ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01067:01061

Extra

PDB:
ATOM 1 O3' A A1066 11.442 104.180 120.746 1.00 45.13 O
ATOM 2 P G A1067 10.872 105.055 121.970 1.00 45.50 P
ATOM 3 OP1 G A1067 9.752 104.245 122.507 1.00 47.23 O
ATOM 4 OP2 G A1067 10.631 106.460 121.551 1.00 44.50 O
ATOM 5 O5' G A1067 12.036 105.046 123.053 1.00 43.32 O
ATOM 6 C5' G A1067 12.665 103.819 123.418 1.00 42.50 C
ATOM 7 C4' G A1067 12.604 103.624 124.910 1.00 43.91 C
ATOM 8 O4' G A1067 13.054 102.284 125.217 1.00 43.76 O
ATOM 9 C3' G A1067 13.483 104.552 125.734 1.00 44.97 C
ATOM 10 O3' G A1067 12.959 104.634 127.057 1.00 47.50 O
ATOM 11 C2' G A1067 14.775 103.754 125.815 1.00 44.23 C
ATOM 12 O2' G A1067 15.561 104.133 126.921 1.00 44.85 O
ATOM 13 C1' G A1067 14.217 102.346 126.001 1.00 42.89 C
ATOM 14 N9 G A1067 15.067 101.235 125.603 1.00 44.06 N
ATOM 15 C8 G A1067 16.401 101.259 125.290 1.00 45.92 C
ATOM 16 N7 G A1067 16.885 100.075 125.027 1.00 46.85 N
ATOM 17 C5 G A1067 15.800 99.222 125.164 1.00 45.82 C
ATOM 18 C6 G A1067 15.718 97.817 125.025 1.00 47.08 C
ATOM 19 O6 G A1067 16.626 97.015 124.756 1.00 49.89 O
ATOM 20 N1 G A1067 14.421 97.357 125.245 1.00 45.62 N
ATOM 21 C2 G A1067 13.349 98.151 125.567 1.00 45.47 C
ATOM 22 N2 G A1067 12.180 97.529 125.738 1.00 46.27 N
ATOM 23 N3 G A1067 13.418 99.459 125.710 1.00 44.92 N
ATOM 24 C4 G A1067 14.666 99.925 125.497 1.00 45.18 C
ATOM 25 P U A1068 11.771 105.656 127.401 1.00 50.57 P
ATOM 26 OP1 U A1068 10.600 104.795 127.714 1.00 50.43 O
ATOM 27 OP2 U A1068 11.647 106.724 126.367 1.00 48.18 O
ATOM 28 O5' U A1068 12.250 106.319 128.766 1.00 50.49 O
TER

ATOM 1 O3' U B1060 18.629 105.295 123.841 1.00 44.18 O
ATOM 2 P C B1061 19.013 104.980 125.364 1.00 44.38 P
ATOM 3 OP1 C B1061 20.420 104.514 125.404 1.00 46.09 O
ATOM 4 OP2 C B1061 17.939 104.090 125.870 1.00 44.73 O
ATOM 5 O5' C B1061 18.960 106.399 126.084 1.00 38.67 O
ATOM 6 C5' C B1061 17.745 106.894 126.658 1.00 38.79 C
ATOM 7 C4' C B1061 17.895 108.350 127.023 1.00 38.31 C
ATOM 8 O4' C B1061 19.004 108.482 127.945 1.00 39.38 O
ATOM 9 C3' C B1061 18.256 109.285 125.881 1.00 40.82 C
ATOM 10 O3' C B1061 17.106 109.677 125.145 1.00 42.71 O
ATOM 11 C2' C B1061 18.922 110.443 126.612 1.00 40.37 C
ATOM 12 O2' C B1061 18.006 111.300 127.255 1.00 42.19 O
ATOM 13 C1' C B1061 19.702 109.694 127.692 1.00 38.91 C
ATOM 14 N1 C B1061 21.084 109.360 127.291 1.00 37.34 N
ATOM 15 C2 C B1061 22.031 110.386 127.201 1.00 37.77 C
ATOM 16 O2 C B1061 21.680 111.555 127.433 1.00 37.14 O
ATOM 17 N3 C B1061 23.303 110.076 126.862 1.00 37.90 N
ATOM 18 C4 C B1061 23.640 108.807 126.618 1.00 36.70 C
ATOM 19 N4 C B1061 24.908 108.543 126.312 1.00 35.95 N
ATOM 20 C5 C B1061 22.694 107.754 126.684 1.00 35.88 C
ATOM 21 C6 C B1061 21.441 108.069 127.019 1.00 35.43 C
ATOM 22 P C B1062 17.261 110.157 123.622 1.00 42.98 P
ATOM 23 OP1 C B1062 15.908 110.372 123.069 1.00 46.52 O
ATOM 24 OP2 C B1062 18.192 109.248 122.917 1.00 44.13 O
ATOM 25 O5' C B1062 17.954 111.577 123.767 1.00 42.50 O
TER

Atoms:
OP1: (9.752,104.245,122.507)
OP2: (10.631,106.460,121.551)
C3': (13.483,104.552,125.734)
C1': (14.217,102.346,126.001)
C5': (12.665,103.819,123.418)
O6: (16.626,97.015,124.756)
O4': (13.054,102.284,125.217)
C8: (16.401,101.259,125.290)
C2: (13.349,98.151,125.567)
C6: (15.718,97.817,125.025)
C5: (15.800,99.222,125.164)
C4: (14.666,99.925,125.497)
P: (10.872,105.055,121.970)
C4': (12.604,103.624,124.910)
C2': (14.775,103.754,125.815)
O2': (15.561,104.133,126.921)
N1: (14.421,97.357,125.245)
N2: (12.180,97.529,125.738)
N3: (13.418,99.459,125.710)
N7: (16.885,100.075,125.027)
N9: (15.067,101.235,125.603)
O5': (12.036,105.046,123.053)
O3': (12.959,104.634,127.057)
C2: (22.031,110.386,127.201)
OP1: (20.420,104.514,125.404)
OP2: (17.939,104.090,125.870)
C4: (23.640,108.807,126.618)
O5': (18.960,106.399,126.084)
C3': (18.256,109.285,125.881)
C1': (19.702,109.694,127.692)
O4': (19.004,108.482,127.945)
C5': (17.745,106.894,126.658)
P: (19.013,104.980,125.364)
O2: (21.680,111.555,127.433)
C4': (17.895,108.350,127.023)
C2': (18.922,110.443,126.612)
O2': (18.006,111.300,127.255)
N1: (21.084,109.360,127.291)
N3: (23.303,110.076,126.862)
N4: (24.908,108.543,126.312)
C6: (21.441,108.069,127.019)
C5: (22.694,107.754,126.684)
O3': (17.106,109.677,125.145)
Image (generated by PyMOL):
PyMOL image
show in jmol