Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01067:01061
Extra
PDB:
ATOM 1 O3' A A1066 11.513 104.591 121.106 1.00 44.95 O
ATOM 2 P G A1067 11.018 105.463 122.368 1.00 45.20 P
ATOM 3 OP1 G A1067 9.904 104.670 122.946 1.00 45.06 O
ATOM 4 OP2 G A1067 10.800 106.891 122.001 1.00 42.20 O
ATOM 5 O5' G A1067 12.214 105.405 123.411 1.00 43.34 O
ATOM 6 C5' G A1067 12.773 104.151 123.787 1.00 44.19 C
ATOM 7 C4' G A1067 12.753 103.993 125.285 1.00 45.57 C
ATOM 8 O4' G A1067 13.177 102.646 125.591 1.00 45.16 O
ATOM 9 C3' G A1067 13.686 104.914 126.064 1.00 46.33 C
ATOM 10 O3' G A1067 13.212 105.085 127.401 1.00 49.60 O
ATOM 11 C2' G A1067 14.945 104.071 126.150 1.00 45.71 C
ATOM 12 O2' G A1067 15.732 104.431 127.257 1.00 48.64 O
ATOM 13 C1' G A1067 14.347 102.685 126.359 1.00 43.91 C
ATOM 14 N9 G A1067 15.170 101.556 125.959 1.00 45.07 N
ATOM 15 C8 G A1067 16.505 101.559 125.645 1.00 47.97 C
ATOM 16 N7 G A1067 16.975 100.363 125.404 1.00 49.96 N
ATOM 17 C5 G A1067 15.878 99.524 125.551 1.00 48.14 C
ATOM 18 C6 G A1067 15.776 98.110 125.448 1.00 48.12 C
ATOM 19 O6 G A1067 16.668 97.286 125.220 1.00 49.80 O
ATOM 20 N1 G A1067 14.475 97.677 125.662 1.00 47.51 N
ATOM 21 C2 G A1067 13.414 98.491 125.955 1.00 47.48 C
ATOM 22 N2 G A1067 12.240 97.885 126.113 1.00 49.17 N
ATOM 23 N3 G A1067 13.498 99.801 126.079 1.00 46.40 N
ATOM 24 C4 G A1067 14.751 100.248 125.865 1.00 46.94 C
ATOM 25 P U A1068 11.910 105.987 127.701 1.00 51.84 P
ATOM 26 OP1 U A1068 10.823 105.022 128.038 1.00 50.90 O
ATOM 27 OP2 U A1068 11.697 106.993 126.622 1.00 48.55 O
ATOM 28 O5' U A1068 12.298 106.748 129.043 1.00 51.78 O
TER
ATOM 1 O3' U B1060 18.565 105.592 124.251 1.00 49.42 O
ATOM 2 P C B1061 19.129 105.347 125.731 1.00 49.41 P
ATOM 3 OP1 C B1061 20.573 105.033 125.642 1.00 49.94 O
ATOM 4 OP2 C B1061 18.213 104.380 126.378 1.00 48.61 O
ATOM 5 O5' C B1061 19.027 106.772 126.431 1.00 45.03 O
ATOM 6 C5' C B1061 17.779 107.280 126.896 1.00 43.61 C
ATOM 7 C4' C B1061 17.927 108.729 127.254 1.00 42.03 C
ATOM 8 O4' C B1061 19.034 108.838 128.173 1.00 43.55 O
ATOM 9 C3' C B1061 18.318 109.641 126.106 1.00 43.29 C
ATOM 10 O3' C B1061 17.178 110.042 125.368 1.00 46.18 O
ATOM 11 C2' C B1061 19.009 110.792 126.821 1.00 43.23 C
ATOM 12 O2' C B1061 18.122 111.706 127.428 1.00 43.39 O
ATOM 13 C1' C B1061 19.750 110.040 127.926 1.00 43.16 C
ATOM 14 N1 C B1061 21.151 109.700 127.599 1.00 41.16 N
ATOM 15 C2 C B1061 22.097 110.717 127.595 1.00 41.06 C
ATOM 16 O2 C B1061 21.733 111.866 127.855 1.00 42.69 O
ATOM 17 N3 C B1061 23.385 110.426 127.317 1.00 40.98 N
ATOM 18 C4 C B1061 23.743 109.169 127.076 1.00 39.45 C
ATOM 19 N4 C B1061 25.025 108.924 126.858 1.00 38.28 N
ATOM 20 C5 C B1061 22.799 108.108 127.061 1.00 39.51 C
ATOM 21 C6 C B1061 21.524 108.415 127.317 1.00 40.09 C
