Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01924:01954
Extra
PDB:
ATOM 1 O3' U A1923 100.222 121.117 111.791 1.00 47.72 O
ATOM 2 P A A1924 99.813 122.567 111.234 1.00 48.58 P
ATOM 3 OP1 A A1924 100.133 123.564 112.293 1.00 49.71 O
ATOM 4 OP2 A A1924 98.427 122.466 110.718 1.00 50.87 O
ATOM 5 O5' A A1924 100.765 122.786 109.976 1.00 46.60 O
ATOM 6 C5' A A1924 101.756 123.817 109.964 1.00 44.80 C
ATOM 7 C4' A A1924 102.364 123.940 108.588 1.00 46.42 C
ATOM 8 O4' A A1924 103.091 122.718 108.277 1.00 45.76 O
ATOM 9 C3' A A1924 101.390 124.164 107.424 1.00 47.63 C
ATOM 10 O3' A A1924 101.953 125.070 106.484 1.00 47.26 O
ATOM 11 C2' A A1924 101.323 122.791 106.772 1.00 46.69 C
ATOM 12 O2' A A1924 101.034 122.845 105.387 1.00 50.56 O
ATOM 13 C1' A A1924 102.752 122.310 106.976 1.00 45.58 C
ATOM 14 N9 A A1924 102.914 120.864 106.856 1.00 45.22 N
ATOM 15 C8 A A1924 101.991 119.877 107.096 1.00 44.06 C
ATOM 16 N7 A A1924 102.415 118.677 106.796 1.00 44.43 N
ATOM 17 C5 A A1924 103.711 118.883 106.349 1.00 44.00 C
ATOM 18 C6 A A1924 104.691 118.005 105.868 1.00 44.17 C
ATOM 19 N6 A A1924 104.505 116.689 105.732 1.00 44.39 N
ATOM 20 N1 A A1924 105.883 118.530 105.519 1.00 44.21 N
ATOM 21 C2 A A1924 106.065 119.850 105.645 1.00 44.32 C
ATOM 22 N3 A A1924 105.216 120.778 106.073 1.00 44.09 N
ATOM 23 C4 A A1924 104.042 120.221 106.411 1.00 44.43 C
ATOM 24 P G A1925 101.337 126.543 106.337 1.00 48.94 P
ATOM 25 OP1 G A1925 102.326 127.414 105.650 1.00 48.62 O
ATOM 26 OP2 G A1925 100.811 126.932 107.675 1.00 45.77 O
ATOM 27 O5' G A1925 100.108 126.356 105.354 1.00 49.13 O
TER
ATOM 1 O3' A B1953 102.985 111.625 102.975 1.00 58.39 O
ATOM 2 P U B1954 104.359 112.315 103.431 1.00 57.43 P
ATOM 3 OP1 U B1954 105.484 111.580 102.795 1.00 55.30 O
ATOM 4 OP2 U B1954 104.344 112.508 104.900 1.00 57.73 O
ATOM 5 O5' U B1954 104.223 113.769 102.808 1.00 56.05 O
ATOM 6 C5' U B1954 104.967 114.147 101.670 1.00 53.66 C
ATOM 7 C4' U B1954 105.474 115.545 101.844 1.00 53.42 C
ATOM 8 O4' U B1954 106.030 115.713 103.172 1.00 54.22 O
ATOM 9 C3' U B1954 106.615 115.851 100.910 1.00 53.50 C
ATOM 10 O3' U B1954 106.116 116.223 99.650 1.00 52.64 O
ATOM 11 C2' U B1954 107.365 116.944 101.647 1.00 54.49 C
ATOM 12 O2' U B1954 106.758 118.212 101.523 1.00 56.38 O
ATOM 13 C1' U B1954 107.235 116.456 103.093 1.00 55.04 C
ATOM 14 N1 U B1954 108.339 115.580 103.524 1.00 56.53 N
ATOM 15 C2 U B1954 109.628 116.092 103.502 1.00 57.50 C
ATOM 16 O2 U B1954 109.886 117.234 103.151 1.00 60.66 O
ATOM 17 N3 U B1954 110.604 115.219 103.910 1.00 56.53 N
ATOM 18 C4 U B1954 110.431 113.921 104.333 1.00 56.23 C
ATOM 19 O4 U B1954 111.415 113.249 104.643 1.00 57.41 O
ATOM 20 C5 U B1954 109.077 113.470 104.335 1.00 56.13 C
ATOM 21 C6 U B1954 108.103 114.290 103.940 1.00 55.57 C
