Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01273:01274
Extra
PDB:
ATOM 1 O3' A A1272 7.706 134.292 54.538 1.00 53.34 O
ATOM 2 P U A1273 6.727 135.103 53.560 1.00 53.63 P
ATOM 3 OP1 U A1273 5.327 134.803 53.944 1.00 52.04 O
ATOM 4 OP2 U A1273 7.173 134.880 52.155 1.00 53.67 O
ATOM 5 O5' U A1273 7.034 136.617 53.933 1.00 52.79 O
ATOM 6 C5' U A1273 8.380 137.122 53.892 1.00 53.48 C
ATOM 7 C4' U A1273 8.358 138.619 54.001 1.00 53.92 C
ATOM 8 O4' U A1273 9.712 139.151 54.107 1.00 54.57 O
ATOM 9 C3' U A1273 7.726 139.305 52.804 1.00 54.96 C
ATOM 10 O3' U A1273 7.021 140.452 53.259 1.00 57.89 O
ATOM 11 C2' U A1273 8.942 139.716 51.982 1.00 53.89 C
ATOM 12 O2' U A1273 8.666 140.801 51.125 1.00 53.33 O
ATOM 13 C1' U A1273 9.916 140.111 53.092 1.00 52.64 C
ATOM 14 N1 U A1273 11.341 140.132 52.717 1.00 49.85 N
ATOM 15 C2 U A1273 11.997 141.358 52.723 1.00 50.06 C
ATOM 16 O2 U A1273 11.465 142.407 53.062 1.00 54.01 O
ATOM 17 N3 U A1273 13.305 141.317 52.325 1.00 47.87 N
ATOM 18 C4 U A1273 14.018 140.210 51.944 1.00 49.16 C
ATOM 19 O4 U A1273 15.194 140.337 51.603 1.00 50.40 O
ATOM 20 C5 U A1273 13.284 138.985 51.983 1.00 49.17 C
ATOM 21 C6 U A1273 12.004 138.989 52.359 1.00 48.40 C
ATOM 22 P G A1274 5.462 140.616 52.915 1.00 58.55 P
ATOM 23 OP1 G A1274 5.213 139.949 51.611 1.00 56.16 O
ATOM 24 OP2 G A1274 5.139 142.055 53.080 1.00 57.96 O
ATOM 25 O5' G A1274 4.713 139.795 54.058 1.00 59.23 O
TER
ATOM 1 O3' U B1273 7.021 140.452 53.259 1.00 57.89 O
ATOM 2 P G B1274 5.462 140.616 52.915 1.00 58.55 P
ATOM 3 OP1 G B1274 5.213 139.949 51.611 1.00 56.16 O
ATOM 4 OP2 G B1274 5.139 142.055 53.080 1.00 57.96 O
ATOM 5 O5' G B1274 4.713 139.795 54.058 1.00 59.23 O
ATOM 6 C5' G B1274 4.785 140.204 55.446 1.00 61.97 C
ATOM 7 C4' G B1274 4.031 139.221 56.325 1.00 63.14 C
ATOM 8 O4' G B1274 2.622 139.263 55.970 1.00 65.92 O
ATOM 9 C3' G B1274 4.451 137.757 56.186 1.00 62.38 C
ATOM 10 O3' G B1274 4.124 137.026 57.374 1.00 60.56 O
ATOM 11 C2' G B1274 3.508 137.272 55.095 1.00 63.96 C
ATOM 12 O2' G B1274 3.339 135.870 55.091 1.00 62.27 O
ATOM 13 C1' G B1274 2.218 137.995 55.495 1.00 67.39 C
ATOM 14 N9 G B1274 1.256 138.196 54.414 1.00 71.38 N
ATOM 15 C8 G B1274 1.508 138.711 53.161 1.00 72.17 C
ATOM 16 N7 G B1274 0.452 138.732 52.395 1.00 73.50 N
ATOM 17 C5 G B1274 -0.560 138.209 53.189 1.00 73.01 C
ATOM 18 C6 G B1274 -1.921 137.977 52.894 1.00 73.52 C
ATOM 19 O6 G B1274 -2.522 138.176 51.828 1.00 74.60 O
ATOM 20 N1 G B1274 -2.598 137.444 53.989 1.00 73.52 N
ATOM 21 C2 G B1274 -2.032 137.159 55.208 1.00 72.17 C
ATOM 22 N2 G B1274 -2.853 136.642 56.138 1.00 70.36 N
ATOM 23 N3 G B1274 -0.757 137.363 55.491 1.00 71.79 N
ATOM 24 C4 G B1274 -0.085 137.887 54.443 1.00 71.76 C
