Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01273:01274
Extra
PDB:
ATOM 1 O3' A A1272 7.457 134.029 54.298 1.00 43.14 O
ATOM 2 P U A1273 6.450 134.830 53.338 1.00 43.92 P
ATOM 3 OP1 U A1273 5.070 134.538 53.784 1.00 43.02 O
ATOM 4 OP2 U A1273 6.833 134.593 51.913 1.00 44.45 O
ATOM 5 O5' U A1273 6.757 136.350 53.675 1.00 43.21 O
ATOM 6 C5' U A1273 8.098 136.863 53.625 1.00 42.53 C
ATOM 7 C4' U A1273 8.067 138.358 53.765 1.00 42.46 C
ATOM 8 O4' U A1273 9.419 138.871 53.897 1.00 43.29 O
ATOM 9 C3' U A1273 7.441 139.089 52.585 1.00 43.17 C
ATOM 10 O3' U A1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 11 C2' U A1273 8.664 139.511 51.779 1.00 43.02 C
ATOM 12 O2' U A1273 8.424 140.639 50.962 1.00 40.58 O
ATOM 13 C1' U A1273 9.645 139.843 52.902 1.00 42.44 C
ATOM 14 N1 U A1273 11.068 139.833 52.522 1.00 39.56 N
ATOM 15 C2 U A1273 11.724 141.052 52.504 1.00 39.45 C
ATOM 16 O2 U A1273 11.186 142.102 52.825 1.00 41.79 O
ATOM 17 N3 U A1273 13.034 141.000 52.106 1.00 38.84 N
ATOM 18 C4 U A1273 13.747 139.877 51.745 1.00 40.89 C
ATOM 19 O4 U A1273 14.928 139.996 51.403 1.00 42.37 O
ATOM 20 C5 U A1273 13.007 138.651 51.807 1.00 38.45 C
ATOM 21 C6 U A1273 11.724 138.672 52.183 1.00 38.23 C
ATOM 22 P G A1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 23 OP1 G A1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 24 OP2 G A1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 25 O5' G A1274 4.430 139.604 53.889 1.00 44.98 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
ATOM 2 P U A1273 6.450 134.830 53.338 1.00 43.92 P
ATOM 3 OP1 U A1273 5.070 134.538 53.784 1.00 43.02 O
ATOM 4 OP2 U A1273 6.833 134.593 51.913 1.00 44.45 O
ATOM 5 O5' U A1273 6.757 136.350 53.675 1.00 43.21 O
ATOM 6 C5' U A1273 8.098 136.863 53.625 1.00 42.53 C
ATOM 7 C4' U A1273 8.067 138.358 53.765 1.00 42.46 C
ATOM 8 O4' U A1273 9.419 138.871 53.897 1.00 43.29 O
ATOM 9 C3' U A1273 7.441 139.089 52.585 1.00 43.17 C
ATOM 10 O3' U A1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 11 C2' U A1273 8.664 139.511 51.779 1.00 43.02 C
ATOM 12 O2' U A1273 8.424 140.639 50.962 1.00 40.58 O
ATOM 13 C1' U A1273 9.645 139.843 52.902 1.00 42.44 C
ATOM 14 N1 U A1273 11.068 139.833 52.522 1.00 39.56 N
ATOM 15 C2 U A1273 11.724 141.052 52.504 1.00 39.45 C
ATOM 16 O2 U A1273 11.186 142.102 52.825 1.00 41.79 O
ATOM 17 N3 U A1273 13.034 141.000 52.106 1.00 38.84 N
ATOM 18 C4 U A1273 13.747 139.877 51.745 1.00 40.89 C
ATOM 19 O4 U A1273 14.928 139.996 51.403 1.00 42.37 O
ATOM 20 C5 U A1273 13.007 138.651 51.807 1.00 38.45 C
ATOM 21 C6 U A1273 11.724 138.672 52.183 1.00 38.23 C
ATOM 22 P G A1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 23 OP1 G A1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 24 OP2 G A1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 25 O5' G A1274 4.430 139.604 53.889 1.00 44.98 O
TER
ATOM 1 O3' U B1273 6.749 140.241 53.057 1.00 45.61 O
ATOM 2 P G B1274 5.177 140.422 52.745 1.00 45.17 P
ATOM 3 OP1 G B1274 4.863 139.772 51.452 1.00 43.44 O
ATOM 4 OP2 G B1274 4.883 141.858 52.941 1.00 44.79 O
ATOM 5 O5' G B1274 4.430 139.604 53.889 1.00 44.98 O
