Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1108:A1109
Extra
PDB:
ATOM 1 O3' C A1107 35.753 75.841 172.876 1.00 73.42 O
ATOM 2 P U A1108 34.712 74.682 173.301 1.00 72.17 P
ATOM 3 OP1 U A1108 35.469 73.614 174.005 1.00 73.28 O
ATOM 4 OP2 U A1108 33.887 74.321 172.123 1.00 72.33 O
ATOM 5 O5' U A1108 33.761 75.398 174.364 1.00 71.92 O
ATOM 6 C5' U A1108 33.189 76.706 174.106 1.00 74.00 C
ATOM 7 C4' U A1108 32.188 77.051 175.185 1.00 75.86 C
ATOM 8 O4' U A1108 31.735 78.435 175.071 1.00 76.69 O
ATOM 9 C3' U A1108 30.932 76.189 175.182 1.00 77.25 C
ATOM 10 O3' U A1108 30.542 75.932 176.526 1.00 77.43 O
ATOM 11 C2' U A1108 29.912 77.090 174.490 1.00 78.36 C
ATOM 12 O2' U A1108 28.562 76.774 174.798 1.00 79.02 O
ATOM 13 C1' U A1108 30.320 78.458 175.033 1.00 78.84 C
ATOM 14 N1 U A1108 29.878 79.599 174.219 1.00 80.95 N
ATOM 15 C2 U A1108 28.820 80.369 174.696 1.00 82.96 C
ATOM 16 O2 U A1108 28.232 80.129 175.742 1.00 84.10 O
ATOM 17 N3 U A1108 28.470 81.431 173.898 1.00 84.53 N
ATOM 18 C4 U A1108 29.041 81.787 172.691 1.00 84.96 C
ATOM 19 O4 U A1108 28.546 82.715 172.030 1.00 85.66 O
ATOM 20 C5 U A1108 30.119 80.936 172.271 1.00 83.75 C
ATOM 21 C6 U A1108 30.487 79.900 173.030 1.00 81.64 C
ATOM 22 P A A1109 30.592 74.432 177.100 1.00 77.60 P
ATOM 23 OP1 A A1109 30.252 73.505 175.984 1.00 77.50 O
ATOM 24 OP2 A A1109 29.775 74.429 178.336 1.00 77.78 O
ATOM 25 O5' A A1109 32.108 74.224 177.524 1.00 76.16 O
TER
ATOM 1 O3' U B1108 30.542 75.932 176.526 1.00 77.43 O
ATOM 2 P A B1109 30.592 74.432 177.100 1.00 77.60 P
ATOM 3 OP1 A B1109 30.252 73.505 175.984 1.00 77.50 O
ATOM 4 OP2 A B1109 29.775 74.429 178.336 1.00 77.78 O
ATOM 5 O5' A B1109 32.108 74.224 177.524 1.00 76.16 O
ATOM 6 C5' A B1109 32.645 74.913 178.655 1.00 74.20 C
ATOM 7 C4' A B1109 34.033 74.395 178.949 1.00 72.70 C
ATOM 8 O4' A B1109 33.919 73.018 179.385 1.00 71.85 O
ATOM 9 C3' A B1109 35.015 74.379 177.773 1.00 71.53 C
ATOM 10 O3' A B1109 36.358 74.555 178.241 1.00 70.03 O
ATOM 11 C2' A B1109 34.880 72.949 177.271 1.00 71.50 C
ATOM 12 O2' A B1109 36.010 72.426 176.615 1.00 71.99 O
ATOM 13 C1' A B1109 34.729 72.205 178.580 1.00 72.57 C
ATOM 14 N9 A B1109 34.099 70.901 178.427 1.00 75.18 N
ATOM 15 C8 A B1109 32.904 70.566 177.831 1.00 76.11 C
ATOM 16 N7 A B1109 32.634 69.286 177.881 1.00 76.59 N
ATOM 17 C5 A B1109 33.721 68.745 178.556 1.00 76.48 C
ATOM 18 C6 A B1109 34.028 67.440 178.950 1.00 76.91 C
ATOM 19 N6 A B1109 33.233 66.394 178.716 1.00 77.73 N
ATOM 20 N1 A B1109 35.192 67.238 179.607 1.00 76.48 N
ATOM 21 C2 A B1109 35.982 68.288 179.850 1.00 75.55 C
ATOM 22 N3 A B1109 35.798 69.561 179.537 1.00 75.66 N
ATOM 23 C4 A B1109 34.633 69.725 178.885 1.00 75.81 C
