Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A44:A59
Extra
PDB:
ATOM 1 O3' C A 43 63.890 160.709 44.194 1.00 41.70 O
ATOM 2 P G A 44 62.461 161.410 44.078 1.00 41.82 P
ATOM 3 OP1 G A 44 62.369 162.276 45.267 1.00 41.89 O
ATOM 4 OP2 G A 44 61.443 160.343 43.865 1.00 41.92 O
ATOM 5 O5' G A 44 62.626 162.273 42.748 1.00 43.93 O
ATOM 6 C5' G A 44 61.499 162.828 42.049 1.00 47.81 C
ATOM 7 C4' G A 44 61.777 162.832 40.560 1.00 50.11 C
ATOM 8 O4' G A 44 62.259 161.525 40.164 1.00 50.41 O
ATOM 9 C3' G A 44 60.565 163.110 39.683 1.00 51.12 C
ATOM 10 O3' G A 44 60.426 164.501 39.462 1.00 50.66 O
ATOM 11 C2' G A 44 60.868 162.324 38.416 1.00 52.23 C
ATOM 12 O2' G A 44 61.759 163.001 37.550 1.00 55.05 O
ATOM 13 C1' G A 44 61.573 161.097 39.000 1.00 52.10 C
ATOM 14 N9 G A 44 60.679 160.010 39.390 1.00 52.11 N
ATOM 15 C8 G A 44 60.573 159.450 40.639 1.00 52.44 C
ATOM 16 N7 G A 44 59.710 158.475 40.692 1.00 53.43 N
ATOM 17 C5 G A 44 59.209 158.388 39.399 1.00 51.78 C
ATOM 18 C6 G A 44 58.235 157.512 38.849 1.00 50.53 C
ATOM 19 O6 G A 44 57.602 156.610 39.418 1.00 47.52 O
ATOM 20 N1 G A 44 58.024 157.769 37.499 1.00 49.49 N
ATOM 21 C2 G A 44 58.661 158.741 36.773 1.00 50.82 C
ATOM 22 N2 G A 44 58.323 158.823 35.478 1.00 53.33 N
ATOM 23 N3 G A 44 59.565 159.569 37.275 1.00 51.55 N
ATOM 24 C4 G A 44 59.791 159.335 38.585 1.00 51.88 C
ATOM 25 P U A 45 59.052 165.219 39.834 1.00 51.44 P
ATOM 26 OP1 U A 45 59.224 166.687 39.707 1.00 52.22 O
ATOM 27 OP2 U A 45 58.601 164.645 41.127 1.00 52.44 O
ATOM 28 O5' U A 45 58.081 164.744 38.674 1.00 49.87 O
TER
ATOM 1 O3' U B 58 56.213 164.041 27.077 1.00 52.32 O
ATOM 2 P A B 59 55.360 164.391 28.379 1.00 51.32 P
ATOM 3 OP1 A B 59 54.031 164.916 27.964 1.00 52.64 O
ATOM 4 OP2 A B 59 56.245 165.244 29.198 1.00 52.04 O
ATOM 5 O5' A B 59 55.156 162.965 29.058 1.00 50.94 O
ATOM 6 C5' A B 59 56.294 162.179 29.410 1.00 52.33 C
ATOM 7 C4' A B 59 55.918 161.019 30.313 1.00 53.65 C
ATOM 8 O4' A B 59 57.190 160.521 30.821 1.00 53.93 O
ATOM 9 C3' A B 59 55.079 161.349 31.557 1.00 53.54 C
ATOM 10 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 11 C2' A B 59 55.756 160.549 32.658 1.00 54.03 C
ATOM 12 O2' A B 59 55.335 159.206 32.643 1.00 52.66 O
ATOM 13 C1' A B 59 57.215 160.629 32.228 1.00 54.87 C
ATOM 14 N9 A B 59 57.888 161.885 32.577 1.00 56.20 N
ATOM 15 C8 A B 59 57.652 163.147 32.077 1.00 55.84 C
ATOM 16 N7 A B 59 58.449 164.068 32.567 1.00 56.76 N
ATOM 17 C5 A B 59 59.260 163.373 33.457 1.00 57.35 C
ATOM 18 C6 A B 59 60.306 163.781 34.306 1.00 57.10 C
ATOM 19 N6 A B 59 60.725 165.042 34.416 1.00 57.03 N
ATOM 20 N1 A B 59 60.908 162.837 35.059 1.00 58.04 N
ATOM 21 C2 A B 59 60.473 161.576 34.980 1.00 57.77 C
ATOM 22 N3 A B 59 59.495 161.066 34.232 1.00 57.72 N
ATOM 23 C4 A B 59 58.922 162.027 33.480 1.00 57.53 C