ATOM 6 C5' G B1274 4.589 139.943 55.281 1.00 46.22 C
ATOM 7 C4' G B1274 3.839 138.947 56.139 1.00 49.83 C
ATOM 8 O4' G B1274 2.425 139.024 55.804 1.00 52.24 O
ATOM 9 C3' G B1274 4.237 137.483 55.938 1.00 48.90 C
ATOM 10 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 11 C2' G B1274 3.260 137.037 54.861 1.00 50.83 C
ATOM 12 O2' G B1274 3.052 135.641 54.857 1.00 50.46 O
ATOM 13 C1' G B1274 1.996 137.777 55.302 1.00 54.24 C
ATOM 14 N9 G B1274 1.025 138.014 54.239 1.00 57.86 N
ATOM 15 C8 G B1274 1.255 138.555 52.994 1.00 58.46 C
ATOM 16 N7 G B1274 0.184 138.592 52.249 1.00 60.10 N
ATOM 17 C5 G B1274 -0.814 138.055 53.054 1.00 59.03 C
ATOM 18 C6 G B1274 -2.182 137.826 52.787 1.00 58.62 C
ATOM 19 O6 G B1274 -2.809 138.044 51.742 1.00 60.02 O
ATOM 20 N1 G B1274 -2.831 137.273 53.886 1.00 58.47 N
ATOM 21 C2 G B1274 -2.238 136.968 55.086 1.00 57.73 C
ATOM 22 N2 G B1274 -3.032 136.437 56.027 1.00 56.11 N
ATOM 23 N3 G B1274 -0.962 137.167 55.343 1.00 58.62 N
ATOM 24 C4 G B1274 -0.313 137.708 54.289 1.00 58.59 C
ATOM 25 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 26 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 27 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 28 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
TER
Atoms:
C4: (13.747,139.877,51.745)
N3: (13.034,141.000,52.106)
OP1: (5.070,134.538,53.784)
OP2: (6.833,134.593,51.913)
C2: (11.724,141.052,52.504)
C1': (9.645,139.843,52.902)
C3': (7.441,139.089,52.585)
O5': (6.757,136.350,53.675)
O4': (9.419,138.871,53.897)
C5': (8.098,136.863,53.625)
P: (6.450,134.830,53.338)
C4': (8.067,138.358,53.765)
C2': (8.664,139.511,51.779)
O2': (8.424,140.639,50.962)
N1: (11.068,139.833,52.522)
O4: (14.928,139.996,51.403)
O2: (11.186,142.102,52.825)
C6: (11.724,138.672,52.183)
C5: (13.007,138.651,51.807)
O3': (6.749,140.241,53.057)
N3: (13.034,141.000,52.106)
OP1: (5.070,134.538,53.784)
OP2: (6.833,134.593,51.913)
C2: (11.724,141.052,52.504)
C1': (9.645,139.843,52.902)
C3': (7.441,139.089,52.585)
O5': (6.757,136.350,53.675)
O4': (9.419,138.871,53.897)
C5': (8.098,136.863,53.625)
P: (6.450,134.830,53.338)
C4': (8.067,138.358,53.765)
C2': (8.664,139.511,51.779)
O2': (8.424,140.639,50.962)
N1: (11.068,139.833,52.522)
O4: (14.928,139.996,51.403)
O2: (11.186,142.102,52.825)
C6: (11.724,138.672,52.183)
C5: (13.007,138.651,51.807)
O3': (6.749,140.241,53.057)
OP1: (4.863,139.772,51.452)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
OP2: (4.883,141.858,52.941)
C3': (4.237,137.483,55.938)
C1': (1.996,137.777,55.302)
C5': (4.589,139.943,55.281)
O6: (-2.809,138.044,51.742)
O4': (2.425,139.024,55.804)
C8: (1.255,138.555,52.994)
C2: (-2.238,136.968,55.086)
C6: (-2.182,137.826,52.787)
C5: (-0.814,138.055,53.054)
C4: (-0.313,137.708,54.289)
P: (5.177,140.422,52.745)
C4': (3.839,138.947,56.139)
C2': (3.260,137.037,54.861)
O2': (3.052,135.641,54.857)
N1: (-2.831,137.273,53.886)
N2: (-3.032,136.437,56.027)
N3: (-0.962,137.167,55.343)
N7: (0.184,138.592,52.249)
N9: (1.025,138.014,54.239)
O5': (4.430,139.604,53.889)
O3': (3.946,136.719,57.109)
Image (generated by PyMOL):