ATOM 24 P G B1110 37.007 76.031 178.327 1.00 67.97 P
ATOM 25 OP1 G B1110 38.382 75.950 177.826 1.00 66.23 O
ATOM 26 OP2 G B1110 36.755 76.583 179.671 1.00 68.57 O
ATOM 27 O5' G B1110 36.187 76.908 177.289 1.00 69.89 O
TER
ATOM 2 P U A1108 34.712 74.682 173.301 1.00 72.17 P
ATOM 3 OP1 U A1108 35.469 73.614 174.005 1.00 73.28 O
ATOM 4 OP2 U A1108 33.887 74.321 172.123 1.00 72.33 O
ATOM 5 O5' U A1108 33.761 75.398 174.364 1.00 71.92 O
ATOM 6 C5' U A1108 33.189 76.706 174.106 1.00 74.00 C
ATOM 7 C4' U A1108 32.188 77.051 175.185 1.00 75.86 C
ATOM 8 O4' U A1108 31.735 78.435 175.071 1.00 76.69 O
ATOM 9 C3' U A1108 30.932 76.189 175.182 1.00 77.25 C
ATOM 10 O3' U A1108 30.542 75.932 176.526 1.00 77.43 O
ATOM 11 C2' U A1108 29.912 77.090 174.490 1.00 78.36 C
ATOM 12 O2' U A1108 28.562 76.774 174.798 1.00 79.02 O
ATOM 13 C1' U A1108 30.320 78.458 175.033 1.00 78.84 C
ATOM 14 N1 U A1108 29.878 79.599 174.219 1.00 80.95 N
ATOM 15 C2 U A1108 28.820 80.369 174.696 1.00 82.96 C
ATOM 16 O2 U A1108 28.232 80.129 175.742 1.00 84.10 O
ATOM 17 N3 U A1108 28.470 81.431 173.898 1.00 84.53 N
ATOM 18 C4 U A1108 29.041 81.787 172.691 1.00 84.96 C
ATOM 19 O4 U A1108 28.546 82.715 172.030 1.00 85.66 O
ATOM 20 C5 U A1108 30.119 80.936 172.271 1.00 83.75 C
ATOM 21 C6 U A1108 30.487 79.900 173.030 1.00 81.64 C
ATOM 22 P A A1109 30.592 74.432 177.100 1.00 77.60 P
ATOM 23 OP1 A A1109 30.252 73.505 175.984 1.00 77.50 O
ATOM 24 OP2 A A1109 29.775 74.429 178.336 1.00 77.78 O
ATOM 25 O5' A A1109 32.108 74.224 177.524 1.00 76.16 O
TER
ATOM 1 O3' U B1108 30.542 75.932 176.526 1.00 77.43 O
ATOM 2 P A B1109 30.592 74.432 177.100 1.00 77.60 P
ATOM 3 OP1 A B1109 30.252 73.505 175.984 1.00 77.50 O
ATOM 4 OP2 A B1109 29.775 74.429 178.336 1.00 77.78 O
ATOM 5 O5' A B1109 32.108 74.224 177.524 1.00 76.16 O
ATOM 6 C5' A B1109 32.645 74.913 178.655 1.00 74.20 C
ATOM 7 C4' A B1109 34.033 74.395 178.949 1.00 72.70 C
ATOM 8 O4' A B1109 33.919 73.018 179.385 1.00 71.85 O
ATOM 9 C3' A B1109 35.015 74.379 177.773 1.00 71.53 C
ATOM 10 O3' A B1109 36.358 74.555 178.241 1.00 70.03 O
ATOM 11 C2' A B1109 34.880 72.949 177.271 1.00 71.50 C
ATOM 12 O2' A B1109 36.010 72.426 176.615 1.00 71.99 O
ATOM 13 C1' A B1109 34.729 72.205 178.580 1.00 72.57 C
ATOM 14 N9 A B1109 34.099 70.901 178.427 1.00 75.18 N
ATOM 15 C8 A B1109 32.904 70.566 177.831 1.00 76.11 C
ATOM 16 N7 A B1109 32.634 69.286 177.881 1.00 76.59 N
ATOM 17 C5 A B1109 33.721 68.745 178.556 1.00 76.48 C
ATOM 18 C6 A B1109 34.028 67.440 178.950 1.00 76.91 C
ATOM 19 N6 A B1109 33.233 66.394 178.716 1.00 77.73 N
ATOM 20 N1 A B1109 35.192 67.238 179.607 1.00 76.48 N
ATOM 21 C2 A B1109 35.982 68.288 179.850 1.00 75.55 C
