ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0219:0654

Extra

PDB:
ATOM 1 O3' C A 218 53.652 91.307 23.479 1.00 41.22 O
ATOM 2 P G A 219 53.184 92.401 22.406 1.00 42.64 P
ATOM 3 OP1 G A 219 52.441 91.680 21.348 1.00 44.56 O
ATOM 4 OP2 G A 219 54.346 93.243 22.041 1.00 45.02 O
ATOM 5 O5' G A 219 52.152 93.306 23.202 1.00 39.75 O
ATOM 6 C5' G A 219 50.939 92.752 23.712 1.00 38.15 C
ATOM 7 C4' G A 219 50.202 93.791 24.507 1.00 38.53 C
ATOM 8 O4' G A 219 50.941 94.110 25.711 1.00 38.73 O
ATOM 9 C3' G A 219 50.065 95.122 23.803 1.00 38.46 C
ATOM 10 O3' G A 219 48.989 95.093 22.886 1.00 42.60 O
ATOM 11 C2' G A 219 49.858 96.085 24.964 1.00 37.63 C
ATOM 12 O2' G A 219 48.549 96.062 25.484 1.00 35.37 O
ATOM 13 C1' G A 219 50.798 95.487 26.006 1.00 37.14 C
ATOM 14 N9 G A 219 52.123 96.094 26.022 1.00 37.10 N
ATOM 15 C8 G A 219 53.293 95.567 25.526 1.00 36.88 C
ATOM 16 N7 G A 219 54.330 96.330 25.741 1.00 37.96 N
ATOM 17 C5 G A 219 53.812 97.433 26.410 1.00 38.01 C
ATOM 18 C6 G A 219 54.458 98.593 26.921 1.00 36.76 C
ATOM 19 O6 G A 219 55.656 98.891 26.877 1.00 35.12 O
ATOM 20 N1 G A 219 53.550 99.454 27.532 1.00 35.25 N
ATOM 21 C2 G A 219 52.199 99.237 27.631 1.00 35.89 C
ATOM 22 N2 G A 219 51.483 100.190 28.232 1.00 37.33 N
ATOM 23 N3 G A 219 51.589 98.164 27.168 1.00 37.72 N
ATOM 24 C4 G A 219 52.449 97.308 26.575 1.00 38.30 C
ATOM 25 P A A 220 48.879 96.231 21.766 1.00 44.63 P
ATOM 26 OP1 A A 220 47.585 96.061 21.047 1.00 42.84 O
ATOM 27 OP2 A A 220 50.163 96.245 21.006 1.00 42.44 O
ATOM 28 O5' A A 220 48.767 97.556 22.632 1.00 42.97 O
TER

ATOM 1 O3' A B 653 45.148 101.283 34.200 1.00 36.21 O
ATOM 2 P A B 654 44.569 102.510 33.356 1.00 38.69 P
ATOM 3 OP1 A B 654 44.412 103.635 34.308 1.00 36.30 O
ATOM 4 OP2 A B 654 43.394 102.039 32.582 1.00 38.49 O
ATOM 5 O5' A B 654 45.746 102.845 32.330 1.00 38.54 O
ATOM 6 C5' A B 654 47.025 103.312 32.806 1.00 37.54 C
ATOM 7 C4' A B 654 48.095 103.118 31.754 1.00 37.94 C
ATOM 8 O4' A B 654 48.253 101.706 31.463 1.00 38.35 O
ATOM 9 C3' A B 654 47.837 103.751 30.396 1.00 36.27 C
ATOM 10 O3' A B 654 48.185 105.117 30.389 1.00 35.33 O
ATOM 11 C2' A B 654 48.743 102.935 29.488 1.00 36.44 C
ATOM 12 O2' A B 654 50.104 103.300 29.582 1.00 33.67 O
ATOM 13 C1' A B 654 48.565 101.538 30.085 1.00 38.61 C
ATOM 14 N9 A B 654 47.457 100.821 29.453 1.00 39.43 N
ATOM 15 C8 A B 654 46.122 100.882 29.772 1.00 37.81 C
ATOM 16 N7 A B 654 45.366 100.121 29.022 1.00 38.07 N
ATOM 17 C5 A B 654 46.260 99.518 28.150 1.00 37.90 C
ATOM 18 C6 A B 654 46.082 98.602 27.109 1.00 37.61 C
ATOM 19 N6 A B 654 44.896 98.100 26.770 1.00 39.17 N
ATOM 20 N1 A B 654 47.176 98.208 26.422 1.00 37.40 N
ATOM 21 C2 A B 654 48.367 98.702 26.776 1.00 38.78 C
ATOM 22 N3 A B 654 48.665 99.566 27.745 1.00 39.78 N
ATOM 23 C4 A B 654 47.551 99.940 28.402 1.00 39.32 C
ATOM 24 P C B 655 47.169 106.192 29.772 1.00 37.72 P
ATOM 25 OP1 C B 655 47.933 107.458 29.704 1.00 38.23 O
ATOM 26 OP2 C B 655 45.872 106.152 30.509 1.00 36.50 O
ATOM 27 O5' C B 655 46.905 105.679 28.289 1.00 38.34 O
TER

Atoms:
OP1: (52.441,91.680,21.348)
OP2: (54.346,93.243,22.041)
C3': (50.065,95.122,23.803)
C1': (50.798,95.487,26.006)
C5': (50.939,92.752,23.712)
O6: (55.656,98.891,26.877)
O4': (50.941,94.110,25.711)
C8: (53.293,95.567,25.526)
C2: (52.199,99.237,27.631)
C6: (54.458,98.593,26.921)
C5: (53.812,97.433,26.410)
C4: (52.449,97.308,26.575)
P: (53.184,92.401,22.406)
C4': (50.202,93.791,24.507)
C2': (49.858,96.085,24.964)
O2': (48.549,96.062,25.484)
N1: (53.550,99.454,27.532)
N2: (51.483,100.190,28.232)
N3: (51.589,98.164,27.168)
N7: (54.330,96.330,25.741)
N9: (52.123,96.094,26.022)
O5': (52.152,93.306,23.202)
O3': (48.989,95.093,22.886)
OP1: (44.412,103.635,34.308)
OP2: (43.394,102.039,32.582)
C3': (47.837,103.751,30.396)
C1': (48.565,101.538,30.085)
C5': (47.025,103.312,32.806)
O4': (48.253,101.706,31.463)
C8: (46.122,100.882,29.772)
O2': (50.104,103.300,29.582)
C6: (46.082,98.602,27.109)
C5: (46.260,99.518,28.150)
C4: (47.551,99.940,28.402)
P: (44.569,102.510,33.356)
C4': (48.095,103.118,31.754)
C2': (48.743,102.935,29.488)
C2: (48.367,98.702,26.776)
N1: (47.176,98.208,26.422)
N3: (48.665,99.566,27.745)
N6: (44.896,98.100,26.770)
N7: (45.366,100.121,29.022)
N9: (47.457,100.821,29.453)
O5': (45.746,102.845,32.330)
O3': (48.185,105.117,30.389)
Image (generated by PyMOL):
PyMOL image
show in jmol