ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0173:032

Extra

PDB:
ATOM 1 O3' G A 172 65.336 126.437 22.870 1.00 39.43 O
ATOM 2 P G A 173 64.405 127.707 22.546 1.00 42.99 P
ATOM 3 OP1 G A 173 64.395 127.880 21.074 1.00 44.72 O
ATOM 4 OP2 G A 173 64.802 128.847 23.404 1.00 47.26 O
ATOM 5 O5' G A 173 62.949 127.257 23.004 1.00 45.63 O
ATOM 6 C5' G A 173 62.191 126.306 22.234 1.00 42.91 C
ATOM 7 C4' G A 173 61.528 125.289 23.138 1.00 42.25 C
ATOM 8 O4' G A 173 61.954 125.439 24.523 1.00 42.04 O
ATOM 9 C3' G A 173 60.008 125.331 23.162 1.00 42.15 C
ATOM 10 O3' G A 173 59.554 124.011 23.355 1.00 46.05 O
ATOM 11 C2' G A 173 59.716 126.108 24.440 1.00 41.26 C
ATOM 12 O2' G A 173 58.455 125.800 25.005 1.00 38.43 O
ATOM 13 C1' G A 173 60.819 125.583 25.350 1.00 41.87 C
ATOM 14 N9 G A 173 61.145 126.459 26.472 1.00 44.22 N
ATOM 15 C8 G A 173 61.701 127.714 26.417 1.00 45.52 C
ATOM 16 N7 G A 173 61.860 128.256 27.595 1.00 46.51 N
ATOM 17 C5 G A 173 61.389 127.299 28.483 1.00 45.46 C
ATOM 18 C6 G A 173 61.317 127.319 29.899 1.00 46.01 C
ATOM 19 O6 G A 173 61.681 128.212 30.679 1.00 44.75 O
ATOM 20 N1 G A 173 60.759 126.145 30.397 1.00 45.72 N
ATOM 21 C2 G A 173 60.332 125.085 29.634 1.00 44.87 C
ATOM 22 N2 G A 173 59.804 124.048 30.303 1.00 43.93 N
ATOM 23 N3 G A 173 60.410 125.047 28.315 1.00 43.73 N
ATOM 24 C4 G A 173 60.942 126.183 27.808 1.00 44.70 C
ATOM 25 P A A 174 59.318 123.051 22.097 1.00 45.54 P
ATOM 26 OP1 A A 174 60.597 122.959 21.348 1.00 45.81 O
ATOM 27 OP2 A A 174 58.079 123.479 21.398 1.00 47.82 O
ATOM 28 O5' A A 174 59.051 121.648 22.797 1.00 44.17 O
TER

ATOM 1 O3' G B 31 58.442 130.384 24.030 1.00 40.90 O
ATOM 2 P C B 32 59.228 129.791 22.755 1.00 40.71 P
ATOM 3 OP1 C B 32 59.191 130.886 21.758 1.00 41.45 O
ATOM 4 OP2 C B 32 58.714 128.444 22.385 1.00 42.00 O
ATOM 5 O5' C B 32 60.730 129.627 23.268 1.00 40.43 O
ATOM 6 C5' C B 32 61.648 130.747 23.257 1.00 39.33 C
ATOM 7 C4' C B 32 61.424 131.633 24.465 1.00 38.29 C
ATOM 8 O4' C B 32 61.727 130.905 25.687 1.00 37.25 O
ATOM 9 C3' C B 32 62.323 132.854 24.552 1.00 40.00 C
ATOM 10 O3' C B 32 61.835 133.919 23.734 1.00 44.89 O
ATOM 11 C2' C B 32 62.248 133.194 26.033 1.00 37.44 C
ATOM 12 O2' C B 32 61.050 133.857 26.365 1.00 37.94 O
ATOM 13 C1' C B 32 62.245 131.799 26.660 1.00 35.06 C
ATOM 14 N1 C B 32 63.600 131.363 27.048 1.00 33.01 N
ATOM 15 C2 C B 32 64.185 131.927 28.192 1.00 34.01 C
ATOM 16 O2 C B 32 63.518 132.723 28.879 1.00 32.54 O
ATOM 17 N3 C B 32 65.457 131.590 28.521 1.00 33.36 N
ATOM 18 C4 C B 32 66.132 130.718 27.766 1.00 34.12 C
ATOM 19 N4 C B 32 67.386 130.427 28.114 1.00 33.38 N
ATOM 20 C5 C B 32 65.551 130.107 26.617 1.00 32.86 C
ATOM 21 C6 C B 32 64.295 130.452 26.300 1.00 33.42 C
ATOM 22 P U B 33 62.872 134.940 23.046 1.00 44.35 P
ATOM 23 OP1 U B 33 62.107 135.727 22.042 1.00 41.96 O
ATOM 24 OP2 U B 33 64.082 134.178 22.624 1.00 44.09 O
ATOM 25 O5' U B 33 63.290 135.917 24.231 1.00 43.57 O
TER

Atoms:
OP1: (64.395,127.880,21.074)
OP2: (64.802,128.847,23.404)
C3': (60.008,125.331,23.162)
C1': (60.819,125.583,25.350)
C5': (62.191,126.306,22.234)
O6: (61.681,128.212,30.679)
O4': (61.954,125.439,24.523)
C8: (61.701,127.714,26.417)
C2: (60.332,125.085,29.634)
C6: (61.317,127.319,29.899)
C5: (61.389,127.299,28.483)
C4: (60.942,126.183,27.808)
P: (64.405,127.707,22.546)
C4': (61.528,125.289,23.138)
C2': (59.716,126.108,24.440)
O2': (58.455,125.800,25.005)
N1: (60.759,126.145,30.397)
N2: (59.804,124.048,30.303)
N3: (60.410,125.047,28.315)
N7: (61.860,128.256,27.595)
N9: (61.145,126.459,26.472)
O5': (62.949,127.257,23.004)
O3': (59.554,124.011,23.355)
C2: (64.185,131.927,28.192)
OP1: (59.191,130.886,21.758)
OP2: (58.714,128.444,22.385)
C4: (66.132,130.718,27.766)
O5': (60.730,129.627,23.268)
C3': (62.323,132.854,24.552)
C1': (62.245,131.799,26.660)
O4': (61.727,130.905,25.687)
C5': (61.648,130.747,23.257)
P: (59.228,129.791,22.755)
O2: (63.518,132.723,28.879)
C4': (61.424,131.633,24.465)
C2': (62.248,133.194,26.033)
O2': (61.050,133.857,26.365)
N1: (63.600,131.363,27.048)
N3: (65.457,131.590,28.521)
N4: (67.386,130.427,28.114)
C6: (64.295,130.452,26.300)
C5: (65.551,130.107,26.617)
O3': (61.835,133.919,23.734)
Image (generated by PyMOL):
PyMOL image
show in jmol