ATOM 25 P G B1275 5.134 136.986 58.624 1.00 56.74 P
ATOM 26 OP1 G B1275 4.931 135.659 59.265 1.00 55.32 O
ATOM 27 OP2 G B1275 4.964 138.221 59.419 1.00 53.76 O
ATOM 28 O5' G B1275 6.581 137.016 57.974 1.00 56.81 O
TER
ATOM 2 P U A1273 6.727 135.103 53.560 1.00 53.63 P
ATOM 3 OP1 U A1273 5.327 134.803 53.944 1.00 52.04 O
ATOM 4 OP2 U A1273 7.173 134.880 52.155 1.00 53.67 O
ATOM 5 O5' U A1273 7.034 136.617 53.933 1.00 52.79 O
ATOM 6 C5' U A1273 8.380 137.122 53.892 1.00 53.48 C
ATOM 7 C4' U A1273 8.358 138.619 54.001 1.00 53.92 C
ATOM 8 O4' U A1273 9.712 139.151 54.107 1.00 54.57 O
ATOM 9 C3' U A1273 7.726 139.305 52.804 1.00 54.96 C
ATOM 10 O3' U A1273 7.021 140.452 53.259 1.00 57.89 O
ATOM 11 C2' U A1273 8.942 139.716 51.982 1.00 53.89 C
ATOM 12 O2' U A1273 8.666 140.801 51.125 1.00 53.33 O
ATOM 13 C1' U A1273 9.916 140.111 53.092 1.00 52.64 C
ATOM 14 N1 U A1273 11.341 140.132 52.717 1.00 49.85 N
ATOM 15 C2 U A1273 11.997 141.358 52.723 1.00 50.06 C
ATOM 16 O2 U A1273 11.465 142.407 53.062 1.00 54.01 O
ATOM 17 N3 U A1273 13.305 141.317 52.325 1.00 47.87 N
ATOM 18 C4 U A1273 14.018 140.210 51.944 1.00 49.16 C
ATOM 19 O4 U A1273 15.194 140.337 51.603 1.00 50.40 O
ATOM 20 C5 U A1273 13.284 138.985 51.983 1.00 49.17 C
ATOM 21 C6 U A1273 12.004 138.989 52.359 1.00 48.40 C
ATOM 22 P G A1274 5.462 140.616 52.915 1.00 58.55 P
ATOM 23 OP1 G A1274 5.213 139.949 51.611 1.00 56.16 O
ATOM 24 OP2 G A1274 5.139 142.055 53.080 1.00 57.96 O
ATOM 25 O5' G A1274 4.713 139.795 54.058 1.00 59.23 O
TER
ATOM 1 O3' U B1273 7.021 140.452 53.259 1.00 57.89 O
ATOM 2 P G B1274 5.462 140.616 52.915 1.00 58.55 P
ATOM 3 OP1 G B1274 5.213 139.949 51.611 1.00 56.16 O
ATOM 4 OP2 G B1274 5.139 142.055 53.080 1.00 57.96 O
ATOM 5 O5' G B1274 4.713 139.795 54.058 1.00 59.23 O
ATOM 6 C5' G B1274 4.785 140.204 55.446 1.00 61.97 C
ATOM 7 C4' G B1274 4.031 139.221 56.325 1.00 63.14 C
ATOM 8 O4' G B1274 2.622 139.263 55.970 1.00 65.92 O
ATOM 9 C3' G B1274 4.451 137.757 56.186 1.00 62.38 C
ATOM 10 O3' G B1274 4.124 137.026 57.374 1.00 60.56 O
ATOM 11 C2' G B1274 3.508 137.272 55.095 1.00 63.96 C
ATOM 12 O2' G B1274 3.339 135.870 55.091 1.00 62.27 O
ATOM 13 C1' G B1274 2.218 137.995 55.495 1.00 67.39 C
ATOM 14 N9 G B1274 1.256 138.196 54.414 1.00 71.38 N
ATOM 15 C8 G B1274 1.508 138.711 53.161 1.00 72.17 C
ATOM 16 N7 G B1274 0.452 138.732 52.395 1.00 73.50 N
ATOM 17 C5 G B1274 -0.560 138.209 53.189 1.00 73.01 C
ATOM 18 C6 G B1274 -1.921 137.977 52.894 1.00 73.52 C
ATOM 19 O6 G B1274 -2.522 138.176 51.828 1.00 74.60 O
ATOM 20 N1 G B1274 -2.598 137.444 53.989 1.00 73.52 N
ATOM 21 C2 G B1274 -2.032 137.159 55.208 1.00 72.17 C
ATOM 22 N2 G B1274 -2.853 136.642 56.138 1.00 70.36 N
