Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01067:01061
Extra
PDB:
ATOM 1 O3' A A1066 11.411 104.464 120.792 1.00 43.01 O
ATOM 2 P G A1067 10.843 105.341 122.010 1.00 44.09 P
ATOM 3 OP1 G A1067 9.681 104.560 122.498 1.00 44.47 O
ATOM 4 OP2 G A1067 10.663 106.765 121.615 1.00 42.51 O
ATOM 5 O5' G A1067 11.987 105.269 123.109 1.00 40.59 O
ATOM 6 C5' G A1067 12.598 104.018 123.423 1.00 41.15 C
ATOM 7 C4' G A1067 12.611 103.806 124.914 1.00 41.98 C
ATOM 8 O4' G A1067 13.051 102.456 125.190 1.00 40.64 O
ATOM 9 C3' G A1067 13.545 104.721 125.694 1.00 42.44 C
ATOM 10 O3' G A1067 13.067 104.844 127.022 1.00 45.02 O
ATOM 11 C2' G A1067 14.814 103.893 125.761 1.00 41.87 C
ATOM 12 O2' G A1067 15.589 104.257 126.880 1.00 43.79 O
ATOM 13 C1' G A1067 14.228 102.497 125.952 1.00 40.71 C
ATOM 14 N9 G A1067 15.058 101.375 125.542 1.00 40.62 N
ATOM 15 C8 G A1067 16.393 101.377 125.234 1.00 42.04 C
ATOM 16 N7 G A1067 16.861 100.184 124.986 1.00 43.95 N
ATOM 17 C5 G A1067 15.762 99.350 125.123 1.00 43.29 C
ATOM 18 C6 G A1067 15.654 97.935 125.011 1.00 43.71 C
ATOM 19 O6 G A1067 16.546 97.106 124.772 1.00 44.90 O
ATOM 20 N1 G A1067 14.348 97.508 125.223 1.00 43.34 N
ATOM 21 C2 G A1067 13.286 98.329 125.508 1.00 43.60 C
ATOM 22 N2 G A1067 12.101 97.733 125.657 1.00 45.17 N
ATOM 23 N3 G A1067 13.377 99.639 125.634 1.00 42.55 N
ATOM 24 C4 G A1067 14.635 100.077 125.434 1.00 42.32 C
ATOM 25 P U A1068 11.862 105.843 127.357 1.00 48.47 P
ATOM 26 OP1 U A1068 10.713 104.961 127.649 1.00 48.18 O
ATOM 27 OP2 U A1068 11.731 106.900 126.314 1.00 45.87 O
ATOM 28 O5' U A1068 12.342 106.509 128.719 1.00 49.22 O
TER
ATOM 1 O3' U B1060 18.564 105.406 123.874 1.00 45.47 O
ATOM 2 P C B1061 19.002 105.123 125.386 1.00 44.99 P
ATOM 3 OP1 C B1061 20.414 104.679 125.381 1.00 46.98 O
ATOM 4 OP2 C B1061 17.968 104.236 125.960 1.00 44.20 O
ATOM 5 O5' C B1061 18.938 106.560 126.070 1.00 41.73 O
ATOM 6 C5' C B1061 17.707 107.077 126.590 1.00 41.01 C
ATOM 7 C4' C B1061 17.863 108.535 126.924 1.00 41.62 C
ATOM 8 O4' C B1061 18.971 108.680 127.844 1.00 41.96 O
ATOM 9 C3' C B1061 18.240 109.434 125.761 1.00 42.83 C
ATOM 10 O3' C B1061 17.101 109.823 125.001 1.00 46.11 O
ATOM 11 C2' C B1061 18.917 110.603 126.461 1.00 41.60 C
ATOM 12 O2' C B1061 18.012 111.501 127.068 1.00 41.15 O
ATOM 13 C1' C B1061 19.683 109.875 127.560 1.00 40.37 C
ATOM 14 N1 C B1061 21.070 109.520 127.189 1.00 39.95 N
ATOM 15 C2 C B1061 22.036 110.530 127.141 1.00 39.81 C
ATOM 16 O2 C B1061 21.702 111.693 127.396 1.00 41.53 O
ATOM 17 N3 C B1061 23.309 110.212 126.826 1.00 39.08 N
ATOM 18 C4 C B1061 23.639 108.947 126.585 1.00 38.09 C
ATOM 19 N4 C B1061 24.915 108.678 126.323 1.00 38.61 N
ATOM 20 C5 C B1061 22.678 107.901 126.612 1.00 38.39 C
ATOM 21 C6 C B1061 21.416 108.227 126.908 1.00 38.79 C