ATOM 22 P G B1955 106.734 115.552 98.348 1.00 53.39 P
ATOM 23 OP1 G B1955 106.026 116.120 97.172 1.00 55.82 O
ATOM 24 OP2 G B1955 106.781 114.076 98.544 1.00 53.27 O
ATOM 25 O5' G B1955 108.223 116.102 98.356 1.00 55.01 O
TER
ATOM 2 P A A1924 99.813 122.567 111.234 1.00 48.58 P
ATOM 3 OP1 A A1924 100.133 123.564 112.293 1.00 49.71 O
ATOM 4 OP2 A A1924 98.427 122.466 110.718 1.00 50.87 O
ATOM 5 O5' A A1924 100.765 122.786 109.976 1.00 46.60 O
ATOM 6 C5' A A1924 101.756 123.817 109.964 1.00 44.80 C
ATOM 7 C4' A A1924 102.364 123.940 108.588 1.00 46.42 C
ATOM 8 O4' A A1924 103.091 122.718 108.277 1.00 45.76 O
ATOM 9 C3' A A1924 101.390 124.164 107.424 1.00 47.63 C
ATOM 10 O3' A A1924 101.953 125.070 106.484 1.00 47.26 O
ATOM 11 C2' A A1924 101.323 122.791 106.772 1.00 46.69 C
ATOM 12 O2' A A1924 101.034 122.845 105.387 1.00 50.56 O
ATOM 13 C1' A A1924 102.752 122.310 106.976 1.00 45.58 C
ATOM 14 N9 A A1924 102.914 120.864 106.856 1.00 45.22 N
ATOM 15 C8 A A1924 101.991 119.877 107.096 1.00 44.06 C
ATOM 16 N7 A A1924 102.415 118.677 106.796 1.00 44.43 N
ATOM 17 C5 A A1924 103.711 118.883 106.349 1.00 44.00 C
ATOM 18 C6 A A1924 104.691 118.005 105.868 1.00 44.17 C
ATOM 19 N6 A A1924 104.505 116.689 105.732 1.00 44.39 N
ATOM 20 N1 A A1924 105.883 118.530 105.519 1.00 44.21 N
ATOM 21 C2 A A1924 106.065 119.850 105.645 1.00 44.32 C
ATOM 22 N3 A A1924 105.216 120.778 106.073 1.00 44.09 N
ATOM 23 C4 A A1924 104.042 120.221 106.411 1.00 44.43 C
ATOM 24 P G A1925 101.337 126.543 106.337 1.00 48.94 P
ATOM 25 OP1 G A1925 102.326 127.414 105.650 1.00 48.62 O
ATOM 26 OP2 G A1925 100.811 126.932 107.675 1.00 45.77 O
ATOM 27 O5' G A1925 100.108 126.356 105.354 1.00 49.13 O
TER
ATOM 1 O3' A B1953 102.985 111.625 102.975 1.00 58.39 O
ATOM 2 P U B1954 104.359 112.315 103.431 1.00 57.43 P
ATOM 3 OP1 U B1954 105.484 111.580 102.795 1.00 55.30 O
ATOM 4 OP2 U B1954 104.344 112.508 104.900 1.00 57.73 O
ATOM 5 O5' U B1954 104.223 113.769 102.808 1.00 56.05 O
ATOM 6 C5' U B1954 104.967 114.147 101.670 1.00 53.66 C
ATOM 7 C4' U B1954 105.474 115.545 101.844 1.00 53.42 C
ATOM 8 O4' U B1954 106.030 115.713 103.172 1.00 54.22 O
ATOM 9 C3' U B1954 106.615 115.851 100.910 1.00 53.50 C
ATOM 10 O3' U B1954 106.116 116.223 99.650 1.00 52.64 O
ATOM 11 C2' U B1954 107.365 116.944 101.647 1.00 54.49 C
ATOM 12 O2' U B1954 106.758 118.212 101.523 1.00 56.38 O
ATOM 13 C1' U B1954 107.235 116.456 103.093 1.00 55.04 C
ATOM 14 N1 U B1954 108.339 115.580 103.524 1.00 56.53 N
ATOM 15 C2 U B1954 109.628 116.092 103.502 1.00 57.50 C
ATOM 16 O2 U B1954 109.886 117.234 103.151 1.00 60.66 O
ATOM 17 N3 U B1954 110.604 115.219 103.910 1.00 56.53 N
ATOM 18 C4 U B1954 110.431 113.921 104.333 1.00 56.23 C
ATOM 19 O4 U B1954 111.415 113.249 104.643 1.00 57.41 O
ATOM 20 C5 U B1954 109.077 113.470 104.335 1.00 56.13 C
