Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0401:0181
Extra
PDB:
ATOM 1 O3' C A 400 92.447 88.853 15.241 1.00 73.31 O
ATOM 2 P G A 401 91.686 88.222 16.507 1.00 73.07 P
ATOM 3 OP1 G A 401 92.706 88.020 17.575 1.00 72.84 O
ATOM 4 OP2 G A 401 90.864 87.072 16.041 1.00 71.90 O
ATOM 5 O5' G A 401 90.683 89.377 16.953 1.00 69.85 O
ATOM 6 C5' G A 401 91.181 90.677 17.310 1.00 65.70 C
ATOM 7 C4' G A 401 90.044 91.635 17.543 1.00 61.65 C
ATOM 8 O4' G A 401 89.252 91.780 16.334 1.00 61.50 O
ATOM 9 C3' G A 401 89.015 91.205 18.562 1.00 60.45 C
ATOM 10 O3' G A 401 89.497 91.407 19.878 1.00 60.80 O
ATOM 11 C2' G A 401 87.852 92.119 18.211 1.00 60.61 C
ATOM 12 O2' G A 401 88.063 93.444 18.645 1.00 61.21 O
ATOM 13 C1' G A 401 87.915 92.102 16.684 1.00 59.73 C
ATOM 14 N9 G A 401 87.020 91.104 16.104 1.00 59.22 N
ATOM 15 C8 G A 401 87.356 89.874 15.587 1.00 58.87 C
ATOM 16 N7 G A 401 86.323 89.201 15.152 1.00 58.17 N
ATOM 17 C5 G A 401 85.238 90.037 15.393 1.00 58.21 C
ATOM 18 C6 G A 401 83.844 89.851 15.135 1.00 56.50 C
ATOM 19 O6 G A 401 83.277 88.887 14.614 1.00 55.49 O
ATOM 20 N1 G A 401 83.097 90.944 15.552 1.00 55.75 N
ATOM 21 C2 G A 401 83.613 92.074 16.137 1.00 56.68 C
ATOM 22 N2 G A 401 82.727 93.012 16.485 1.00 56.37 N
ATOM 23 N3 G A 401 84.904 92.269 16.369 1.00 56.94 N
ATOM 24 C4 G A 401 85.652 91.217 15.979 1.00 58.60 C
ATOM 25 P C A 402 88.978 90.463 21.073 1.00 60.44 P
ATOM 26 OP1 C A 402 89.884 90.722 22.224 1.00 58.51 O
ATOM 27 OP2 C A 402 88.811 89.079 20.579 1.00 61.29 O
ATOM 28 O5' C A 402 87.533 91.043 21.407 1.00 58.40 O
TER
ATOM 1 O3' A B 180 76.087 99.130 18.926 1.00 56.60 O
ATOM 2 P A B 181 77.267 100.187 19.186 1.00 57.12 P
ATOM 3 OP1 A B 181 76.939 100.871 20.457 1.00 57.75 O
ATOM 4 OP2 A B 181 77.480 100.987 17.952 1.00 57.34 O
ATOM 5 O5' A B 181 78.556 99.288 19.412 1.00 55.37 O
ATOM 6 C5' A B 181 78.474 98.079 20.164 1.00 56.11 C
ATOM 7 C4' A B 181 79.058 96.946 19.372 1.00 56.60 C
ATOM 8 O4' A B 181 80.440 97.243 19.076 1.00 57.90 O
ATOM 9 C3' A B 181 79.127 95.621 20.104 1.00 58.23 C
ATOM 10 O3' A B 181 77.862 94.972 19.999 1.00 57.26 O
ATOM 11 C2' A B 181 80.223 94.882 19.336 1.00 59.91 C
ATOM 12 O2' A B 181 79.747 94.257 18.160 1.00 62.54 O
ATOM 13 C1' A B 181 81.154 96.033 18.934 1.00 58.62 C
ATOM 14 N9 A B 181 82.398 96.141 19.686 1.00 57.52 N
ATOM 15 C8 A B 181 82.584 96.597 20.963 1.00 58.58 C
ATOM 16 N7 A B 181 83.836 96.577 21.354 1.00 58.76 N
ATOM 17 C5 A B 181 84.518 96.075 20.257 1.00 58.42 C
ATOM 18 C6 A B 181 85.878 95.810 20.028 1.00 58.21 C
ATOM 19 N6 A B 181 86.836 96.011 20.933 1.00 60.39 N
ATOM 20 N1 A B 181 86.228 95.323 18.823 1.00 57.40 N
ATOM 21 C2 A B 181 85.270 95.109 17.921 1.00 58.77 C
ATOM 22 N3 A B 181 83.957 95.308 18.018 1.00 58.75 N
ATOM 23 C4 A B 181 83.643 95.801 19.224 1.00 58.22 C