ATOM 22 P C B1062 17.282 110.245 123.465 1.00 47.67 P
ATOM 23 OP1 C B1062 15.940 110.397 122.860 1.00 47.09 O
ATOM 24 OP2 C B1062 18.253 109.296 122.861 1.00 48.40 O
ATOM 25 O5' C B1062 17.952 111.684 123.559 1.00 43.85 O
TER
ATOM 2 P G A1067 10.843 105.341 122.010 1.00 44.09 P
ATOM 3 OP1 G A1067 9.681 104.560 122.498 1.00 44.47 O
ATOM 4 OP2 G A1067 10.663 106.765 121.615 1.00 42.51 O
ATOM 5 O5' G A1067 11.987 105.269 123.109 1.00 40.59 O
ATOM 6 C5' G A1067 12.598 104.018 123.423 1.00 41.15 C
ATOM 7 C4' G A1067 12.611 103.806 124.914 1.00 41.98 C
ATOM 8 O4' G A1067 13.051 102.456 125.190 1.00 40.64 O
ATOM 9 C3' G A1067 13.545 104.721 125.694 1.00 42.44 C
ATOM 10 O3' G A1067 13.067 104.844 127.022 1.00 45.02 O
ATOM 11 C2' G A1067 14.814 103.893 125.761 1.00 41.87 C
ATOM 12 O2' G A1067 15.589 104.257 126.880 1.00 43.79 O
ATOM 13 C1' G A1067 14.228 102.497 125.952 1.00 40.71 C
ATOM 14 N9 G A1067 15.058 101.375 125.542 1.00 40.62 N
ATOM 15 C8 G A1067 16.393 101.377 125.234 1.00 42.04 C
ATOM 16 N7 G A1067 16.861 100.184 124.986 1.00 43.95 N
ATOM 17 C5 G A1067 15.762 99.350 125.123 1.00 43.29 C
ATOM 18 C6 G A1067 15.654 97.935 125.011 1.00 43.71 C
ATOM 19 O6 G A1067 16.546 97.106 124.772 1.00 44.90 O
ATOM 20 N1 G A1067 14.348 97.508 125.223 1.00 43.34 N
ATOM 21 C2 G A1067 13.286 98.329 125.508 1.00 43.60 C
ATOM 22 N2 G A1067 12.101 97.733 125.657 1.00 45.17 N
ATOM 23 N3 G A1067 13.377 99.639 125.634 1.00 42.55 N
ATOM 24 C4 G A1067 14.635 100.077 125.434 1.00 42.32 C
ATOM 25 P U A1068 11.862 105.843 127.357 1.00 48.47 P
ATOM 26 OP1 U A1068 10.713 104.961 127.649 1.00 48.18 O
ATOM 27 OP2 U A1068 11.731 106.900 126.314 1.00 45.87 O
ATOM 28 O5' U A1068 12.342 106.509 128.719 1.00 49.22 O
TER
ATOM 1 O3' U B1060 18.564 105.406 123.874 1.00 45.47 O
ATOM 2 P C B1061 19.002 105.123 125.386 1.00 44.99 P
ATOM 3 OP1 C B1061 20.414 104.679 125.381 1.00 46.98 O
ATOM 4 OP2 C B1061 17.968 104.236 125.960 1.00 44.20 O
ATOM 5 O5' C B1061 18.938 106.560 126.070 1.00 41.73 O
ATOM 6 C5' C B1061 17.707 107.077 126.590 1.00 41.01 C
ATOM 7 C4' C B1061 17.863 108.535 126.924 1.00 41.62 C
ATOM 8 O4' C B1061 18.971 108.680 127.844 1.00 41.96 O
ATOM 9 C3' C B1061 18.240 109.434 125.761 1.00 42.83 C
ATOM 10 O3' C B1061 17.101 109.823 125.001 1.00 46.11 O
ATOM 11 C2' C B1061 18.917 110.603 126.461 1.00 41.60 C
ATOM 12 O2' C B1061 18.012 111.501 127.068 1.00 41.15 O
ATOM 13 C1' C B1061 19.683 109.875 127.560 1.00 40.37 C
ATOM 14 N1 C B1061 21.070 109.520 127.189 1.00 39.95 N
ATOM 15 C2 C B1061 22.036 110.530 127.141 1.00 39.81 C
ATOM 16 O2 C B1061 21.702 111.693 127.396 1.00 41.53 O
ATOM 17 N3 C B1061 23.309 110.212 126.826 1.00 39.08 N
ATOM 18 C4 C B1061 23.639 108.947 126.585 1.00 38.09 C
ATOM 19 N4 C B1061 24.915 108.678 126.323 1.00 38.61 N
ATOM 20 C5 C B1061 22.678 107.901 126.612 1.00 38.39 C
