ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02417:02395

Extra

PDB:
ATOM 1 O3' C A2416 53.393 116.647 142.905 1.00 43.03 O
ATOM 2 P A A2417 53.424 117.001 141.337 1.00 43.85 P
ATOM 3 OP1 A A2417 52.029 116.949 140.836 1.00 43.88 O
ATOM 4 OP2 A A2417 54.469 116.177 140.682 1.00 43.30 O
ATOM 5 O5' A A2417 53.932 118.507 141.299 1.00 42.76 O
ATOM 6 C5' A A2417 53.159 119.561 141.878 1.00 41.42 C
ATOM 7 C4' A A2417 53.986 120.816 141.949 1.00 43.01 C
ATOM 8 O4' A A2417 55.158 120.554 142.765 1.00 44.03 O
ATOM 9 C3' A A2417 54.574 121.304 140.634 1.00 44.00 C
ATOM 10 O3' A A2417 53.614 122.047 139.879 1.00 46.32 O
ATOM 11 C2' A A2417 55.741 122.158 141.118 1.00 42.59 C
ATOM 12 O2' A A2417 55.306 123.406 141.618 1.00 39.85 O
ATOM 13 C1' A A2417 56.253 121.323 142.293 1.00 41.42 C
ATOM 14 N9 A A2417 57.346 120.408 141.961 1.00 40.48 N
ATOM 15 C8 A A2417 57.256 119.090 141.577 1.00 40.24 C
ATOM 16 N7 A A2417 58.416 118.525 141.347 1.00 37.09 N
ATOM 17 C5 A A2417 59.332 119.534 141.594 1.00 37.20 C
ATOM 18 C6 A A2417 60.727 119.571 141.525 1.00 37.69 C
ATOM 19 N6 A A2417 61.476 118.518 141.181 1.00 39.56 N
ATOM 20 N1 A A2417 61.341 120.735 141.828 1.00 36.33 N
ATOM 21 C2 A A2417 60.592 121.779 142.189 1.00 36.78 C
ATOM 22 N3 A A2417 59.272 121.868 142.300 1.00 38.42 N
ATOM 23 C4 A A2417 58.691 120.699 141.978 1.00 39.00 C
ATOM 24 P A A2418 53.624 121.974 138.267 1.00 46.57 P
ATOM 25 OP1 A A2418 52.412 122.672 137.764 1.00 46.88 O
ATOM 26 OP2 A A2418 53.874 120.566 137.871 1.00 45.37 O
ATOM 27 O5' A A2418 54.877 122.857 137.845 1.00 43.99 O
TER

ATOM 1 O3' A B2394 62.878 114.865 135.606 1.00 42.92 O
ATOM 2 P U B2395 62.871 115.602 137.033 1.00 45.17 P
ATOM 3 OP1 U B2395 64.123 115.198 137.718 1.00 44.66 O
ATOM 4 OP2 U B2395 61.563 115.358 137.699 1.00 46.14 O
ATOM 5 O5' U B2395 62.984 117.150 136.675 1.00 43.84 O
ATOM 6 C5' U B2395 64.115 117.657 135.941 1.00 42.64 C
ATOM 7 C4' U B2395 64.805 118.747 136.732 1.00 42.52 C
ATOM 8 O4' U B2395 63.914 119.887 136.881 1.00 41.72 O
ATOM 9 C3' U B2395 65.229 118.364 138.144 1.00 42.32 C
ATOM 10 O3' U B2395 66.339 119.163 138.490 1.00 44.72 O
ATOM 11 C2' U B2395 64.037 118.817 138.974 1.00 42.12 C
ATOM 12 O2' U B2395 64.358 119.074 140.327 1.00 42.86 O
ATOM 13 C1' U B2395 63.648 120.107 138.251 1.00 39.33 C
ATOM 14 N1 U B2395 62.229 120.467 138.385 1.00 37.24 N
ATOM 15 C2 U B2395 61.922 121.780 138.705 1.00 36.35 C
ATOM 16 O2 U B2395 62.772 122.644 138.872 1.00 37.16 O
ATOM 17 N3 U B2395 60.582 122.047 138.821 1.00 33.31 N
ATOM 18 C4 U B2395 59.544 121.161 138.655 1.00 33.53 C
ATOM 19 O4 U B2395 58.396 121.532 138.884 1.00 34.61 O
ATOM 20 C5 U B2395 59.937 119.832 138.316 1.00 33.84 C
ATOM 21 C6 U B2395 61.232 119.534 138.198 1.00 34.29 C
ATOM 22 P C B2396 67.781 118.497 138.657 1.00 47.30 P
ATOM 23 OP1 C B2396 68.299 118.088 137.329 1.00 50.00 O
ATOM 24 OP2 C B2396 67.658 117.486 139.733 1.00 49.72 O
ATOM 25 O5' C B2396 68.638 119.730 139.171 1.00 45.43 O
TER

Atoms:
OP1: (52.029,116.949,140.836)
OP2: (54.469,116.177,140.682)
C3': (54.574,121.304,140.634)
C1': (56.253,121.323,142.293)
C5': (53.159,119.561,141.878)
O4': (55.158,120.554,142.765)
C8: (57.256,119.090,141.577)
O2': (55.306,123.406,141.618)
C6: (60.727,119.571,141.525)
C5: (59.332,119.534,141.594)
C4: (58.691,120.699,141.978)
P: (53.424,117.001,141.337)
C4': (53.986,120.816,141.949)
C2': (55.741,122.158,141.118)
C2: (60.592,121.779,142.189)
N1: (61.341,120.735,141.828)
N3: (59.272,121.868,142.300)
N6: (61.476,118.518,141.181)
N7: (58.416,118.525,141.347)
N9: (57.346,120.408,141.961)
O5': (53.932,118.507,141.299)
O3': (53.614,122.047,139.879)
C4: (59.544,121.161,138.655)
N3: (60.582,122.047,138.821)
OP1: (64.123,115.198,137.718)
OP2: (61.563,115.358,137.699)
C2: (61.922,121.780,138.705)
C1': (63.648,120.107,138.251)
C3': (65.229,118.364,138.144)
O5': (62.984,117.150,136.675)
O4': (63.914,119.887,136.881)
C5': (64.115,117.657,135.941)
P: (62.871,115.602,137.033)
C4': (64.805,118.747,136.732)
C2': (64.037,118.817,138.974)
O2': (64.358,119.074,140.327)
N1: (62.229,120.467,138.385)
O4: (58.396,121.532,138.884)
O2: (62.772,122.644,138.872)
C6: (61.232,119.534,138.198)
C5: (59.937,119.832,138.316)
O3': (66.339,119.163,138.490)
Image (generated by PyMOL):
PyMOL image
show in jmol