ATOM 24 P A B 182 77.406 93.891 21.103 1.00 58.04 P
ATOM 25 OP1 A B 182 78.303 93.968 22.289 1.00 55.77 O
ATOM 26 OP2 A B 182 77.234 92.591 20.406 1.00 57.70 O
ATOM 27 O5' A B 182 75.958 94.398 21.529 1.00 55.02 O
TER
ATOM 2 P G A 401 91.686 88.222 16.507 1.00 73.07 P
ATOM 3 OP1 G A 401 92.706 88.020 17.575 1.00 72.84 O
ATOM 4 OP2 G A 401 90.864 87.072 16.041 1.00 71.90 O
ATOM 5 O5' G A 401 90.683 89.377 16.953 1.00 69.85 O
ATOM 6 C5' G A 401 91.181 90.677 17.310 1.00 65.70 C
ATOM 7 C4' G A 401 90.044 91.635 17.543 1.00 61.65 C
ATOM 8 O4' G A 401 89.252 91.780 16.334 1.00 61.50 O
ATOM 9 C3' G A 401 89.015 91.205 18.562 1.00 60.45 C
ATOM 10 O3' G A 401 89.497 91.407 19.878 1.00 60.80 O
ATOM 11 C2' G A 401 87.852 92.119 18.211 1.00 60.61 C
ATOM 12 O2' G A 401 88.063 93.444 18.645 1.00 61.21 O
ATOM 13 C1' G A 401 87.915 92.102 16.684 1.00 59.73 C
ATOM 14 N9 G A 401 87.020 91.104 16.104 1.00 59.22 N
ATOM 15 C8 G A 401 87.356 89.874 15.587 1.00 58.87 C
ATOM 16 N7 G A 401 86.323 89.201 15.152 1.00 58.17 N
ATOM 17 C5 G A 401 85.238 90.037 15.393 1.00 58.21 C
ATOM 18 C6 G A 401 83.844 89.851 15.135 1.00 56.50 C
ATOM 19 O6 G A 401 83.277 88.887 14.614 1.00 55.49 O
ATOM 20 N1 G A 401 83.097 90.944 15.552 1.00 55.75 N
ATOM 21 C2 G A 401 83.613 92.074 16.137 1.00 56.68 C
ATOM 22 N2 G A 401 82.727 93.012 16.485 1.00 56.37 N
ATOM 23 N3 G A 401 84.904 92.269 16.369 1.00 56.94 N
ATOM 24 C4 G A 401 85.652 91.217 15.979 1.00 58.60 C
ATOM 25 P C A 402 88.978 90.463 21.073 1.00 60.44 P
ATOM 26 OP1 C A 402 89.884 90.722 22.224 1.00 58.51 O
ATOM 27 OP2 C A 402 88.811 89.079 20.579 1.00 61.29 O
ATOM 28 O5' C A 402 87.533 91.043 21.407 1.00 58.40 O
TER
ATOM 1 O3' A B 180 76.087 99.130 18.926 1.00 56.60 O
ATOM 2 P A B 181 77.267 100.187 19.186 1.00 57.12 P
ATOM 3 OP1 A B 181 76.939 100.871 20.457 1.00 57.75 O
ATOM 4 OP2 A B 181 77.480 100.987 17.952 1.00 57.34 O
ATOM 5 O5' A B 181 78.556 99.288 19.412 1.00 55.37 O
ATOM 6 C5' A B 181 78.474 98.079 20.164 1.00 56.11 C
ATOM 7 C4' A B 181 79.058 96.946 19.372 1.00 56.60 C
ATOM 8 O4' A B 181 80.440 97.243 19.076 1.00 57.90 O
ATOM 9 C3' A B 181 79.127 95.621 20.104 1.00 58.23 C
ATOM 10 O3' A B 181 77.862 94.972 19.999 1.00 57.26 O
ATOM 11 C2' A B 181 80.223 94.882 19.336 1.00 59.91 C
ATOM 12 O2' A B 181 79.747 94.257 18.160 1.00 62.54 O
ATOM 13 C1' A B 181 81.154 96.033 18.934 1.00 58.62 C
ATOM 14 N9 A B 181 82.398 96.141 19.686 1.00 57.52 N
ATOM 15 C8 A B 181 82.584 96.597 20.963 1.00 58.58 C
ATOM 16 N7 A B 181 83.836 96.577 21.354 1.00 58.76 N
ATOM 17 C5 A B 181 84.518 96.075 20.257 1.00 58.42 C
ATOM 18 C6 A B 181 85.878 95.810 20.028 1.00 58.21 C
ATOM 19 N6 A B 181 86.836 96.011 20.933 1.00 60.39 N
ATOM 20 N1 A B 181 86.228 95.323 18.823 1.00 57.40 N
ATOM 21 C2 A B 181 85.270 95.109 17.921 1.00 58.77 C