ATOM 22 N3 A B1109 35.798 69.561 179.537 1.00 75.66 N
ATOM 23 C4 A B1109 34.633 69.725 178.885 1.00 75.81 C
ATOM 24 P G B1110 37.007 76.031 178.327 1.00 67.97 P
ATOM 25 OP1 G B1110 38.382 75.950 177.826 1.00 66.23 O
ATOM 26 OP2 G B1110 36.755 76.583 179.671 1.00 68.57 O
ATOM 27 O5' G B1110 36.187 76.908 177.289 1.00 69.89 O
TER
Atoms:
C4: (29.041,81.787,172.691)
N3: (28.470,81.431,173.898)
OP1: (35.469,73.614,174.005)
OP2: (33.887,74.321,172.123)
C2: (28.820,80.369,174.696)
C1': (30.320,78.458,175.033)
C3': (30.932,76.189,175.182)
O5': (33.761,75.398,174.364)
O4': (31.735,78.435,175.071)
C5': (33.189,76.706,174.106)
P: (34.712,74.682,173.301)
C4': (32.188,77.051,175.185)
C2': (29.912,77.090,174.490)
O2': (28.562,76.774,174.798)
N1: (29.878,79.599,174.219)
O4: (28.546,82.715,172.030)
O2: (28.232,80.129,175.742)
C6: (30.487,79.900,173.030)
C5: (30.119,80.936,172.271)
O3': (30.542,75.932,176.526)
N3: (28.470,81.431,173.898)
OP1: (35.469,73.614,174.005)
OP2: (33.887,74.321,172.123)
C2: (28.820,80.369,174.696)
C1': (30.320,78.458,175.033)
C3': (30.932,76.189,175.182)
O5': (33.761,75.398,174.364)
O4': (31.735,78.435,175.071)
C5': (33.189,76.706,174.106)
P: (34.712,74.682,173.301)
C4': (32.188,77.051,175.185)
C2': (29.912,77.090,174.490)
O2': (28.562,76.774,174.798)
N1: (29.878,79.599,174.219)
O4: (28.546,82.715,172.030)
O2: (28.232,80.129,175.742)
C6: (30.487,79.900,173.030)
C5: (30.119,80.936,172.271)
O3': (30.542,75.932,176.526)
OP1: (30.252,73.505,175.984)
OP2: (29.775,74.429,178.336)
C3': (35.015,74.379,177.773)
C1': (34.729,72.205,178.580)
C5': (32.645,74.913,178.655)
O4': (33.919,73.018,179.385)
C8: (32.904,70.566,177.831)
O2': (36.010,72.426,176.615)
C6: (34.028,67.440,178.950)
C5: (33.721,68.745,178.556)
C4: (34.633,69.725,178.885)
P: (30.592,74.432,177.100)
C4': (34.033,74.395,178.949)
C2': (34.880,72.949,177.271)
C2: (35.982,68.288,179.850)
N1: (35.192,67.238,179.607)
N3: (35.798,69.561,179.537)
N6: (33.233,66.394,178.716)
N7: (32.634,69.286,177.881)
N9: (34.099,70.901,178.427)
O5': (32.108,74.224,177.524)
O3': (36.358,74.555,178.241)
OP2: (29.775,74.429,178.336)
C3': (35.015,74.379,177.773)
C1': (34.729,72.205,178.580)
C5': (32.645,74.913,178.655)
O4': (33.919,73.018,179.385)
C8: (32.904,70.566,177.831)
O2': (36.010,72.426,176.615)
C6: (34.028,67.440,178.950)
C5: (33.721,68.745,178.556)
C4: (34.633,69.725,178.885)
P: (30.592,74.432,177.100)
C4': (34.033,74.395,178.949)
C2': (34.880,72.949,177.271)
C2: (35.982,68.288,179.850)
N1: (35.192,67.238,179.607)
N3: (35.798,69.561,179.537)
N6: (33.233,66.394,178.716)
N7: (32.634,69.286,177.881)
N9: (34.099,70.901,178.427)
O5': (32.108,74.224,177.524)
O3': (36.358,74.555,178.241)
Image (generated by PyMOL):