ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:01067:01061

Extra

PDB:
ATOM 1 O3' A A1066 11.394 103.661 120.874 1.00 37.22 O
ATOM 2 P G A1067 10.855 104.499 122.144 1.00 38.57 P
ATOM 3 OP1 G A1067 9.804 103.646 122.754 1.00 36.26 O
ATOM 4 OP2 G A1067 10.521 105.890 121.730 1.00 35.53 O
ATOM 5 O5' G A1067 12.091 104.553 123.147 1.00 35.13 O
ATOM 6 C5' G A1067 12.780 103.355 123.515 1.00 33.48 C
ATOM 7 C4' G A1067 12.639 103.094 124.999 1.00 33.94 C
ATOM 8 O4' G A1067 13.086 101.744 125.266 1.00 33.68 O
ATOM 9 C3' G A1067 13.456 103.982 125.927 1.00 35.18 C
ATOM 10 O3' G A1067 12.866 103.957 127.229 1.00 37.84 O
ATOM 11 C2' G A1067 14.757 103.198 126.021 1.00 35.68 C
ATOM 12 O2' G A1067 15.507 103.523 127.170 1.00 37.14 O
ATOM 13 C1' G A1067 14.208 101.778 126.112 1.00 33.82 C
ATOM 14 N9 G A1067 15.084 100.679 125.730 1.00 34.15 N
ATOM 15 C8 G A1067 16.426 100.718 125.446 1.00 35.70 C
ATOM 16 N7 G A1067 16.929 99.538 125.195 1.00 36.44 N
ATOM 17 C5 G A1067 15.850 98.673 125.307 1.00 34.98 C
ATOM 18 C6 G A1067 15.783 97.266 125.160 1.00 35.94 C
ATOM 19 O6 G A1067 16.700 96.473 124.900 1.00 39.03 O
ATOM 20 N1 G A1067 14.487 96.793 125.358 1.00 35.72 N
ATOM 21 C2 G A1067 13.401 97.579 125.664 1.00 35.77 C
ATOM 22 N2 G A1067 12.233 96.952 125.814 1.00 36.48 N
ATOM 23 N3 G A1067 13.456 98.886 125.809 1.00 34.07 N
ATOM 24 C4 G A1067 14.702 99.363 125.619 1.00 34.50 C
ATOM 25 P U A1068 11.741 105.028 127.640 1.00 41.46 P
ATOM 26 OP1 U A1068 10.584 104.200 128.057 1.00 40.58 O
ATOM 27 OP2 U A1068 11.560 106.065 126.584 1.00 37.86 O
ATOM 28 O5' U A1068 12.329 105.707 128.956 1.00 41.29 O
TER

ATOM 1 O3' U B1060 18.678 104.699 123.933 1.00 33.79 O
ATOM 2 P C B1061 19.030 104.368 125.463 1.00 32.68 P
ATOM 3 OP1 C B1061 20.427 103.886 125.531 1.00 35.58 O
ATOM 4 OP2 C B1061 17.942 103.493 125.966 1.00 34.78 O
ATOM 5 O5' C B1061 18.976 105.789 126.180 1.00 29.63 O
ATOM 6 C5' C B1061 17.766 106.272 126.782 1.00 30.89 C
ATOM 7 C4' C B1061 17.918 107.723 127.162 1.00 31.45 C
ATOM 8 O4' C B1061 19.033 107.854 128.086 1.00 32.09 O
ATOM 9 C3' C B1061 18.282 108.657 126.020 1.00 31.74 C
ATOM 10 O3' C B1061 17.148 109.043 125.256 1.00 34.19 O
ATOM 11 C2' C B1061 18.946 109.817 126.750 1.00 31.63 C
ATOM 12 O2' C B1061 18.050 110.701 127.387 1.00 31.31 O
ATOM 13 C1' C B1061 19.724 109.071 127.833 1.00 30.71 C
ATOM 14 N1 C B1061 21.109 108.763 127.427 1.00 28.45 N
ATOM 15 C2 C B1061 22.039 109.814 127.348 1.00 28.76 C
ATOM 16 O2 C B1061 21.659 110.975 127.573 1.00 27.33 O
ATOM 17 N3 C B1061 23.323 109.537 127.024 1.00 28.45 N
ATOM 18 C4 C B1061 23.691 108.278 126.773 1.00 29.96 C
ATOM 19 N4 C B1061 24.972 108.048 126.484 1.00 28.96 N
ATOM 20 C5 C B1061 22.762 107.197 126.814 1.00 28.67 C
ATOM 21 C6 C B1061 21.494 107.482 127.142 1.00 27.82 C
ATOM 22 P C B1062 17.340 109.521 123.734 1.00 34.81 P
ATOM 23 OP1 C B1062 16.007 109.730 123.137 1.00 36.37 O
ATOM 24 OP2 C B1062 18.298 108.603 123.065 1.00 34.86 O
ATOM 25 O5' C B1062 18.023 110.952 123.885 1.00 35.27 O
TER

Atoms:
OP1: (9.804,103.646,122.754)
OP2: (10.521,105.890,121.730)
C3': (13.456,103.982,125.927)
C1': (14.208,101.778,126.112)
C5': (12.780,103.355,123.515)
O6: (16.700,96.473,124.900)
O4': (13.086,101.744,125.266)
C8: (16.426,100.718,125.446)
C2: (13.401,97.579,125.664)
C6: (15.783,97.266,125.160)
C5: (15.850,98.673,125.307)
C4: (14.702,99.363,125.619)
P: (10.855,104.499,122.144)
C4': (12.639,103.094,124.999)
C2': (14.757,103.198,126.021)
O2': (15.507,103.523,127.170)
N1: (14.487,96.793,125.358)
N2: (12.233,96.952,125.814)
N3: (13.456,98.886,125.809)
N7: (16.929,99.538,125.195)
N9: (15.084,100.679,125.730)
O5': (12.091,104.553,123.147)
O3': (12.866,103.957,127.229)
C2: (22.039,109.814,127.348)
OP1: (20.427,103.886,125.531)
OP2: (17.942,103.493,125.966)
C4: (23.691,108.278,126.773)
O5': (18.976,105.789,126.180)
C3': (18.282,108.657,126.020)
C1': (19.724,109.071,127.833)
O4': (19.033,107.854,128.086)
C5': (17.766,106.272,126.782)
P: (19.030,104.368,125.463)
O2: (21.659,110.975,127.573)
C4': (17.918,107.723,127.162)
C2': (18.946,109.817,126.750)
O2': (18.050,110.701,127.387)
N1: (21.109,108.763,127.427)
N3: (23.323,109.537,127.024)
N4: (24.972,108.048,126.484)
C6: (21.494,107.482,127.142)
C5: (22.762,107.197,126.814)
O3': (17.148,109.043,125.256)
Image (generated by PyMOL):
PyMOL image
show in jmol