ATOM 22 N3 A B 181 83.957 95.308 18.018 1.00 58.75 N
ATOM 23 C4 A B 181 83.643 95.801 19.224 1.00 58.22 C
ATOM 24 P A B 182 77.406 93.891 21.103 1.00 58.04 P
ATOM 25 OP1 A B 182 78.303 93.968 22.289 1.00 55.77 O
ATOM 26 OP2 A B 182 77.234 92.591 20.406 1.00 57.70 O
ATOM 27 O5' A B 182 75.958 94.398 21.529 1.00 55.02 O
TER
Atoms:
OP1: (92.706,88.020,17.575)
OP2: (90.864,87.072,16.041)
C3': (89.015,91.205,18.562)
C1': (87.915,92.102,16.684)
C5': (91.181,90.677,17.310)
O6: (83.277,88.887,14.614)
O4': (89.252,91.780,16.334)
C8: (87.356,89.874,15.587)
C2: (83.613,92.074,16.137)
C6: (83.844,89.851,15.135)
C5: (85.238,90.037,15.393)
C4: (85.652,91.217,15.979)
P: (91.686,88.222,16.507)
C4': (90.044,91.635,17.543)
C2': (87.852,92.119,18.211)
O2': (88.063,93.444,18.645)
N1: (83.097,90.944,15.552)
N2: (82.727,93.012,16.485)
N3: (84.904,92.269,16.369)
N7: (86.323,89.201,15.152)
N9: (87.020,91.104,16.104)
O5': (90.683,89.377,16.953)
O3': (89.497,91.407,19.878)
OP2: (90.864,87.072,16.041)
C3': (89.015,91.205,18.562)
C1': (87.915,92.102,16.684)
C5': (91.181,90.677,17.310)
O6: (83.277,88.887,14.614)
O4': (89.252,91.780,16.334)
C8: (87.356,89.874,15.587)
C2: (83.613,92.074,16.137)
C6: (83.844,89.851,15.135)
C5: (85.238,90.037,15.393)
C4: (85.652,91.217,15.979)
P: (91.686,88.222,16.507)
C4': (90.044,91.635,17.543)
C2': (87.852,92.119,18.211)
O2': (88.063,93.444,18.645)
N1: (83.097,90.944,15.552)
N2: (82.727,93.012,16.485)
N3: (84.904,92.269,16.369)
N7: (86.323,89.201,15.152)
N9: (87.020,91.104,16.104)
O5': (90.683,89.377,16.953)
O3': (89.497,91.407,19.878)
OP1: (76.939,100.871,20.457)
OP2: (77.480,100.987,17.952)
C3': (79.127,95.621,20.104)
C1': (81.154,96.033,18.934)
C5': (78.474,98.079,20.164)
O4': (80.440,97.243,19.076)
C8: (82.584,96.597,20.963)
O2': (79.747,94.257,18.160)
C6: (85.878,95.810,20.028)
C5: (84.518,96.075,20.257)
C4: (83.643,95.801,19.224)
P: (77.267,100.187,19.186)
C4': (79.058,96.946,19.372)
C2': (80.223,94.882,19.336)
C2: (85.270,95.109,17.921)
N1: (86.228,95.323,18.823)
N3: (83.957,95.308,18.018)
N6: (86.836,96.011,20.933)
N7: (83.836,96.577,21.354)
N9: (82.398,96.141,19.686)
O5': (78.556,99.288,19.412)
O3': (77.862,94.972,19.999)
OP2: (77.480,100.987,17.952)
C3': (79.127,95.621,20.104)
C1': (81.154,96.033,18.934)
C5': (78.474,98.079,20.164)
O4': (80.440,97.243,19.076)
C8: (82.584,96.597,20.963)
O2': (79.747,94.257,18.160)
C6: (85.878,95.810,20.028)
C5: (84.518,96.075,20.257)
C4: (83.643,95.801,19.224)
P: (77.267,100.187,19.186)
C4': (79.058,96.946,19.372)
C2': (80.223,94.882,19.336)
C2: (85.270,95.109,17.921)
N1: (86.228,95.323,18.823)
N3: (83.957,95.308,18.018)
N6: (86.836,96.011,20.933)
N7: (83.836,96.577,21.354)
N9: (82.398,96.141,19.686)
O5': (78.556,99.288,19.412)
O3': (77.862,94.972,19.999)
Image (generated by PyMOL):