ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:01108:01109

Extra

PDB:
ATOM 1 O3' C A1107 35.861 74.482 172.815 1.00 71.56 O
ATOM 2 P U A1108 34.769 73.430 173.360 1.00 70.22 P
ATOM 3 OP1 U A1108 35.511 72.360 174.068 1.00 69.28 O
ATOM 4 OP2 U A1108 33.831 73.067 172.265 1.00 70.67 O
ATOM 5 O5' U A1108 33.959 74.250 174.458 1.00 71.02 O
ATOM 6 C5' U A1108 33.306 75.490 174.137 1.00 71.67 C
ATOM 7 C4' U A1108 32.269 75.803 175.185 1.00 73.80 C
ATOM 8 O4' U A1108 31.770 77.159 175.009 1.00 74.20 O
ATOM 9 C3' U A1108 31.043 74.891 175.177 1.00 75.16 C
ATOM 10 O3' U A1108 30.573 74.703 176.511 1.00 76.92 O
ATOM 11 C2' U A1108 30.027 75.722 174.402 1.00 75.03 C
ATOM 12 O2' U A1108 28.687 75.377 174.697 1.00 76.03 O
ATOM 13 C1' U A1108 30.362 77.124 174.908 1.00 75.00 C
ATOM 14 N1 U A1108 29.906 78.233 174.056 1.00 75.41 N
ATOM 15 C2 U A1108 28.901 79.050 174.558 1.00 75.24 C
ATOM 16 O2 U A1108 28.405 78.897 175.665 1.00 74.62 O
ATOM 17 N3 U A1108 28.497 80.054 173.716 1.00 75.00 N
ATOM 18 C4 U A1108 28.975 80.321 172.453 1.00 75.79 C
ATOM 19 O4 U A1108 28.490 81.254 171.810 1.00 76.70 O
ATOM 20 C5 U A1108 30.021 79.447 172.011 1.00 75.77 C
ATOM 21 C6 U A1108 30.441 78.459 172.807 1.00 75.04 C
ATOM 22 P A A1109 30.564 73.231 177.157 1.00 78.06 P
ATOM 23 OP1 A A1109 30.144 72.248 176.122 1.00 77.58 O
ATOM 24 OP2 A A1109 29.802 73.329 178.429 1.00 79.23 O
ATOM 25 O5' A A1109 32.089 72.966 177.532 1.00 76.88 O
TER

ATOM 1 O3' U B1108 30.573 74.703 176.511 1.00 76.92 O
ATOM 2 P A B1109 30.564 73.231 177.157 1.00 78.06 P
ATOM 3 OP1 A B1109 30.144 72.248 176.122 1.00 77.58 O
ATOM 4 OP2 A B1109 29.802 73.329 178.429 1.00 79.23 O
ATOM 5 O5' A B1109 32.089 72.966 177.532 1.00 76.88 O
ATOM 6 C5' A B1109 32.716 73.701 178.598 1.00 75.20 C
ATOM 7 C4' A B1109 34.114 73.186 178.848 1.00 74.24 C
ATOM 8 O4' A B1109 34.051 71.809 179.312 1.00 74.88 O
ATOM 9 C3' A B1109 35.058 73.184 177.650 1.00 73.13 C
ATOM 10 O3' A B1109 36.385 73.415 178.109 1.00 70.79 O
ATOM 11 C2' A B1109 34.954 71.747 177.153 1.00 73.61 C
ATOM 12 O2' A B1109 36.100 71.327 176.441 1.00 73.65 O
ATOM 13 C1' A B1109 34.844 70.992 178.476 1.00 74.99 C
ATOM 14 N9 A B1109 34.228 69.666 178.394 1.00 75.89 N
ATOM 15 C8 A B1109 33.080 69.282 177.738 1.00 76.05 C
ATOM 16 N7 A B1109 32.801 68.007 177.866 1.00 75.87 N
ATOM 17 C5 A B1109 33.832 67.517 178.657 1.00 76.05 C
ATOM 18 C6 A B1109 34.113 66.234 179.156 1.00 76.06 C
ATOM 19 N6 A B1109 33.352 65.164 178.920 1.00 76.61 N
ATOM 20 N1 A B1109 35.220 66.085 179.915 1.00 75.86 N
ATOM 21 C2 A B1109 35.985 67.158 180.151 1.00 75.91 C
ATOM 22 N3 A B1109 35.826 68.413 179.741 1.00 75.83 N
ATOM 23 C4 A B1109 34.717 68.527 178.989 1.00 75.87 C
ATOM 24 P G B1110 36.945 74.914 178.222 1.00 69.46 P
ATOM 25 OP1 G B1110 38.381 74.872 177.878 1.00 70.17 O
ATOM 26 OP2 G B1110 36.523 75.477 179.520 1.00 70.39 O
ATOM 27 O5' G B1110 36.158 75.725 177.101 1.00 71.35 O
TER

Atoms:
C4: (28.975,80.321,172.453)
N3: (28.497,80.054,173.716)
OP1: (35.511,72.360,174.068)
OP2: (33.831,73.067,172.265)
C2: (28.901,79.050,174.558)
C1': (30.362,77.124,174.908)
C3': (31.043,74.891,175.177)
O5': (33.959,74.250,174.458)
O4': (31.770,77.159,175.009)
C5': (33.306,75.490,174.137)
P: (34.769,73.430,173.360)
C4': (32.269,75.803,175.185)
C2': (30.027,75.722,174.402)
O2': (28.687,75.377,174.697)
N1: (29.906,78.233,174.056)
O4: (28.490,81.254,171.810)
O2: (28.405,78.897,175.665)
C6: (30.441,78.459,172.807)
C5: (30.021,79.447,172.011)
O3': (30.573,74.703,176.511)
OP1: (30.144,72.248,176.122)
OP2: (29.802,73.329,178.429)
C3': (35.058,73.184,177.650)
C1': (34.844,70.992,178.476)
C5': (32.716,73.701,178.598)
O4': (34.051,71.809,179.312)
C8: (33.080,69.282,177.738)
O2': (36.100,71.327,176.441)
C6: (34.113,66.234,179.156)
C5: (33.832,67.517,178.657)
C4: (34.717,68.527,178.989)
P: (30.564,73.231,177.157)
C4': (34.114,73.186,178.848)
C2': (34.954,71.747,177.153)
C2: (35.985,67.158,180.151)
N1: (35.220,66.085,179.915)
N3: (35.826,68.413,179.741)
N6: (33.352,65.164,178.920)
N7: (32.801,68.007,177.866)
N9: (34.228,69.666,178.394)
O5': (32.089,72.966,177.532)
O3': (36.385,73.415,178.109)
Image (generated by PyMOL):
PyMOL image
show in jmol