ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:071:088

Extra

PDB:
ATOM 1 O3' A A 70 27.466 160.335 25.672 1.00 60.28 O
ATOM 2 P G A 71 26.529 160.039 26.944 1.00 62.12 P
ATOM 3 OP1 G A 71 25.363 159.227 26.490 1.00 61.36 O
ATOM 4 OP2 G A 71 26.304 161.328 27.645 1.00 59.86 O
ATOM 5 O5' G A 71 27.418 159.104 27.882 1.00 61.52 O
ATOM 6 C5' G A 71 28.537 159.628 28.636 1.00 58.56 C
ATOM 7 C4' G A 71 29.833 159.292 27.931 1.00 57.69 C
ATOM 8 O4' G A 71 29.931 160.092 26.717 1.00 56.18 O
ATOM 9 C3' G A 71 31.123 159.602 28.677 1.00 56.89 C
ATOM 10 O3' G A 71 31.483 158.588 29.608 1.00 57.98 O
ATOM 11 C2' G A 71 32.103 159.761 27.528 1.00 54.43 C
ATOM 12 O2' G A 71 32.423 158.527 26.916 1.00 52.63 O
ATOM 13 C1' G A 71 31.251 160.592 26.573 1.00 53.61 C
ATOM 14 N9 G A 71 31.253 162.000 26.972 1.00 51.75 N
ATOM 15 C8 G A 71 30.199 162.742 27.459 1.00 49.59 C
ATOM 16 N7 G A 71 30.535 163.966 27.768 1.00 47.77 N
ATOM 17 C5 G A 71 31.886 164.038 27.461 1.00 49.27 C
ATOM 18 C6 G A 71 32.798 165.109 27.592 1.00 50.64 C
ATOM 19 O6 G A 71 32.589 166.249 28.025 1.00 54.79 O
ATOM 20 N1 G A 71 34.073 164.753 27.160 1.00 50.40 N
ATOM 21 C2 G A 71 34.424 163.520 26.663 1.00 50.95 C
ATOM 22 N2 G A 71 35.710 163.360 26.294 1.00 50.21 N
ATOM 23 N3 G A 71 33.580 162.514 26.538 1.00 49.66 N
ATOM 24 C4 G A 71 32.340 162.840 26.954 1.00 50.18 C
ATOM 25 P C A 72 31.916 159.004 31.102 1.00 57.18 P
ATOM 26 OP1 C A 72 31.664 157.829 31.970 1.00 56.89 O
ATOM 27 OP2 C A 72 31.271 160.304 31.426 1.00 56.28 O
ATOM 28 O5' C A 72 33.488 159.238 30.984 1.00 55.91 O
TER

ATOM 1 O3' G B 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 2 P A B 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 3 OP1 A B 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 4 OP2 A B 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 5 O5' A B 88 39.503 159.580 19.720 1.00 74.09 O
ATOM 6 C5' A B 88 40.322 160.747 19.903 1.00 71.63 C
ATOM 7 C4' A B 88 40.027 161.382 21.236 1.00 70.91 C
ATOM 8 O4' A B 88 38.645 161.839 21.259 1.00 71.94 O
ATOM 9 C3' A B 88 40.117 160.448 22.429 1.00 70.09 C
ATOM 10 O3' A B 88 41.454 160.257 22.872 1.00 68.40 O
ATOM 11 C2' A B 88 39.241 161.160 23.448 1.00 70.79 C
ATOM 12 O2' A B 88 39.889 162.269 24.038 1.00 71.60 O
ATOM 13 C1' A B 88 38.100 161.655 22.557 1.00 71.04 C
ATOM 14 N9 A B 88 37.029 160.665 22.460 1.00 71.23 N
ATOM 15 C8 A B 88 36.742 159.855 21.391 1.00 71.53 C
ATOM 16 N7 A B 88 35.747 159.031 21.603 1.00 73.26 N
ATOM 17 C5 A B 88 35.339 159.322 22.899 1.00 73.09 C
ATOM 18 C6 A B 88 34.321 158.782 23.723 1.00 72.57 C
ATOM 19 N6 A B 88 33.511 157.785 23.347 1.00 70.93 N
ATOM 20 N1 A B 88 34.173 159.304 24.962 1.00 72.01 N
ATOM 21 C2 A B 88 35.002 160.289 25.345 1.00 72.54 C
ATOM 22 N3 A B 88 36.000 160.871 24.669 1.00 72.65 N
ATOM 23 C4 A B 88 36.116 160.337 23.437 1.00 72.57 C
ATOM 24 P A B 89 41.944 158.784 23.283 1.00 67.76 P
ATOM 25 OP1 A B 89 43.351 158.875 23.747 1.00 68.66 O
ATOM 26 OP2 A B 89 41.604 157.859 22.175 1.00 68.74 O
ATOM 27 O5' A B 89 41.020 158.404 24.527 1.00 68.87 O
TER

Atoms:
OP1: (25.363,159.227,26.490)
OP2: (26.304,161.328,27.645)
C3': (31.123,159.602,28.677)
C1': (31.251,160.592,26.573)
C5': (28.537,159.628,28.636)
O6: (32.589,166.249,28.025)
O4': (29.931,160.092,26.717)
C8: (30.199,162.742,27.459)
C2: (34.424,163.520,26.663)
C6: (32.798,165.109,27.592)
C5: (31.886,164.038,27.461)
C4: (32.340,162.840,26.954)
P: (26.529,160.039,26.944)
C4': (29.833,159.292,27.931)
C2': (32.103,159.761,27.528)
O2': (32.423,158.527,26.916)
N1: (34.073,164.753,27.160)
N2: (35.710,163.360,26.294)
N3: (33.580,162.514,26.538)
N7: (30.535,163.966,27.768)
N9: (31.253,162.000,26.972)
O5': (27.418,159.104,27.882)
O3': (31.483,158.588,29.608)
OP1: (40.115,159.507,17.297)
OP2: (38.621,157.706,18.346)
C3': (40.117,160.448,22.429)
C1': (38.100,161.655,22.557)
C5': (40.322,160.747,19.903)
O4': (38.645,161.839,21.259)
C8: (36.742,159.855,21.391)
O2': (39.889,162.269,24.038)
C6: (34.321,158.782,23.723)
C5: (35.339,159.322,22.899)
C4: (36.116,160.337,23.437)
P: (39.052,159.118,18.266)
C4': (40.027,161.382,21.236)
C2': (39.241,161.160,23.448)
C2: (35.002,160.289,25.345)
N1: (34.173,159.304,24.962)
N3: (36.000,160.871,24.669)
N6: (33.511,157.785,23.347)
N7: (35.747,159.031,21.603)
N9: (37.029,160.665,22.460)
O5': (39.503,159.580,19.720)
O3': (41.454,160.257,22.872)
Image (generated by PyMOL):
PyMOL image
show in jmol