ATOM 24 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 25 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 26 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 27 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
TER
ATOM 2 P G A 44 62.461 161.410 44.078 1.00 41.82 P
ATOM 3 OP1 G A 44 62.369 162.276 45.267 1.00 41.89 O
ATOM 4 OP2 G A 44 61.443 160.343 43.865 1.00 41.92 O
ATOM 5 O5' G A 44 62.626 162.273 42.748 1.00 43.93 O
ATOM 6 C5' G A 44 61.499 162.828 42.049 1.00 47.81 C
ATOM 7 C4' G A 44 61.777 162.832 40.560 1.00 50.11 C
ATOM 8 O4' G A 44 62.259 161.525 40.164 1.00 50.41 O
ATOM 9 C3' G A 44 60.565 163.110 39.683 1.00 51.12 C
ATOM 10 O3' G A 44 60.426 164.501 39.462 1.00 50.66 O
ATOM 11 C2' G A 44 60.868 162.324 38.416 1.00 52.23 C
ATOM 12 O2' G A 44 61.759 163.001 37.550 1.00 55.05 O
ATOM 13 C1' G A 44 61.573 161.097 39.000 1.00 52.10 C
ATOM 14 N9 G A 44 60.679 160.010 39.390 1.00 52.11 N
ATOM 15 C8 G A 44 60.573 159.450 40.639 1.00 52.44 C
ATOM 16 N7 G A 44 59.710 158.475 40.692 1.00 53.43 N
ATOM 17 C5 G A 44 59.209 158.388 39.399 1.00 51.78 C
ATOM 18 C6 G A 44 58.235 157.512 38.849 1.00 50.53 C
ATOM 19 O6 G A 44 57.602 156.610 39.418 1.00 47.52 O
ATOM 20 N1 G A 44 58.024 157.769 37.499 1.00 49.49 N
ATOM 21 C2 G A 44 58.661 158.741 36.773 1.00 50.82 C
ATOM 22 N2 G A 44 58.323 158.823 35.478 1.00 53.33 N
ATOM 23 N3 G A 44 59.565 159.569 37.275 1.00 51.55 N
ATOM 24 C4 G A 44 59.791 159.335 38.585 1.00 51.88 C
ATOM 25 P U A 45 59.052 165.219 39.834 1.00 51.44 P
ATOM 26 OP1 U A 45 59.224 166.687 39.707 1.00 52.22 O
ATOM 27 OP2 U A 45 58.601 164.645 41.127 1.00 52.44 O
ATOM 28 O5' U A 45 58.081 164.744 38.674 1.00 49.87 O
TER
ATOM 1 O3' U B 58 56.213 164.041 27.077 1.00 52.32 O
ATOM 2 P A B 59 55.360 164.391 28.379 1.00 51.32 P
ATOM 3 OP1 A B 59 54.031 164.916 27.964 1.00 52.64 O
ATOM 4 OP2 A B 59 56.245 165.244 29.198 1.00 52.04 O
ATOM 5 O5' A B 59 55.156 162.965 29.058 1.00 50.94 O
ATOM 6 C5' A B 59 56.294 162.179 29.410 1.00 52.33 C
ATOM 7 C4' A B 59 55.918 161.019 30.313 1.00 53.65 C
ATOM 8 O4' A B 59 57.190 160.521 30.821 1.00 53.93 O
ATOM 9 C3' A B 59 55.079 161.349 31.557 1.00 53.54 C
ATOM 10 O3' A B 59 53.702 160.952 31.461 1.00 52.28 O
ATOM 11 C2' A B 59 55.756 160.549 32.658 1.00 54.03 C
ATOM 12 O2' A B 59 55.335 159.206 32.643 1.00 52.66 O
ATOM 13 C1' A B 59 57.215 160.629 32.228 1.00 54.87 C
ATOM 14 N9 A B 59 57.888 161.885 32.577 1.00 56.20 N
ATOM 15 C8 A B 59 57.652 163.147 32.077 1.00 55.84 C
ATOM 16 N7 A B 59 58.449 164.068 32.567 1.00 56.76 N
ATOM 17 C5 A B 59 59.260 163.373 33.457 1.00 57.35 C
ATOM 18 C6 A B 59 60.306 163.781 34.306 1.00 57.10 C
ATOM 19 N6 A B 59 60.725 165.042 34.416 1.00 57.03 N
ATOM 20 N1 A B 59 60.908 162.837 35.059 1.00 58.04 N
ATOM 21 C2 A B 59 60.473 161.576 34.980 1.00 57.77 C
ATOM 22 N3 A B 59 59.495 161.066 34.232 1.00 57.72 N
