
O3': (34.856,111.442,106.406)
Image (generated by PyMOL):
PyMOL image
show in jmol