ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:02014:01038

Extra

PDB:
ATOM 1 O3' A A2013 45.550 117.189 118.576 1.00 37.16 O
ATOM 2 P G A2014 46.301 116.300 117.491 1.00 35.60 P
ATOM 3 OP1 G A2014 47.163 115.333 118.222 1.00 37.00 O
ATOM 4 OP2 G A2014 46.893 117.210 116.484 1.00 35.26 O
ATOM 5 O5' G A2014 45.123 115.477 116.815 1.00 37.67 O
ATOM 6 C5' G A2014 44.357 114.551 117.583 1.00 34.37 C
ATOM 7 C4' G A2014 43.138 114.107 116.813 1.00 35.15 C
ATOM 8 O4' G A2014 42.340 115.268 116.451 1.00 34.81 O
ATOM 9 C3' G A2014 43.367 113.426 115.478 1.00 34.23 C
ATOM 10 O3' G A2014 43.721 112.066 115.611 1.00 35.64 O
ATOM 11 C2' G A2014 41.997 113.569 114.840 1.00 35.64 C
ATOM 12 O2' G A2014 41.064 112.685 115.430 1.00 32.93 O
ATOM 13 C1' G A2014 41.649 115.003 115.236 1.00 34.94 C
ATOM 14 N9 G A2014 42.098 115.960 114.229 1.00 35.67 N
ATOM 15 C8 G A2014 43.138 116.851 114.334 1.00 35.91 C
ATOM 16 N7 G A2014 43.292 117.586 113.268 1.00 35.66 N
ATOM 17 C5 G A2014 42.293 117.153 112.405 1.00 36.13 C
ATOM 18 C6 G A2014 41.953 117.590 111.094 1.00 36.07 C
ATOM 19 O6 G A2014 42.488 118.473 110.409 1.00 37.78 O
ATOM 20 N1 G A2014 40.872 116.887 110.587 1.00 34.24 N
ATOM 21 C2 G A2014 40.204 115.890 111.244 1.00 37.65 C
ATOM 22 N2 G A2014 39.185 115.330 110.580 1.00 37.72 N
ATOM 23 N3 G A2014 40.509 115.469 112.463 1.00 37.89 N
ATOM 24 C4 G A2014 41.554 116.145 112.981 1.00 35.99 C
ATOM 25 P U A2015 44.731 111.404 114.550 1.00 34.67 P
ATOM 26 OP1 U A2015 45.126 110.075 115.071 1.00 37.01 O
ATOM 27 OP2 U A2015 45.779 112.402 114.231 1.00 39.18 O
ATOM 28 O5' U A2015 43.869 111.227 113.223 1.00 36.25 O
TER

ATOM 1 O3' A B1037 31.648 109.831 111.552 1.00 39.55 O
ATOM 2 P A B1038 32.081 108.809 110.392 1.00 40.02 P
ATOM 3 OP1 A B1038 30.863 108.513 109.606 1.00 40.29 O
ATOM 4 OP2 A B1038 32.843 107.690 111.005 1.00 40.63 O
ATOM 5 O5' A B1038 33.094 109.648 109.490 1.00 38.45 O
ATOM 6 C5' A B1038 32.748 110.953 108.996 1.00 37.67 C
ATOM 7 C4' A B1038 33.991 111.786 108.815 1.00 37.32 C
ATOM 8 O4' A B1038 34.639 111.936 110.098 1.00 37.94 O
ATOM 9 C3' A B1038 35.052 111.170 107.913 1.00 38.33 C
ATOM 10 O3' A B1038 34.796 111.553 106.559 1.00 39.99 O
ATOM 11 C2' A B1038 36.355 111.793 108.424 1.00 37.44 C
ATOM 12 O2' A B1038 36.677 113.032 107.828 1.00 38.77 O
ATOM 13 C1' A B1038 36.037 112.032 109.905 1.00 38.05 C
ATOM 14 N9 A B1038 36.696 111.160 110.870 1.00 38.10 N
ATOM 15 C8 A B1038 36.623 109.794 110.994 1.00 38.07 C
ATOM 16 N7 A B1038 37.331 109.319 111.990 1.00 37.88 N
ATOM 17 C5 A B1038 37.911 110.450 112.555 1.00 35.51 C
ATOM 18 C6 A B1038 38.771 110.625 113.644 1.00 32.28 C
ATOM 19 N6 A B1038 39.238 109.626 114.392 1.00 32.41 N
ATOM 20 N1 A B1038 39.146 111.877 113.946 1.00 31.41 N
ATOM 21 C2 A B1038 38.694 112.881 113.197 1.00 33.04 C
ATOM 22 N3 A B1038 37.893 112.848 112.149 1.00 34.53 N
ATOM 23 C4 A B1038 37.530 111.586 111.875 1.00 35.93 C
ATOM 24 P C B1039 34.534 110.438 105.435 1.00 41.87 P
ATOM 25 OP1 C B1039 34.432 111.176 104.158 1.00 40.48 O
ATOM 26 OP2 C B1039 33.431 109.525 105.855 1.00 41.51 O
ATOM 27 O5' C B1039 35.859 109.568 105.435 1.00 42.97 O
TER

Atoms:
OP1: (47.163,115.333,118.222)
OP2: (46.893,117.210,116.484)
C3': (43.367,113.426,115.478)
C1': (41.649,115.003,115.236)
C5': (44.357,114.551,117.583)
O6: (42.488,118.473,110.409)
O4': (42.340,115.268,116.451)
C8: (43.138,116.851,114.334)
C2: (40.204,115.890,111.244)
C6: (41.953,117.590,111.094)
C5: (42.293,117.153,112.405)
C4: (41.554,116.145,112.981)
P: (46.301,116.300,117.491)
C4': (43.138,114.107,116.813)
C2': (41.997,113.569,114.840)
O2': (41.064,112.685,115.430)
N1: (40.872,116.887,110.587)
N2: (39.185,115.330,110.580)
N3: (40.509,115.469,112.463)
N7: (43.292,117.586,113.268)
N9: (42.098,115.960,114.229)
O5': (45.123,115.477,116.815)
O3': (43.721,112.066,115.611)
OP1: (30.863,108.513,109.606)
OP2: (32.843,107.690,111.005)
C3': (35.052,111.170,107.913)
C1': (36.037,112.032,109.905)
C5': (32.748,110.953,108.996)
O4': (34.639,111.936,110.098)
C8: (36.623,109.794,110.994)
O2': (36.677,113.032,107.828)
C6: (38.771,110.625,113.644)
C5: (37.911,110.450,112.555)
C4: (37.530,111.586,111.875)
P: (32.081,108.809,110.392)
C4': (33.991,111.786,108.815)
C2': (36.355,111.793,108.424)
C2: (38.694,112.881,113.197)
N1: (39.146,111.877,113.946)
N3: (37.893,112.848,112.149)
N6: (39.238,109.626,114.392)
N7: (37.331,109.319,111.990)
N9: (36.696,111.160,110.870)
O5': (33.094,109.648,109.490)
O3': (34.796,111.553,106.559)
Image (generated by PyMOL):
PyMOL image
show in jmol