ATOM 23 C4 A B 59 58.922 162.027 33.480 1.00 57.53 C
ATOM 24 P A B 60 52.691 161.268 32.687 1.00 53.28 P
ATOM 25 OP1 A B 60 52.027 162.574 32.450 1.00 53.45 O
ATOM 26 OP2 A B 60 53.391 161.037 33.970 1.00 53.17 O
ATOM 27 O5' A B 60 51.552 160.166 32.566 1.00 54.30 O
TER
Atoms:
OP1: (62.369,162.276,45.267)
OP2: (61.443,160.343,43.865)
C3': (60.565,163.110,39.683)
C1': (61.573,161.097,39.000)
C5': (61.499,162.828,42.049)
O6: (57.602,156.610,39.418)
O4': (62.259,161.525,40.164)
C8: (60.573,159.450,40.639)
C2: (58.661,158.741,36.773)
C6: (58.235,157.512,38.849)
C5: (59.209,158.388,39.399)
C4: (59.791,159.335,38.585)
P: (62.461,161.410,44.078)
C4': (61.777,162.832,40.560)
C2': (60.868,162.324,38.416)
O2': (61.759,163.001,37.550)
N1: (58.024,157.769,37.499)
N2: (58.323,158.823,35.478)
N3: (59.565,159.569,37.275)
N7: (59.710,158.475,40.692)
N9: (60.679,160.010,39.390)
O5': (62.626,162.273,42.748)
O3': (60.426,164.501,39.462)
OP2: (61.443,160.343,43.865)
C3': (60.565,163.110,39.683)
C1': (61.573,161.097,39.000)
C5': (61.499,162.828,42.049)
O6: (57.602,156.610,39.418)
O4': (62.259,161.525,40.164)
C8: (60.573,159.450,40.639)
C2: (58.661,158.741,36.773)
C6: (58.235,157.512,38.849)
C5: (59.209,158.388,39.399)
C4: (59.791,159.335,38.585)
P: (62.461,161.410,44.078)
C4': (61.777,162.832,40.560)
C2': (60.868,162.324,38.416)
O2': (61.759,163.001,37.550)
N1: (58.024,157.769,37.499)
N2: (58.323,158.823,35.478)
N3: (59.565,159.569,37.275)
N7: (59.710,158.475,40.692)
N9: (60.679,160.010,39.390)
O5': (62.626,162.273,42.748)
O3': (60.426,164.501,39.462)
OP1: (54.031,164.916,27.964)
OP2: (56.245,165.244,29.198)
C3': (55.079,161.349,31.557)
C1': (57.215,160.629,32.228)
C5': (56.294,162.179,29.410)
O4': (57.190,160.521,30.821)
C8: (57.652,163.147,32.077)
O2': (55.335,159.206,32.643)
C6: (60.306,163.781,34.306)
C5: (59.260,163.373,33.457)
C4: (58.922,162.027,33.480)
P: (55.360,164.391,28.379)
C4': (55.918,161.019,30.313)
C2': (55.756,160.549,32.658)
C2: (60.473,161.576,34.980)
N1: (60.908,162.837,35.059)
N3: (59.495,161.066,34.232)
N6: (60.725,165.042,34.416)
N7: (58.449,164.068,32.567)
N9: (57.888,161.885,32.577)
O5': (55.156,162.965,29.058)
O3': (53.702,160.952,31.461)
OP2: (56.245,165.244,29.198)
C3': (55.079,161.349,31.557)
C1': (57.215,160.629,32.228)
C5': (56.294,162.179,29.410)
O4': (57.190,160.521,30.821)
C8: (57.652,163.147,32.077)
O2': (55.335,159.206,32.643)
C6: (60.306,163.781,34.306)
C5: (59.260,163.373,33.457)
C4: (58.922,162.027,33.480)
P: (55.360,164.391,28.379)
C4': (55.918,161.019,30.313)
C2': (55.756,160.549,32.658)
C2: (60.473,161.576,34.980)
N1: (60.908,162.837,35.059)
N3: (59.495,161.066,34.232)
N6: (60.725,165.042,34.416)
N7: (58.449,164.068,32.567)
N9: (57.888,161.885,32.577)
O5': (55.156,162.965,29.058)
O3': (53.702,160.952,31.461)
Image (generated by PyMOL):