Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01108:01109
Extra
PDB:
ATOM 1 O3' C A1107 35.600 75.751 172.357 1.00 71.52 O
ATOM 2 P U A1108 34.603 74.587 172.851 1.00 69.56 P
ATOM 3 OP1 U A1108 35.437 73.557 173.505 1.00 69.50 O
ATOM 4 OP2 U A1108 33.717 74.201 171.725 1.00 69.27 O
ATOM 5 O5' U A1108 33.725 75.287 173.982 1.00 70.64 O
ATOM 6 C5' U A1108 33.175 76.607 173.792 1.00 72.78 C
ATOM 7 C4' U A1108 32.158 76.902 174.868 1.00 74.53 C
ATOM 8 O4' U A1108 31.698 78.281 174.762 1.00 75.29 O
ATOM 9 C3' U A1108 30.904 76.036 174.822 1.00 75.65 C
ATOM 10 O3' U A1108 30.442 75.831 176.150 1.00 77.65 O
ATOM 11 C2' U A1108 29.918 76.927 174.076 1.00 76.03 C
ATOM 12 O2' U A1108 28.563 76.623 174.344 1.00 77.37 O
ATOM 13 C1' U A1108 30.289 78.295 174.640 1.00 75.66 C
ATOM 14 N1 U A1108 29.882 79.438 173.806 1.00 75.92 N
ATOM 15 C2 U A1108 28.761 80.153 174.205 1.00 76.64 C
ATOM 16 O2 U A1108 28.097 79.865 175.191 1.00 77.86 O
ATOM 17 N3 U A1108 28.439 81.217 173.403 1.00 76.60 N
ATOM 18 C4 U A1108 29.095 81.627 172.266 1.00 77.00 C
ATOM 19 O4 U A1108 28.689 82.621 171.661 1.00 77.34 O
ATOM 20 C5 U A1108 30.231 80.830 171.911 1.00 76.22 C
ATOM 21 C6 U A1108 30.579 79.792 172.674 1.00 75.46 C
ATOM 22 P A A1109 30.442 74.355 176.775 1.00 79.40 P
ATOM 23 OP1 A A1109 30.063 73.387 175.710 1.00 79.59 O
ATOM 24 OP2 A A1109 29.643 74.424 178.027 1.00 79.70 O
ATOM 25 O5' A A1109 31.963 74.100 177.175 1.00 78.66 O
TER
ATOM 1 O3' U B1108 30.442 75.831 176.150 1.00 77.65 O
ATOM 2 P A B1109 30.442 74.355 176.775 1.00 79.40 P
ATOM 3 OP1 A B1109 30.063 73.387 175.710 1.00 79.59 O
ATOM 4 OP2 A B1109 29.643 74.424 178.027 1.00 79.70 O
ATOM 5 O5' A B1109 31.963 74.100 177.175 1.00 78.66 O
ATOM 6 C5' A B1109 32.568 74.823 178.262 1.00 77.32 C
ATOM 7 C4' A B1109 33.962 74.307 178.521 1.00 76.87 C
ATOM 8 O4' A B1109 33.888 72.918 178.941 1.00 77.96 O
ATOM 9 C3' A B1109 34.915 74.335 177.330 1.00 76.09 C
ATOM 10 O3' A B1109 36.247 74.523 177.801 1.00 73.89 O
ATOM 11 C2' A B1109 34.792 72.918 176.787 1.00 77.60 C
ATOM 12 O2' A B1109 35.928 72.500 176.061 1.00 79.68 O
ATOM 13 C1' A B1109 34.686 72.128 178.087 1.00 79.09 C
ATOM 14 N9 A B1109 34.081 70.803 177.964 1.00 81.48 N
ATOM 15 C8 A B1109 32.932 70.428 177.305 1.00 82.12 C
ATOM 16 N7 A B1109 32.679 69.142 177.377 1.00 82.60 N
ATOM 17 C5 A B1109 33.728 68.638 178.138 1.00 82.24 C
ATOM 18 C6 A B1109 34.042 67.342 178.574 1.00 82.28 C
ATOM 19 N6 A B1109 33.309 66.266 178.287 1.00 83.45 N
ATOM 20 N1 A B1109 35.154 67.183 179.322 1.00 82.17 N
ATOM 21 C2 A B1109 35.896 68.258 179.603 1.00 81.62 C
ATOM 22 N3 A B1109 35.710 69.524 179.249 1.00 82.03 N
ATOM 23 C4 A B1109 34.594 69.649 178.509 1.00 82.03 C