ATOM 22 P C B1062 17.335 110.479 123.837 1.00 47.65 P
ATOM 23 OP1 C B1062 15.985 110.754 123.300 1.00 50.06 O
ATOM 24 OP2 C B1062 18.202 109.494 123.152 1.00 47.56 O
ATOM 25 O5' C B1062 18.076 111.877 123.951 1.00 47.45 O
TER
ATOM 2 P G A1067 11.018 105.463 122.368 1.00 45.20 P
ATOM 3 OP1 G A1067 9.904 104.670 122.946 1.00 45.06 O
ATOM 4 OP2 G A1067 10.800 106.891 122.001 1.00 42.20 O
ATOM 5 O5' G A1067 12.214 105.405 123.411 1.00 43.34 O
ATOM 6 C5' G A1067 12.773 104.151 123.787 1.00 44.19 C
ATOM 7 C4' G A1067 12.753 103.993 125.285 1.00 45.57 C
ATOM 8 O4' G A1067 13.177 102.646 125.591 1.00 45.16 O
ATOM 9 C3' G A1067 13.686 104.914 126.064 1.00 46.33 C
ATOM 10 O3' G A1067 13.212 105.085 127.401 1.00 49.60 O
ATOM 11 C2' G A1067 14.945 104.071 126.150 1.00 45.71 C
ATOM 12 O2' G A1067 15.732 104.431 127.257 1.00 48.64 O
ATOM 13 C1' G A1067 14.347 102.685 126.359 1.00 43.91 C
ATOM 14 N9 G A1067 15.170 101.556 125.959 1.00 45.07 N
ATOM 15 C8 G A1067 16.505 101.559 125.645 1.00 47.97 C
ATOM 16 N7 G A1067 16.975 100.363 125.404 1.00 49.96 N
ATOM 17 C5 G A1067 15.878 99.524 125.551 1.00 48.14 C
ATOM 18 C6 G A1067 15.776 98.110 125.448 1.00 48.12 C
ATOM 19 O6 G A1067 16.668 97.286 125.220 1.00 49.80 O
ATOM 20 N1 G A1067 14.475 97.677 125.662 1.00 47.51 N
ATOM 21 C2 G A1067 13.414 98.491 125.955 1.00 47.48 C
ATOM 22 N2 G A1067 12.240 97.885 126.113 1.00 49.17 N
ATOM 23 N3 G A1067 13.498 99.801 126.079 1.00 46.40 N
ATOM 24 C4 G A1067 14.751 100.248 125.865 1.00 46.94 C
ATOM 25 P U A1068 11.910 105.987 127.701 1.00 51.84 P
ATOM 26 OP1 U A1068 10.823 105.022 128.038 1.00 50.90 O
ATOM 27 OP2 U A1068 11.697 106.993 126.622 1.00 48.55 O
ATOM 28 O5' U A1068 12.298 106.748 129.043 1.00 51.78 O
TER
ATOM 1 O3' U B1060 18.565 105.592 124.251 1.00 49.42 O
ATOM 2 P C B1061 19.129 105.347 125.731 1.00 49.41 P
ATOM 3 OP1 C B1061 20.573 105.033 125.642 1.00 49.94 O
ATOM 4 OP2 C B1061 18.213 104.380 126.378 1.00 48.61 O
ATOM 5 O5' C B1061 19.027 106.772 126.431 1.00 45.03 O
ATOM 6 C5' C B1061 17.779 107.280 126.896 1.00 43.61 C
ATOM 7 C4' C B1061 17.927 108.729 127.254 1.00 42.03 C
ATOM 8 O4' C B1061 19.034 108.838 128.173 1.00 43.55 O
ATOM 9 C3' C B1061 18.318 109.641 126.106 1.00 43.29 C
ATOM 10 O3' C B1061 17.178 110.042 125.368 1.00 46.18 O
ATOM 11 C2' C B1061 19.009 110.792 126.821 1.00 43.23 C
ATOM 12 O2' C B1061 18.122 111.706 127.428 1.00 43.39 O
ATOM 13 C1' C B1061 19.750 110.040 127.926 1.00 43.16 C
ATOM 14 N1 C B1061 21.151 109.700 127.599 1.00 41.16 N
ATOM 15 C2 C B1061 22.097 110.717 127.595 1.00 41.06 C
ATOM 16 O2 C B1061 21.733 111.866 127.855 1.00 42.69 O
ATOM 17 N3 C B1061 23.385 110.426 127.317 1.00 40.98 N
ATOM 18 C4 C B1061 23.743 109.169 127.076 1.00 39.45 C
ATOM 19 N4 C B1061 25.025 108.924 126.858 1.00 38.28 N
ATOM 20 C5 C B1061 22.799 108.108 127.061 1.00 39.51 C