ATOM 21 C6 C B1061 21.416 108.227 126.908 1.00 38.79 C
ATOM 22 P C B1062 17.282 110.245 123.465 1.00 47.67 P
ATOM 23 OP1 C B1062 15.940 110.397 122.860 1.00 47.09 O
ATOM 24 OP2 C B1062 18.253 109.296 122.861 1.00 48.40 O
ATOM 25 O5' C B1062 17.952 111.684 123.559 1.00 43.85 O
TER
Atoms:
OP1: (9.681,104.560,122.498)
OP2: (10.663,106.765,121.615)
C3': (13.545,104.721,125.694)
C1': (14.228,102.497,125.952)
C5': (12.598,104.018,123.423)
O6: (16.546,97.106,124.772)
O4': (13.051,102.456,125.190)
C8: (16.393,101.377,125.234)
C2: (13.286,98.329,125.508)
C6: (15.654,97.935,125.011)
C5: (15.762,99.350,125.123)
C4: (14.635,100.077,125.434)
P: (10.843,105.341,122.010)
C4': (12.611,103.806,124.914)
C2': (14.814,103.893,125.761)
O2': (15.589,104.257,126.880)
N1: (14.348,97.508,125.223)
N2: (12.101,97.733,125.657)
N3: (13.377,99.639,125.634)
N7: (16.861,100.184,124.986)
N9: (15.058,101.375,125.542)
O5': (11.987,105.269,123.109)
O3': (13.067,104.844,127.022)
OP2: (10.663,106.765,121.615)
C3': (13.545,104.721,125.694)
C1': (14.228,102.497,125.952)
C5': (12.598,104.018,123.423)
O6: (16.546,97.106,124.772)
O4': (13.051,102.456,125.190)
C8: (16.393,101.377,125.234)
C2: (13.286,98.329,125.508)
C6: (15.654,97.935,125.011)
C5: (15.762,99.350,125.123)
C4: (14.635,100.077,125.434)
P: (10.843,105.341,122.010)
C4': (12.611,103.806,124.914)
C2': (14.814,103.893,125.761)
O2': (15.589,104.257,126.880)
N1: (14.348,97.508,125.223)
N2: (12.101,97.733,125.657)
N3: (13.377,99.639,125.634)
N7: (16.861,100.184,124.986)
N9: (15.058,101.375,125.542)
O5': (11.987,105.269,123.109)
O3': (13.067,104.844,127.022)
C2: (22.036,110.530,127.141)
OP1: (20.414,104.679,125.381)
OP2: (17.968,104.236,125.960)
C4: (23.639,108.947,126.585)
O5': (18.938,106.560,126.070)
C3': (18.240,109.434,125.761)
C1': (19.683,109.875,127.560)
O4': (18.971,108.680,127.844)
C5': (17.707,107.077,126.590)
P: (19.002,105.123,125.386)
O2: (21.702,111.693,127.396)
C4': (17.863,108.535,126.924)
C2': (18.917,110.603,126.461)
O2': (18.012,111.501,127.068)
N1: (21.070,109.520,127.189)
N3: (23.309,110.212,126.826)
N4: (24.915,108.678,126.323)
C6: (21.416,108.227,126.908)
C5: (22.678,107.901,126.612)
O3': (17.101,109.823,125.001)
OP1: (20.414,104.679,125.381)
OP2: (17.968,104.236,125.960)
C4: (23.639,108.947,126.585)
O5': (18.938,106.560,126.070)
C3': (18.240,109.434,125.761)
C1': (19.683,109.875,127.560)
O4': (18.971,108.680,127.844)
C5': (17.707,107.077,126.590)
P: (19.002,105.123,125.386)
O2: (21.702,111.693,127.396)
C4': (17.863,108.535,126.924)
C2': (18.917,110.603,126.461)
O2': (18.012,111.501,127.068)
N1: (21.070,109.520,127.189)
N3: (23.309,110.212,126.826)
N4: (24.915,108.678,126.323)
C6: (21.416,108.227,126.908)
C5: (22.678,107.901,126.612)
O3': (17.101,109.823,125.001)
Image (generated by PyMOL):