ATOM 24 P G B1110 36.844 76.007 177.945 1.00 71.98 P
ATOM 25 OP1 G B1110 38.299 75.954 177.679 1.00 71.44 O
ATOM 26 OP2 G B1110 36.356 76.567 179.221 1.00 73.51 O
ATOM 27 O5' G B1110 36.131 76.835 176.789 1.00 73.48 O
TER
ATOM 2 P U A1108 34.603 74.587 172.851 1.00 69.56 P
ATOM 3 OP1 U A1108 35.437 73.557 173.505 1.00 69.50 O
ATOM 4 OP2 U A1108 33.717 74.201 171.725 1.00 69.27 O
ATOM 5 O5' U A1108 33.725 75.287 173.982 1.00 70.64 O
ATOM 6 C5' U A1108 33.175 76.607 173.792 1.00 72.78 C
ATOM 7 C4' U A1108 32.158 76.902 174.868 1.00 74.53 C
ATOM 8 O4' U A1108 31.698 78.281 174.762 1.00 75.29 O
ATOM 9 C3' U A1108 30.904 76.036 174.822 1.00 75.65 C
ATOM 10 O3' U A1108 30.442 75.831 176.150 1.00 77.65 O
ATOM 11 C2' U A1108 29.918 76.927 174.076 1.00 76.03 C
ATOM 12 O2' U A1108 28.563 76.623 174.344 1.00 77.37 O
ATOM 13 C1' U A1108 30.289 78.295 174.640 1.00 75.66 C
ATOM 14 N1 U A1108 29.882 79.438 173.806 1.00 75.92 N
ATOM 15 C2 U A1108 28.761 80.153 174.205 1.00 76.64 C
ATOM 16 O2 U A1108 28.097 79.865 175.191 1.00 77.86 O
ATOM 17 N3 U A1108 28.439 81.217 173.403 1.00 76.60 N
ATOM 18 C4 U A1108 29.095 81.627 172.266 1.00 77.00 C
ATOM 19 O4 U A1108 28.689 82.621 171.661 1.00 77.34 O
ATOM 20 C5 U A1108 30.231 80.830 171.911 1.00 76.22 C
ATOM 21 C6 U A1108 30.579 79.792 172.674 1.00 75.46 C
ATOM 22 P A A1109 30.442 74.355 176.775 1.00 79.40 P
ATOM 23 OP1 A A1109 30.063 73.387 175.710 1.00 79.59 O
ATOM 24 OP2 A A1109 29.643 74.424 178.027 1.00 79.70 O
ATOM 25 O5' A A1109 31.963 74.100 177.175 1.00 78.66 O
TER
ATOM 1 O3' U B1108 30.442 75.831 176.150 1.00 77.65 O
ATOM 2 P A B1109 30.442 74.355 176.775 1.00 79.40 P
ATOM 3 OP1 A B1109 30.063 73.387 175.710 1.00 79.59 O
ATOM 4 OP2 A B1109 29.643 74.424 178.027 1.00 79.70 O
ATOM 5 O5' A B1109 31.963 74.100 177.175 1.00 78.66 O
ATOM 6 C5' A B1109 32.568 74.823 178.262 1.00 77.32 C
ATOM 7 C4' A B1109 33.962 74.307 178.521 1.00 76.87 C
ATOM 8 O4' A B1109 33.888 72.918 178.941 1.00 77.96 O
ATOM 9 C3' A B1109 34.915 74.335 177.330 1.00 76.09 C
ATOM 10 O3' A B1109 36.247 74.523 177.801 1.00 73.89 O
ATOM 11 C2' A B1109 34.792 72.918 176.787 1.00 77.60 C
ATOM 12 O2' A B1109 35.928 72.500 176.061 1.00 79.68 O
ATOM 13 C1' A B1109 34.686 72.128 178.087 1.00 79.09 C
ATOM 14 N9 A B1109 34.081 70.803 177.964 1.00 81.48 N
ATOM 15 C8 A B1109 32.932 70.428 177.305 1.00 82.12 C
ATOM 16 N7 A B1109 32.679 69.142 177.377 1.00 82.60 N
ATOM 17 C5 A B1109 33.728 68.638 178.138 1.00 82.24 C
ATOM 18 C6 A B1109 34.042 67.342 178.574 1.00 82.28 C
ATOM 19 N6 A B1109 33.309 66.266 178.287 1.00 83.45 N
ATOM 20 N1 A B1109 35.154 67.183 179.322 1.00 82.17 N
ATOM 21 C2 A B1109 35.896 68.258 179.603 1.00 81.62 C