ATOM 21 C6 C B1061 21.524 108.415 127.317 1.00 40.09 C
ATOM 22 P C B1062 17.335 110.479 123.837 1.00 47.65 P
ATOM 23 OP1 C B1062 15.985 110.754 123.300 1.00 50.06 O
ATOM 24 OP2 C B1062 18.202 109.494 123.152 1.00 47.56 O
ATOM 25 O5' C B1062 18.076 111.877 123.951 1.00 47.45 O
TER
Atoms:
OP1: (9.904,104.670,122.946)
OP2: (10.800,106.891,122.001)
C3': (13.686,104.914,126.064)
C1': (14.347,102.685,126.359)
C5': (12.773,104.151,123.787)
O6: (16.668,97.286,125.220)
O4': (13.177,102.646,125.591)
C8: (16.505,101.559,125.645)
C2: (13.414,98.491,125.955)
C6: (15.776,98.110,125.448)
C5: (15.878,99.524,125.551)
C4: (14.751,100.248,125.865)
P: (11.018,105.463,122.368)
C4': (12.753,103.993,125.285)
C2': (14.945,104.071,126.150)
O2': (15.732,104.431,127.257)
N1: (14.475,97.677,125.662)
N2: (12.240,97.885,126.113)
N3: (13.498,99.801,126.079)
N7: (16.975,100.363,125.404)
N9: (15.170,101.556,125.959)
O5': (12.214,105.405,123.411)
O3': (13.212,105.085,127.401)
OP2: (10.800,106.891,122.001)
C3': (13.686,104.914,126.064)
C1': (14.347,102.685,126.359)
C5': (12.773,104.151,123.787)
O6: (16.668,97.286,125.220)
O4': (13.177,102.646,125.591)
C8: (16.505,101.559,125.645)
C2: (13.414,98.491,125.955)
C6: (15.776,98.110,125.448)
C5: (15.878,99.524,125.551)
C4: (14.751,100.248,125.865)
P: (11.018,105.463,122.368)
C4': (12.753,103.993,125.285)
C2': (14.945,104.071,126.150)
O2': (15.732,104.431,127.257)
N1: (14.475,97.677,125.662)
N2: (12.240,97.885,126.113)
N3: (13.498,99.801,126.079)
N7: (16.975,100.363,125.404)
N9: (15.170,101.556,125.959)
O5': (12.214,105.405,123.411)
O3': (13.212,105.085,127.401)
C2: (22.097,110.717,127.595)
OP1: (20.573,105.033,125.642)
OP2: (18.213,104.380,126.378)
C4: (23.743,109.169,127.076)
O5': (19.027,106.772,126.431)
C3': (18.318,109.641,126.106)
C1': (19.750,110.040,127.926)
O4': (19.034,108.838,128.173)
C5': (17.779,107.280,126.896)
P: (19.129,105.347,125.731)
O2: (21.733,111.866,127.855)
C4': (17.927,108.729,127.254)
C2': (19.009,110.792,126.821)
O2': (18.122,111.706,127.428)
N1: (21.151,109.700,127.599)
N3: (23.385,110.426,127.317)
N4: (25.025,108.924,126.858)
C6: (21.524,108.415,127.317)
C5: (22.799,108.108,127.061)
O3': (17.178,110.042,125.368)
OP1: (20.573,105.033,125.642)
OP2: (18.213,104.380,126.378)
C4: (23.743,109.169,127.076)
O5': (19.027,106.772,126.431)
C3': (18.318,109.641,126.106)
C1': (19.750,110.040,127.926)
O4': (19.034,108.838,128.173)
C5': (17.779,107.280,126.896)
P: (19.129,105.347,125.731)
O2: (21.733,111.866,127.855)
C4': (17.927,108.729,127.254)
C2': (19.009,110.792,126.821)
O2': (18.122,111.706,127.428)
N1: (21.151,109.700,127.599)
N3: (23.385,110.426,127.317)
N4: (25.025,108.924,126.858)
C6: (21.524,108.415,127.317)
C5: (22.799,108.108,127.061)
O3': (17.178,110.042,125.368)
Image (generated by PyMOL):