ATOM 23 N3 G B1274 -0.757 137.363 55.491 1.00 71.79 N
ATOM 24 C4 G B1274 -0.085 137.887 54.443 1.00 71.76 C
ATOM 25 P G B1275 5.134 136.986 58.624 1.00 56.74 P
ATOM 26 OP1 G B1275 4.931 135.659 59.265 1.00 55.32 O
ATOM 27 OP2 G B1275 4.964 138.221 59.419 1.00 53.76 O
ATOM 28 O5' G B1275 6.581 137.016 57.974 1.00 56.81 O
TER
Atoms:
C4: (14.018,140.210,51.944)
N3: (13.305,141.317,52.325)
OP1: (5.327,134.803,53.944)
OP2: (7.173,134.880,52.155)
C2: (11.997,141.358,52.723)
C1': (9.916,140.111,53.092)
C3': (7.726,139.305,52.804)
O5': (7.034,136.617,53.933)
O4': (9.712,139.151,54.107)
C5': (8.380,137.122,53.892)
P: (6.727,135.103,53.560)
C4': (8.358,138.619,54.001)
C2': (8.942,139.716,51.982)
O2': (8.666,140.801,51.125)
N1: (11.341,140.132,52.717)
O4: (15.194,140.337,51.603)
O2: (11.465,142.407,53.062)
C6: (12.004,138.989,52.359)
C5: (13.284,138.985,51.983)
O3': (7.021,140.452,53.259)
N3: (13.305,141.317,52.325)
OP1: (5.327,134.803,53.944)
OP2: (7.173,134.880,52.155)
C2: (11.997,141.358,52.723)
C1': (9.916,140.111,53.092)
C3': (7.726,139.305,52.804)
O5': (7.034,136.617,53.933)
O4': (9.712,139.151,54.107)
C5': (8.380,137.122,53.892)
P: (6.727,135.103,53.560)
C4': (8.358,138.619,54.001)
C2': (8.942,139.716,51.982)
O2': (8.666,140.801,51.125)
N1: (11.341,140.132,52.717)
O4: (15.194,140.337,51.603)
O2: (11.465,142.407,53.062)
C6: (12.004,138.989,52.359)
C5: (13.284,138.985,51.983)
O3': (7.021,140.452,53.259)
OP1: (5.213,139.949,51.611)
OP2: (5.139,142.055,53.080)
C3': (4.451,137.757,56.186)
C1': (2.218,137.995,55.495)
C5': (4.785,140.204,55.446)
O6: (-2.522,138.176,51.828)
O4': (2.622,139.263,55.970)
C8: (1.508,138.711,53.161)
C2: (-2.032,137.159,55.208)
C6: (-1.921,137.977,52.894)
C5: (-0.560,138.209,53.189)
C4: (-0.085,137.887,54.443)
P: (5.462,140.616,52.915)
C4': (4.031,139.221,56.325)
C2': (3.508,137.272,55.095)
O2': (3.339,135.870,55.091)
N1: (-2.598,137.444,53.989)
N2: (-2.853,136.642,56.138)
N3: (-0.757,137.363,55.491)
N7: (0.452,138.732,52.395)
N9: (1.256,138.196,54.414)
O5': (4.713,139.795,54.058)
O3': (4.124,137.026,57.374)
OP2: (5.139,142.055,53.080)
C3': (4.451,137.757,56.186)
C1': (2.218,137.995,55.495)
C5': (4.785,140.204,55.446)
O6: (-2.522,138.176,51.828)
O4': (2.622,139.263,55.970)
C8: (1.508,138.711,53.161)
C2: (-2.032,137.159,55.208)
C6: (-1.921,137.977,52.894)
C5: (-0.560,138.209,53.189)
C4: (-0.085,137.887,54.443)
P: (5.462,140.616,52.915)
C4': (4.031,139.221,56.325)
C2': (3.508,137.272,55.095)
O2': (3.339,135.870,55.091)
N1: (-2.598,137.444,53.989)
N2: (-2.853,136.642,56.138)
N3: (-0.757,137.363,55.491)
N7: (0.452,138.732,52.395)
N9: (1.256,138.196,54.414)
O5': (4.713,139.795,54.058)
O3': (4.124,137.026,57.374)
Image (generated by PyMOL):