ATOM 22 N3 A B1109 35.710 69.524 179.249 1.00 82.03 N
ATOM 23 C4 A B1109 34.594 69.649 178.509 1.00 82.03 C
ATOM 24 P G B1110 36.844 76.007 177.945 1.00 71.98 P
ATOM 25 OP1 G B1110 38.299 75.954 177.679 1.00 71.44 O
ATOM 26 OP2 G B1110 36.356 76.567 179.221 1.00 73.51 O
ATOM 27 O5' G B1110 36.131 76.835 176.789 1.00 73.48 O
TER
Atoms:
C4: (29.095,81.627,172.266)
N3: (28.439,81.217,173.403)
OP1: (35.437,73.557,173.505)
OP2: (33.717,74.201,171.725)
C2: (28.761,80.153,174.205)
C1': (30.289,78.295,174.640)
C3': (30.904,76.036,174.822)
O5': (33.725,75.287,173.982)
O4': (31.698,78.281,174.762)
C5': (33.175,76.607,173.792)
P: (34.603,74.587,172.851)
C4': (32.158,76.902,174.868)
C2': (29.918,76.927,174.076)
O2': (28.563,76.623,174.344)
N1: (29.882,79.438,173.806)
O4: (28.689,82.621,171.661)
O2: (28.097,79.865,175.191)
C6: (30.579,79.792,172.674)
C5: (30.231,80.830,171.911)
O3': (30.442,75.831,176.150)
N3: (28.439,81.217,173.403)
OP1: (35.437,73.557,173.505)
OP2: (33.717,74.201,171.725)
C2: (28.761,80.153,174.205)
C1': (30.289,78.295,174.640)
C3': (30.904,76.036,174.822)
O5': (33.725,75.287,173.982)
O4': (31.698,78.281,174.762)
C5': (33.175,76.607,173.792)
P: (34.603,74.587,172.851)
C4': (32.158,76.902,174.868)
C2': (29.918,76.927,174.076)
O2': (28.563,76.623,174.344)
N1: (29.882,79.438,173.806)
O4: (28.689,82.621,171.661)
O2: (28.097,79.865,175.191)
C6: (30.579,79.792,172.674)
C5: (30.231,80.830,171.911)
O3': (30.442,75.831,176.150)
OP1: (30.063,73.387,175.710)
OP2: (29.643,74.424,178.027)
C3': (34.915,74.335,177.330)
C1': (34.686,72.128,178.087)
C5': (32.568,74.823,178.262)
O4': (33.888,72.918,178.941)
C8: (32.932,70.428,177.305)
O2': (35.928,72.500,176.061)
C6: (34.042,67.342,178.574)
C5: (33.728,68.638,178.138)
C4: (34.594,69.649,178.509)
P: (30.442,74.355,176.775)
C4': (33.962,74.307,178.521)
C2': (34.792,72.918,176.787)
C2: (35.896,68.258,179.603)
N1: (35.154,67.183,179.322)
N3: (35.710,69.524,179.249)
N6: (33.309,66.266,178.287)
N7: (32.679,69.142,177.377)
N9: (34.081,70.803,177.964)
O5': (31.963,74.100,177.175)
O3': (36.247,74.523,177.801)
OP2: (29.643,74.424,178.027)
C3': (34.915,74.335,177.330)
C1': (34.686,72.128,178.087)
C5': (32.568,74.823,178.262)
O4': (33.888,72.918,178.941)
C8: (32.932,70.428,177.305)
O2': (35.928,72.500,176.061)
C6: (34.042,67.342,178.574)
C5: (33.728,68.638,178.138)
C4: (34.594,69.649,178.509)
P: (30.442,74.355,176.775)
C4': (33.962,74.307,178.521)
C2': (34.792,72.918,176.787)
C2: (35.896,68.258,179.603)
N1: (35.154,67.183,179.322)
N3: (35.710,69.524,179.249)
N6: (33.309,66.266,178.287)
N7: (32.679,69.142,177.377)
N9: (34.081,70.803,177.964)
O5': (31.963,74.100,177.175)
O3': (36.247,74.523,177.801)
Image (generated by PyMOL):