ATOM 21 C6 U B1954 108.103 114.290 103.940 1.00 55.57 C
ATOM 22 P G B1955 106.734 115.552 98.348 1.00 53.39 P
ATOM 23 OP1 G B1955 106.026 116.120 97.172 1.00 55.82 O
ATOM 24 OP2 G B1955 106.781 114.076 98.544 1.00 53.27 O
ATOM 25 O5' G B1955 108.223 116.102 98.356 1.00 55.01 O
TER
Atoms:
OP1: (100.133,123.564,112.293)
OP2: (98.427,122.466,110.718)
C3': (101.390,124.164,107.424)
C1': (102.752,122.310,106.976)
C5': (101.756,123.817,109.964)
O4': (103.091,122.718,108.277)
C8: (101.991,119.877,107.096)
O2': (101.034,122.845,105.387)
C6: (104.691,118.005,105.868)
C5: (103.711,118.883,106.349)
C4: (104.042,120.221,106.411)
P: (99.813,122.567,111.234)
C4': (102.364,123.940,108.588)
C2': (101.323,122.791,106.772)
C2: (106.065,119.850,105.645)
N1: (105.883,118.530,105.519)
N3: (105.216,120.778,106.073)
N6: (104.505,116.689,105.732)
N7: (102.415,118.677,106.796)
N9: (102.914,120.864,106.856)
O5': (100.765,122.786,109.976)
O3': (101.953,125.070,106.484)
OP2: (98.427,122.466,110.718)
C3': (101.390,124.164,107.424)
C1': (102.752,122.310,106.976)
C5': (101.756,123.817,109.964)
O4': (103.091,122.718,108.277)
C8: (101.991,119.877,107.096)
O2': (101.034,122.845,105.387)
C6: (104.691,118.005,105.868)
C5: (103.711,118.883,106.349)
C4: (104.042,120.221,106.411)
P: (99.813,122.567,111.234)
C4': (102.364,123.940,108.588)
C2': (101.323,122.791,106.772)
C2: (106.065,119.850,105.645)
N1: (105.883,118.530,105.519)
N3: (105.216,120.778,106.073)
N6: (104.505,116.689,105.732)
N7: (102.415,118.677,106.796)
N9: (102.914,120.864,106.856)
O5': (100.765,122.786,109.976)
O3': (101.953,125.070,106.484)
C4: (110.431,113.921,104.333)
N3: (110.604,115.219,103.910)
OP1: (105.484,111.580,102.795)
OP2: (104.344,112.508,104.900)
C2: (109.628,116.092,103.502)
C1': (107.235,116.456,103.093)
C3': (106.615,115.851,100.910)
O5': (104.223,113.769,102.808)
O4': (106.030,115.713,103.172)
C5': (104.967,114.147,101.670)
P: (104.359,112.315,103.431)
C4': (105.474,115.545,101.844)
C2': (107.365,116.944,101.647)
O2': (106.758,118.212,101.523)
N1: (108.339,115.580,103.524)
O4: (111.415,113.249,104.643)
O2: (109.886,117.234,103.151)
C6: (108.103,114.290,103.940)
C5: (109.077,113.470,104.335)
O3': (106.116,116.223,99.650)
N3: (110.604,115.219,103.910)
OP1: (105.484,111.580,102.795)
OP2: (104.344,112.508,104.900)
C2: (109.628,116.092,103.502)
C1': (107.235,116.456,103.093)
C3': (106.615,115.851,100.910)
O5': (104.223,113.769,102.808)
O4': (106.030,115.713,103.172)
C5': (104.967,114.147,101.670)
P: (104.359,112.315,103.431)
C4': (105.474,115.545,101.844)
C2': (107.365,116.944,101.647)
O2': (106.758,118.212,101.523)
N1: (108.339,115.580,103.524)
O4: (111.415,113.249,104.643)
O2: (109.886,117.234,103.151)
C6: (108.103,114.290,103.940)
C5: (109.077,113.470,104.335)
O3': (106.116,116.223,99.650)
Image (generated by PyMOL):